RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 C16orf45Q96MC5 204 aaPredicted RBP21.31■■□□□ 1
APP-202ENST00000348990 PTGS1P23219 599 aa21.31■■□□□ 1
APP-202ENST00000348990 HSPA4P34932 840 aa21.31■■□□□ 1
APP-202ENST00000348990 JAKMIP1Q96N16 626 aaKnown RBP21.31■■□□□ 1
APP-202ENST00000348990 SNX14Q9Y5W7 946 aa21.31■■□□□ 1
APP-202ENST00000348990 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
APP-202ENST00000348990 FAM173BQ6P4H8 233 aa21.3■■□□□ 1
APP-202ENST00000348990 NECAB1Q8N987 351 aa21.3■■□□□ 1
APP-202ENST00000348990 TRIM5Q9C035 493 aa21.3■■□□□ 1
APP-202ENST00000348990 CCDC30Q5VVM6 783 aa21.3■■□□□ 1
APP-202ENST00000348990 MTHFSDQ2M296 383 aaKnown RBP21.29■■□□□ 1
APP-202ENST00000348990 RUFY3Q7L099 469 aa21.29■■□□□ 1
APP-202ENST00000348990 SRGAP3O43295 1099 aa21.29■■□□□ 1
APP-202ENST00000348990 ZNF771Q7L3S4 317 aaPredicted RBP21.29■■□□□ 1
APP-202ENST00000348990 CNTROBQ8N137 903 aa21.29■■□□□ 1
APP-202ENST00000348990 MAP2P11137 1827 aaKnown RBP21.29■■□□□ 1
APP-202ENST00000348990 PRPF40BQ6NWY9 871 aaKnown RBP21.28■■□□□ 1
APP-202ENST00000348990 LUZP1Q86V48 1076 aa21.28■■□□□ 1
APP-202ENST00000348990 KIAA1524Q8TCG1 905 aa21.28■■□□□ 1
APP-202ENST00000348990 PPP1R42Q7Z4L9 355 aa21.28■■□□□ 1
APP-202ENST00000348990 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
APP-202ENST00000348990 PDRG1Q9NUG6 133 aa21.28■■□□□ 1
APP-202ENST00000348990 LARGE1O95461 756 aa21.27■■□□□ 1
APP-202ENST00000348990 CCDC186Q7Z3E2 898 aa21.27■■□□□ 1
APP-202ENST00000348990 AP5Z1O43299 807 aa21.27■■□□□ 1
APP-202ENST00000348990 LARP1BQ659C4 914 aaKnown RBP21.27■■□□□ 1
APP-202ENST00000348990 TFIP11Q9UBB9 837 aaKnown RBP21.27■■□□□ 1
APP-202ENST00000348990 EDC4Q6P2E9 1401 aaKnown RBP21.27■■□□□ 1
APP-202ENST00000348990 KIAA0232Q92628 1395 aa21.27■■□□□ 1
APP-202ENST00000348990 AMPHP49418 695 aa21.27■□□□□ 0.99
APP-202ENST00000348990 NUP62CLQ9H1M0 184 aa21.26■□□□□ 0.99
APP-202ENST00000348990 KCNF1Q9H3M0 494 aa21.26■□□□□ 0.99
APP-202ENST00000348990 RPAP1Q9BWH6 1393 aaPredicted RBP21.26■□□□□ 0.99
APP-202ENST00000348990 CPSF1Q10570 1443 aaKnown RBP21.25■□□□□ 0.99
APP-202ENST00000348990 TPM3P06753 285 aa21.25■□□□□ 0.99
APP-202ENST00000348990 SGSM2O43147 1006 aa21.25■□□□□ 0.99
APP-202ENST00000348990 LRMPQ12912 555 aa21.25■□□□□ 0.99
APP-202ENST00000348990 SPTLC3Q9NUV7 552 aa21.25■□□□□ 0.99
APP-202ENST00000348990 MAP3K11Q16584 847 aa21.25■□□□□ 0.99
APP-202ENST00000348990 RHPN1Q8TCX5 695 aa21.25■□□□□ 0.99
APP-202ENST00000348990 TCEANC2Q96MN5 208 aa21.25■□□□□ 0.99
APP-202ENST00000348990 CYP46A1Q9Y6A2 500 aa21.24■□□□□ 0.99
APP-202ENST00000348990 TNMDQ9H2S6 317 aa21.24■□□□□ 0.99
APP-202ENST00000348990 TCHHQ07283 1943 aa21.24■□□□□ 0.99
APP-202ENST00000348990 RAD50Q92878 1312 aa21.24■□□□□ 0.99
APP-202ENST00000348990 CDK12Q9NYV4 1490 aaPredicted RBP21.24■□□□□ 0.99
APP-202ENST00000348990 TPD52L1Q16890 204 aaPredicted RBP21.23■□□□□ 0.99
APP-202ENST00000348990 STAP2Q9UGK3 403 aa21.23■□□□□ 0.99
APP-202ENST00000348990 KRT85P78386 507 aa21.23■□□□□ 0.99
APP-202ENST00000348990 TMEM87AQ8NBN3 555 aa21.23■□□□□ 0.99
APP-202ENST00000348990 GTF2F1P35269 517 aaKnown RBP eCLIP21.22■□□□□ 0.99
APP-202ENST00000348990 STK3Q13188 491 aa21.22■□□□□ 0.99
APP-202ENST00000348990 BICD2Q8TD16 824 aa21.22■□□□□ 0.99
APP-202ENST00000348990 UTP14CQ5TAP6 766 aaKnown RBP21.22■□□□□ 0.99
APP-202ENST00000348990 GTPBP4Q9BZE4 634 aaKnown RBP21.22■□□□□ 0.99
APP-202ENST00000348990 USP44Q9H0E7 712 aa21.22■□□□□ 0.99
APP-202ENST00000348990 SALL3Q9BXA9 1300 aa21.22■□□□□ 0.99
APP-202ENST00000348990 TNNT1P13805 278 aa21.22■□□□□ 0.99
APP-202ENST00000348990 ZKSCAN1P17029 563 aaPredicted RBP21.22■□□□□ 0.99
APP-202ENST00000348990 HDGFL1Q5TGJ6 251 aa21.22■□□□□ 0.99
APP-202ENST00000348990 MTMR6Q9Y217 621 aa21.22■□□□□ 0.99
APP-202ENST00000348990 FAM200AQ8TCP9 573 aa21.21■□□□□ 0.99
APP-202ENST00000348990 NRBP1Q9UHY1 535 aa21.21■□□□□ 0.99
APP-202ENST00000348990 AATKQ6ZMQ8 1374 aa21.21■□□□□ 0.99
APP-202ENST00000348990 TYRO3Q06418 890 aa21.21■□□□□ 0.99
APP-202ENST00000348990 ADCK5Q3MIX3 580 aa21.21■□□□□ 0.99
APP-202ENST00000348990 PHAXQ9H814 394 aaKnown RBP21.21■□□□□ 0.99
APP-202ENST00000348990 SOS1Q07889 1333 aaPredicted RBP21.21■□□□□ 0.99
APP-202ENST00000348990 YEATS2Q9ULM3 1422 aa21.21■□□□□ 0.99
APP-202ENST00000348990 ANO6Q4KMQ2 910 aa21.2■□□□□ 0.99
APP-202ENST00000348990 RUFY2Q8WXA3 655 aa21.2■□□□□ 0.99
APP-202ENST00000348990 DACT1Q9NYF0 836 aa21.2■□□□□ 0.99
APP-202ENST00000348990 MAP3K19Q56UN5 1328 aa21.2■□□□□ 0.98
APP-202ENST00000348990 LIG1P18858 919 aa21.2■□□□□ 0.98
APP-202ENST00000348990 MLH3Q9UHC1 1453 aa21.2■□□□□ 0.98
APP-202ENST00000348990 ATP7BP35670 1465 aa21.19■□□□□ 0.98
APP-202ENST00000348990 NAA30Q147X3 362 aaPredicted RBP21.19■□□□□ 0.98
APP-202ENST00000348990 SSH2Q76I76 1423 aa21.19■□□□□ 0.98
APP-202ENST00000348990 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
APP-202ENST00000348990 LSG1Q9H089 658 aaKnown RBP21.19■□□□□ 0.98
APP-202ENST00000348990 FRMPD1Q5SYB0 1578 aa21.19■□□□□ 0.98
APP-202ENST00000348990 NPHP1O15259 732 aa21.19■□□□□ 0.98
APP-202ENST00000348990 CCDC112Q8NEF3 446 aa21.19■□□□□ 0.98
APP-202ENST00000348990 FBXW7Q969H0 707 aa21.19■□□□□ 0.98
APP-202ENST00000348990 CDC42BPGQ6DT37 1551 aa21.18■□□□□ 0.98
APP-202ENST00000348990 TTC21BQ7Z4L5 1316 aa21.18■□□□□ 0.98
APP-202ENST00000348990 PTH1RQ03431 593 aa21.18■□□□□ 0.98
APP-202ENST00000348990 CEBPZQ03701 1054 aaKnown RBP21.18■□□□□ 0.98
APP-202ENST00000348990 NUTM2GQ5VZR2 741 aa21.18■□□□□ 0.98
APP-202ENST00000348990 TTC14Q96N46 770 aa21.18■□□□□ 0.98
APP-202ENST00000348990 HECW2Q9P2P5 1572 aa21.18■□□□□ 0.98
APP-202ENST00000348990 TTC6Q86TZ1 520 aa21.18■□□□□ 0.98
APP-202ENST00000348990 SPATA32Q96LK8 384 aa21.18■□□□□ 0.98
APP-202ENST00000348990 HYPKQ9NX55 129 aa21.18■□□□□ 0.98
APP-202ENST00000348990 FOSBP53539 338 aa21.17■□□□□ 0.98
APP-202ENST00000348990 PIK3C2BO00750 1634 aa21.17■□□□□ 0.98
APP-202ENST00000348990 RAB11FIP3O75154 756 aa21.17■□□□□ 0.98
APP-202ENST00000348990 IFIT2P09913 472 aaKnown RBP21.17■□□□□ 0.98
APP-202ENST00000348990 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.17■□□□□ 0.98
APP-202ENST00000348990 V9GYY5 206 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms