RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 C8orf34Q49A92 452 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 SHANK2Q9UPX8 1470 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 KIF3CO14782 793 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 CASQ1P31415 396 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 SH3BGRP55822 239 aaPredicted RBP8.97□□□□□ -0.97
LIN28B-201ENST00000345080 CCDC97Q96F63 343 aaPredicted RBP8.97□□□□□ -0.97
LIN28B-201ENST00000345080 PARD3Q8TEW0 1356 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 FYB1O15117 783 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 RFC1P35251 1148 aaPredicted RBP8.97□□□□□ -0.97
LIN28B-201ENST00000345080 SLC20A2Q08357 652 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 PTPRKQ15262 1439 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 NSD2O96028 1365 aa8.96□□□□□ -0.97
LIN28B-201ENST00000345080 ERCC3P19447 782 aa8.96□□□□□ -0.97
LIN28B-201ENST00000345080 MVPQ14764 893 aaKnown RBP8.96□□□□□ -0.97
LIN28B-201ENST00000345080 RPAINQ86UA6 219 aa8.96□□□□□ -0.97
LIN28B-201ENST00000345080 RSRC1Q96IZ7 334 aaKnown RBP8.96□□□□□ -0.97
LIN28B-201ENST00000345080 USP25Q9UHP3 1055 aa8.96□□□□□ -0.97
LIN28B-201ENST00000345080 DIAPH1O60610 1272 aaKnown RBP8.96□□□□□ -0.97
LIN28B-201ENST00000345080 BAG4O95429 457 aaKnown RBP8.96□□□□□ -0.97
LIN28B-201ENST00000345080 CCDC184Q52MB2 194 aa8.96□□□□□ -0.97
LIN28B-201ENST00000345080 CDCA7LQ96GN5 454 aa8.96□□□□□ -0.97
LIN28B-201ENST00000345080 KRBA2Q6ZNG9 492 aa8.96□□□□□ -0.98
LIN28B-201ENST00000345080 ADCY5O95622 1261 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 DAAM2Q86T65 1068 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 NBPF11Q86T75 865 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 SERPINA10Q9UK55 444 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 FAM184BQ9ULE4 1060 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 PARP3Q9Y6F1 533 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 ASXL2Q76L83 1435 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 HSP90AB4PQ58FF6 505 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 CEP83Q9Y592 693 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 CEP112Q8N8E3 955 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 CFAP74Q9C0B2 1584 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 ATP8B1O43520 1251 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 EIF5P55010 431 aaKnown RBP8.95□□□□□ -0.98
LIN28B-201ENST00000345080 TRIM29Q14134 588 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 ICE2Q659A1 982 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 ANKRD18AQ8IVF6 992 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 SMARCE1Q969G3 411 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 FMNL2Q96PY5 1086 aa8.95□□□□□ -0.98
LIN28B-201ENST00000345080 MPHOSPH6Q99547 160 aaKnown RBP8.95□□□□□ -0.98
LIN28B-201ENST00000345080 MAP2K1Q02750 393 aaPredicted RBP8.94□□□□□ -0.98
LIN28B-201ENST00000345080 CCDC150Q8NCX0 1101 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 GOLGA5Q8TBA6 731 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 MORC4Q8TE76 937 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 CCDC172P0C7W6 258 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 RBBP5Q15291 538 aaKnown RBP8.94□□□□□ -0.98
LIN28B-201ENST00000345080 CCDC38Q502W7 563 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 HSP90AB2PQ58FF8 381 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 DNMT1P26358 1616 aaKnown RBP8.94□□□□□ -0.98
LIN28B-201ENST00000345080 STARD3NLO95772 234 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 SSFA2P28290 1259 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 SEPT7Q16181 437 aaKnown RBP8.94□□□□□ -0.98
LIN28B-201ENST00000345080 FLAD1Q8NFF5 587 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 ARFGAP3Q9NP61 516 aa8.94□□□□□ -0.98
LIN28B-201ENST00000345080 MYO1BO43795 1136 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 PDE1CQ14123 709 aaPredicted RBP8.93□□□□□ -0.98
LIN28B-201ENST00000345080 MAP3K11Q16584 847 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.93□□□□□ -0.98
LIN28B-201ENST00000345080 CERKQ8TCT0 537 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 TRPC5Q9UL62 973 aaPredicted RBP8.93□□□□□ -0.98
LIN28B-201ENST00000345080 CCDC43Q96MW1 224 aaKnown RBP8.93□□□□□ -0.98
LIN28B-201ENST00000345080 CRACR2AQ9BSW2 395 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 NUP62CLQ9H1M0 184 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 TNMDQ9H2S6 317 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 ZNF644Q9H582 1327 aaPredicted RBP8.93□□□□□ -0.98
LIN28B-201ENST00000345080 CCDC175P0C221 793 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 SPATS2Q86XZ4 545 aaKnown RBP8.93□□□□□ -0.98
LIN28B-201ENST00000345080 PANK1Q8TE04 598 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 ZBTB9Q96C00 473 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.93□□□□□ -0.98
LIN28B-201ENST00000345080 CDK13Q14004 1512 aaKnown RBP8.93□□□□□ -0.98
LIN28B-201ENST00000345080 BCL2L13Q9BXK5 485 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 FAM114A2Q9NRY5 505 aa8.93□□□□□ -0.98
LIN28B-201ENST00000345080 PIK3C2GO75747 1445 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 DBN1Q16643 649 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 FBXO41Q8TF61 875 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 RPGRQ92834 1020 aaKnown RBP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 NCAPGQ9BPX3 1015 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 SCAF11Q99590 1463 aaKnown RBP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 SATB1Q01826 763 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 ALDH1L2Q3SY69 923 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 OLFM4Q6UX06 510 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 TCP11L2Q8N4U5 519 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 DDX54Q8TDD1 881 aaKnown RBP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 SCLT1Q96NL6 688 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 DNAI2Q9GZS0 605 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 TMOD3Q9NYL9 352 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 PPP2R5AQ15172 486 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 CTCFLQ8NI51 663 aaPredicted RBP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 BCL2L12Q9HB09 334 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 SPATS2LQ9NUQ6 558 aaKnown RBP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 PRDM4Q9UKN5 801 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 VPS37CA5D8V6 355 aaPredicted RBP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 CTAGE5O15320 804 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 RAD21O60216 631 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 U2AF2P26368 475 aaKnown RBP eCLIP8.92□□□□□ -0.987e-7■■■■□ 20.9
LIN28B-201ENST00000345080 RBM5P52756 815 aaKnown RBP eCLIP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 CLNS1AP54105 237 aaKnown RBP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 KIF22Q14807 665 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms