RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 TBC1D32Q96NH3 1257 aa9.54□□□□□ -0.88
C11orf54-202ENST00000354421 CENPJQ9HC77 1338 aaPredicted RBP9.54□□□□□ -0.88
C11orf54-202ENST00000354421 ADGRB2O60241 1585 aa9.54□□□□□ -0.88
C11orf54-202ENST00000354421 TRPM2O94759 1503 aa9.54□□□□□ -0.88
C11orf54-202ENST00000354421 DLL1O00548 723 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 APBA3O96018 575 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 TATDN2Q93075 761 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 RRAGDQ9NQL2 400 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-202ENST00000354421 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.53□□□□□ -0.88
C11orf54-202ENST00000354421 MAP3K5Q99683 1374 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 CEP152O94986 1710 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 FSD2A1L4K1 749 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 ZBTB7AO95365 584 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 ZNF526Q8TF50 670 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-202ENST00000354421 PNMA3Q9UL41 463 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 POLR3AO14802 1390 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-202ENST00000354421 RREB1Q92766 1687 aa9.53□□□□□ -0.88
C11orf54-202ENST00000354421 NUP188Q5SRE5 1749 aa9.52□□□□□ -0.89
C11orf54-202ENST00000354421 HTRA3P83110 453 aa9.52□□□□□ -0.89
C11orf54-202ENST00000354421 UPF2Q9HAU5 1272 aaKnown RBP9.52□□□□□ -0.89
C11orf54-202ENST00000354421 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
C11orf54-202ENST00000354421 TMEM2Q9UHN6 1383 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 SMAPO00193 183 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 GGCXP38435 758 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 VPS72Q15906 364 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 PCNTO95613 3336 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 WWC1Q8IX03 1113 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 ABHD8Q96I13 439 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 TBC1D2Q9BYX2 928 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
C11orf54-202ENST00000354421 SLIT2O94813 1529 aa9.5□□□□□ -0.89
C11orf54-202ENST00000354421 TOMM70O94826 608 aa9.5□□□□□ -0.89
C11orf54-202ENST00000354421 RARSP54136 660 aaKnown RBP9.5□□□□□ -0.89
C11orf54-202ENST00000354421 TREML4Q6UXN2 200 aa9.5□□□□□ -0.89
C11orf54-202ENST00000354421 PANK1Q8TE04 598 aa9.5□□□□□ -0.89
C11orf54-202ENST00000354421 SLKQ9H2G2 1235 aaPredicted RBP9.5□□□□□ -0.89
C11orf54-202ENST00000354421 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
C11orf54-202ENST00000354421 ERVK-7P63135 1459 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 CLTCL1P53675 1640 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 KANK1Q14678 1352 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 GOLGA6L3A6NEY3 463 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 GRIN3BO60391 1043 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 MCM4P33991 863 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 FAM182BQ5T319 152 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 PDZRN3Q9UPQ7 1066 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 ARIH1Q9Y4X5 557 aaPredicted RBP9.49□□□□□ -0.89
C11orf54-202ENST00000354421 MYOM2P54296 1465 aa9.49□□□□□ -0.89
C11orf54-202ENST00000354421 TRIM37O94972 964 aa9.48□□□□□ -0.89
C11orf54-202ENST00000354421 XRCC6P12956 609 aaKnown RBP eCLIP9.48□□□□□ -0.89
C11orf54-202ENST00000354421 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
C11orf54-202ENST00000354421 WDR63Q8IWG1 891 aa9.48□□□□□ -0.89
C11orf54-202ENST00000354421 RWDD1Q9H446 243 aaPredicted RBP9.48□□□□□ -0.89
C11orf54-202ENST00000354421 CASZ1Q86V15 1759 aa9.48□□□□□ -0.89
C11orf54-202ENST00000354421 CLCN1P35523 988 aa9.48□□□□□ -0.89
C11orf54-202ENST00000354421 MPNDQ8N594 471 aa9.48□□□□□ -0.89
C11orf54-202ENST00000354421 PRDM10Q9NQV6 1147 aa9.48□□□□□ -0.89
C11orf54-202ENST00000354421 CHMP5Q9NZZ3 219 aa9.48□□□□□ -0.89
C11orf54-202ENST00000354421 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
C11orf54-202ENST00000354421 ADCY9O60503 1353 aa9.47□□□□□ -0.89
C11orf54-202ENST00000354421 COL22A1Q8NFW1 1626 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-202ENST00000354421 DCCP43146 1447 aa9.47□□□□□ -0.89
C11orf54-202ENST00000354421 CCDC27Q2M243 656 aa9.47□□□□□ -0.89
C11orf54-202ENST00000354421 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-202ENST00000354421 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
C11orf54-202ENST00000354421 ISY1Q9ULR0 285 aaKnown RBP9.47□□□□□ -0.89
C11orf54-202ENST00000354421 SOS2Q07890 1332 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-202ENST00000354421 SBNO2Q9Y2G9 1366 aa9.47□□□□□ -0.89
C11orf54-202ENST00000354421 MST1RQ04912 1400 aa9.46□□□□□ -0.89
C11orf54-202ENST00000354421 ZNF516Q92618 1163 aa9.46□□□□□ -0.89
C11orf54-202ENST00000354421 RUNDC1Q96C34 613 aa9.46□□□□□ -0.89
C11orf54-202ENST00000354421 ARXQ96QS3 562 aa9.46□□□□□ -0.89
C11orf54-202ENST00000354421 TMUB1Q9BVT8 246 aa9.46□□□□□ -0.89
C11orf54-202ENST00000354421 PDGFDQ9GZP0 370 aaPredicted RBP9.46□□□□□ -0.89
C11orf54-202ENST00000354421 RNF40O75150 1001 aa9.45□□□□□ -0.9
C11orf54-202ENST00000354421 MRE11P49959 708 aa9.45□□□□□ -0.9
C11orf54-202ENST00000354421 E2F4Q16254 413 aa9.45□□□□□ -0.9
C11orf54-202ENST00000354421 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
C11orf54-202ENST00000354421 CCDC9Q9Y3X0 531 aaKnown RBP9.45□□□□□ -0.9
C11orf54-202ENST00000354421 MARF1Q9Y4F3 1742 aaKnown RBP9.45□□□□□ -0.9
C11orf54-202ENST00000354421 USP32Q8NFA0 1604 aa9.45□□□□□ -0.9
C11orf54-202ENST00000354421 GRXCR2A6NFK2 248 aa9.45□□□□□ -0.9
C11orf54-202ENST00000354421 RLBP1P12271 317 aa9.45□□□□□ -0.9
C11orf54-202ENST00000354421 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
C11orf54-202ENST00000354421 CHD2O14647 1828 aaKnown RBP9.44□□□□□ -0.9
C11orf54-202ENST00000354421 KIF3BO15066 747 aa9.44□□□□□ -0.9
C11orf54-202ENST00000354421 TRAK2O60296 914 aa9.44□□□□□ -0.9
C11orf54-202ENST00000354421 PNNQ9H307 717 aaKnown RBP9.44□□□□□ -0.9
C11orf54-202ENST00000354421 INO80Q9ULG1 1556 aaPredicted RBP9.44□□□□□ -0.9
C11orf54-202ENST00000354421 DDX11L8A8MPP1 907 aa9.43□□□□□ -0.9
C11orf54-202ENST00000354421 CT47B1P0C2W7 299 aaPredicted RBP9.43□□□□□ -0.9
C11orf54-202ENST00000354421 PRR14Q9BWN1 585 aa9.43□□□□□ -0.9
C11orf54-202ENST00000354421 DDIT3P35638 169 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 MVPQ14764 893 aaKnown RBP9.42□□□□□ -0.9
C11orf54-202ENST00000354421 GLIPR1L2Q4G1C9 344 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 TCP11L2Q8N4U5 519 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 C22orf23Q9BZE7 217 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms