RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 MYBBP1AQ9BQG0 1328 aaKnown RBP26.57■■□□□ 1.84
CEACAM3-201ENST00000344550 PELP1Q8IZL8 1130 aaKnown RBP26.56■■□□□ 1.84
CEACAM3-201ENST00000344550 ZBTB1Q9Y2K1 713 aa26.56■■□□□ 1.84
CEACAM3-201ENST00000344550 YBX3P16989 372 aaKnown RBP eCLIP26.55■■□□□ 1.84
CEACAM3-201ENST00000344550 KIF13BQ9NQT8 1826 aa26.55■■□□□ 1.84
CEACAM3-201ENST00000344550 COL15A1P39059 1388 aa26.55■■□□□ 1.84
CEACAM3-201ENST00000344550 C10orf71Q711Q0 1435 aa26.55■■□□□ 1.84
CEACAM3-201ENST00000344550 EIF5P55010 431 aaKnown RBP26.54■■□□□ 1.84
CEACAM3-201ENST00000344550 FKBP8Q14318 412 aa26.54■■□□□ 1.84
CEACAM3-201ENST00000344550 TAF7Q15545 349 aaPredicted RBP26.54■■□□□ 1.84
CEACAM3-201ENST00000344550 MCM10Q7L590 875 aa26.54■■□□□ 1.84
CEACAM3-201ENST00000344550 SRP68Q9UHB9 627 aaKnown RBP26.54■■□□□ 1.84
CEACAM3-201ENST00000344550 GOLGB1Q14789 3259 aaKnown RBP26.53■■□□□ 1.84
CEACAM3-201ENST00000344550 TM4SF1P30408 202 aa26.53■■□□□ 1.84
CEACAM3-201ENST00000344550 NFE2L2Q16236 605 aa26.53■■□□□ 1.84
CEACAM3-201ENST00000344550 PNISRQ8TF01 805 aaKnown RBP26.53■■□□□ 1.84
CEACAM3-201ENST00000344550 MAPK8IP3Q9UPT6 1336 aa26.53■■□□□ 1.84
CEACAM3-201ENST00000344550 IL6STP40189 918 aaPredicted RBP26.52■■□□□ 1.84
CEACAM3-201ENST00000344550 SNRPA1P09661 255 aaKnown RBP26.51■■□□□ 1.83
CEACAM3-201ENST00000344550 CANXP27824 592 aaKnown RBP26.5■■□□□ 1.83
CEACAM3-201ENST00000344550 USPL1Q5W0Q7 1092 aa26.5■■□□□ 1.83
CEACAM3-201ENST00000344550 NPM2Q86SE8 214 aaKnown RBP26.49■■□□□ 1.83
CEACAM3-201ENST00000344550 PXDNLA1KZ92 1463 aa26.48■■□□□ 1.83
CEACAM3-201ENST00000344550 POLRMTO00411 1230 aaKnown RBP26.47■■□□□ 1.83
CEACAM3-201ENST00000344550 DDR1Q08345 913 aa26.47■■□□□ 1.83
CEACAM3-201ENST00000344550 DCTN1Q14203 1278 aa26.47■■□□□ 1.83
CEACAM3-201ENST00000344550 ZNF784Q8NCA9 323 aaPredicted RBP26.47■■□□□ 1.83
CEACAM3-201ENST00000344550 KCNQ3O43525 872 aa26.46■■□□□ 1.83
CEACAM3-201ENST00000344550 RGL2O15211 777 aa26.45■■□□□ 1.82
CEACAM3-201ENST00000344550 PRKRIP1Q9H875 184 aaPredicted RBP26.44■■□□□ 1.82
CEACAM3-201ENST00000344550 BCL2L12Q9HB09 334 aa26.44■■□□□ 1.82
CEACAM3-201ENST00000344550 LMOD3Q0VAK6 560 aa26.43■■□□□ 1.82
CEACAM3-201ENST00000344550 NFIXQ14938 502 aa26.43■■□□□ 1.82
CEACAM3-201ENST00000344550 BABAM1Q9NWV8 329 aa26.43■■□□□ 1.82
CEACAM3-201ENST00000344550 A1BGP04217 495 aa26.42■■□□□ 1.82
CEACAM3-201ENST00000344550 USP16Q9Y5T5 823 aa26.42■■□□□ 1.82
CEACAM3-201ENST00000344550 DLG5Q8TDM6 1919 aa26.41■■□□□ 1.82
CEACAM3-201ENST00000344550 A0A0G2JLW4 131 aa26.41■■□□□ 1.82
CEACAM3-201ENST00000344550 KIAA1551Q9HCM1 1747 aa26.41■■□□□ 1.82
CEACAM3-201ENST00000344550 DPEP1P16444 411 aa26.4■■□□□ 1.82
CEACAM3-201ENST00000344550 WDR43Q15061 677 aaKnown RBP eCLIP26.39■■□□□ 1.82
CEACAM3-201ENST00000344550 CLEC4GQ6UXB4 293 aa26.39■■□□□ 1.82
CEACAM3-201ENST00000344550 PIM2Q9P1W9 311 aa26.39■■□□□ 1.82
CEACAM3-201ENST00000344550 SERPINB2P05120 415 aa26.38■■□□□ 1.81
CEACAM3-201ENST00000344550 RIPK4P57078 832 aa26.38■■□□□ 1.81
CEACAM3-201ENST00000344550 PDZRN3Q9UPQ7 1066 aa26.38■■□□□ 1.81
CEACAM3-201ENST00000344550 NRXN2Q9P2S2 1712 aa26.38■■□□□ 1.81
CEACAM3-201ENST00000344550 KCNA3P22001 575 aa26.37■■□□□ 1.81
CEACAM3-201ENST00000344550 TMPOP42166 694 aaKnown RBP26.37■■□□□ 1.81
CEACAM3-201ENST00000344550 RUNDC1Q96C34 613 aa26.36■■□□□ 1.81
CEACAM3-201ENST00000344550 TBC1D2BQ9UPU7 963 aa26.36■■□□□ 1.81
CEACAM3-201ENST00000344550 GIGYF1O75420 1035 aaPredicted RBP26.35■■□□□ 1.81
CEACAM3-201ENST00000344550 CAMTA2O94983 1202 aa26.35■■□□□ 1.81
CEACAM3-201ENST00000344550 EIF4A1P60842 406 aaKnown RBP26.35■■□□□ 1.81
CEACAM3-201ENST00000344550 DZIP3Q86Y13 1208 aaKnown RBP26.35■■□□□ 1.81
CEACAM3-201ENST00000344550 BCS1LQ9Y276 419 aa26.35■■□□□ 1.81
CEACAM3-201ENST00000344550 ZNF652Q9Y2D9 606 aa26.35■■□□□ 1.81
CEACAM3-201ENST00000344550 ZNF330Q9Y3S2 320 aaPredicted RBP26.35■■□□□ 1.81
CEACAM3-201ENST00000344550 SCN7AQ01118 1682 aa26.34■■□□□ 1.81
CEACAM3-201ENST00000344550 CARMIL3Q8ND23 1372 aa26.34■■□□□ 1.81
CEACAM3-201ENST00000344550 KDM3BQ7LBC6 1761 aa26.34■■□□□ 1.81
CEACAM3-201ENST00000344550 N4BP2Q86UW6 1770 aaPredicted RBP26.34■■□□□ 1.81
CEACAM3-201ENST00000344550 MIS18AQ9NYP9 233 aa26.34■■□□□ 1.81
CEACAM3-201ENST00000344550 DALRD3Q5D0E6 543 aaKnown RBP26.33■■□□□ 1.81
CEACAM3-201ENST00000344550 SETDB2Q96T68 719 aa26.33■■□□□ 1.81
CEACAM3-201ENST00000344550 BRCA1P38398 1863 aaKnown RBP26.33■■□□□ 1.81
CEACAM3-201ENST00000344550 PRAMEF22A3QJZ6 481 aa26.32■■□□□ 1.8
CEACAM3-201ENST00000344550 TBC1D9BQ66K14 1250 aa26.32■■□□□ 1.8
CEACAM3-201ENST00000344550 NBPF26B4DH59 902 aa26.31■■□□□ 1.8
CEACAM3-201ENST00000344550 NBPF10Q6P3W6 841 aaKnown RBP26.31■■□□□ 1.8
CEACAM3-201ENST00000344550 NBPF15Q8N660 670 aa26.31■■□□□ 1.8
CEACAM3-201ENST00000344550 THUMPD2Q9BTF0 503 aaKnown RBP26.31■■□□□ 1.8
CEACAM3-201ENST00000344550 ERBB4Q15303 1308 aa26.31■■□□□ 1.8
CEACAM3-201ENST00000344550 ADCY9O60503 1353 aa26.31■■□□□ 1.8
CEACAM3-201ENST00000344550 AFDNP55196 1824 aaKnown RBP26.3■■□□□ 1.8
CEACAM3-201ENST00000344550 BRIP1Q9BX63 1249 aa26.3■■□□□ 1.8
CEACAM3-201ENST00000344550 ADAMTS8Q9UP79 889 aa26.3■■□□□ 1.8
CEACAM3-201ENST00000344550 TSPYL4Q9UJ04 414 aa26.29■■□□□ 1.8
CEACAM3-201ENST00000344550 LAMB4A4D0S4 1761 aa26.28■■□□□ 1.8
CEACAM3-201ENST00000344550 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
CEACAM3-201ENST00000344550 PDE6BP35913 854 aa26.28■■□□□ 1.8
CEACAM3-201ENST00000344550 BICDL1Q6ZP65 573 aa26.28■■□□□ 1.8
CEACAM3-201ENST00000344550 WWC3Q9ULE0 1092 aa26.28■■□□□ 1.8
CEACAM3-201ENST00000344550 H0YIN7 160 aa26.27■■□□□ 1.8
CEACAM3-201ENST00000344550 BCORQ6W2J9 1755 aa26.26■■□□□ 1.79
CEACAM3-201ENST00000344550 ERVV-1B6SEH8 477 aa26.26■■□□□ 1.79
CEACAM3-201ENST00000344550 CHRNA5P30532 468 aa26.26■■□□□ 1.79
CEACAM3-201ENST00000344550 ARHGAP27Q6ZUM4 889 aa26.26■■□□□ 1.79
CEACAM3-201ENST00000344550 PRR5LQ6MZQ0 368 aa26.25■■□□□ 1.79
CEACAM3-201ENST00000344550 CNBD1Q8NA66 436 aa26.25■■□□□ 1.79
CEACAM3-201ENST00000344550 ATP10DQ9P241 1426 aa26.24■■□□□ 1.79
CEACAM3-201ENST00000344550 CCDC146Q8IYE0 955 aa26.24■■□□□ 1.79
CEACAM3-201ENST00000344550 ZNF316A6NFI3 1004 aaPredicted RBP26.23■■□□□ 1.79
CEACAM3-201ENST00000344550 CHL1O00533 1208 aa26.23■■□□□ 1.79
CEACAM3-201ENST00000344550 PIP4K2AP48426 406 aaPredicted RBP26.23■■□□□ 1.79
CEACAM3-201ENST00000344550 ST5P78524 1137 aa26.23■■□□□ 1.79
CEACAM3-201ENST00000344550 C2CD5Q86YS7 1000 aa26.23■■□□□ 1.79
CEACAM3-201ENST00000344550 TTLL6Q8N841 843 aa26.23■■□□□ 1.79
CEACAM3-201ENST00000344550 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
CEACAM3-201ENST00000344550 DLEC1Q9Y238 1755 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms