RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-201ENST00000338508 MYZAPP0CAP1 466 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHANK2-201ENST00000338508 PANK2Q9BZ23 570 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 KIF5CO60282 957 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 RAB11FIP4Q86YS3 637 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
SHANK2-201ENST00000338508 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 CKAP2LQ8IYA6 745 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 GPTP24298 496 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 PPP1R14CQ8TAE6 165 aa13.65□□□□□ -0.22
SHANK2-201ENST00000338508 MAP3K11Q16584 847 aa13.65□□□□□ -0.23
SHANK2-201ENST00000338508 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 CBX1P83916 185 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 IFIT1P09914 478 aaKnown RBP13.64□□□□□ -0.23
SHANK2-201ENST00000338508 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 PRPF40BQ6NWY9 871 aaKnown RBP13.64□□□□□ -0.23
SHANK2-201ENST00000338508 TSNARE1Q96NA8 513 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 ATP2C2O75185 946 aa13.64□□□□□ -0.23
SHANK2-201ENST00000338508 MTIF2P46199 727 aaKnown RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 FAM107BQ9H098 131 aa13.63□□□□□ -0.23
SHANK2-201ENST00000338508 BIN1O00499 593 aa13.63□□□□□ -0.23
SHANK2-201ENST00000338508 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
SHANK2-201ENST00000338508 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 IPO4Q8TEX9 1081 aaKnown RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 MYO1BO43795 1136 aa13.63□□□□□ -0.23
SHANK2-201ENST00000338508 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
SHANK2-201ENST00000338508 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-201ENST00000338508 IDEP14735 1019 aa13.62□□□□□ -0.23
SHANK2-201ENST00000338508 SSRP1Q08945 709 aaKnown RBP13.62□□□□□ -0.23
SHANK2-201ENST00000338508 RRBP1Q9P2E9 1410 aaKnown RBP13.62□□□□□ -0.23
SHANK2-201ENST00000338508 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-201ENST00000338508 PTPN14Q15678 1187 aa13.62□□□□□ -0.23
SHANK2-201ENST00000338508 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
SHANK2-201ENST00000338508 ARHGAP5Q13017 1502 aa13.62□□□□□ -0.23
SHANK2-201ENST00000338508 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 IFIT3O14879 490 aaKnown RBP13.61□□□□□ -0.23
SHANK2-201ENST00000338508 ZWINTO95229 277 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 KRT32Q14532 448 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 FAM212AQ96EL1 285 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 GPATCH11Q8N954 259 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 TRMT112Q9UI30 125 aaKnown RBP13.61□□□□□ -0.23
SHANK2-201ENST00000338508 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
SHANK2-201ENST00000338508 MCM10Q7L590 875 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 MAATS1Q7Z4T9 603 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 CNNM3Q8NE01 707 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.235e-7■■■■■ 27.6
SHANK2-201ENST00000338508 CCDC194A0A1B0GVG4 234 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 BAG4O95429 457 aaKnown RBP13.61□□□□□ -0.23
SHANK2-201ENST00000338508 GJC1P36383 396 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 EHMT1Q9H9B1 1298 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 ZNF213O14771 459 aa13.61□□□□□ -0.23
SHANK2-201ENST00000338508 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■□□□ 14.2
SHANK2-201ENST00000338508 ANKRD18BA2A2Z9 1011 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 F8W031 263 aaPredicted RBP13.6□□□□□ -0.23
SHANK2-201ENST00000338508 PAFAH1B1P43034 410 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 PLS1Q14651 629 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 PDCL2Q8N4E4 241 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 RAB3IL1Q8TBN0 382 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 CCDC175P0C221 793 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 BMS1Q14692 1282 aaKnown RBP13.6□□□□□ -0.23
SHANK2-201ENST00000338508 RAB34Q9BZG1 259 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 PSMC4P43686 418 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 AKAP2Q9Y2D5 859 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
SHANK2-201ENST00000338508 MAP9Q49MG5 647 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
SHANK2-201ENST00000338508 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 AFAP1Q8N556 730 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 ZSWIM4Q9H7M6 989 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 IKBKGQ9Y6K9 419 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 SH3BP5O60239 455 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 USO1O60763 962 aaKnown RBP13.59□□□□□ -0.23
SHANK2-201ENST00000338508 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
SHANK2-201ENST00000338508 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
SHANK2-201ENST00000338508 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 MAP3K12Q12852 859 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-201ENST00000338508 MXRA7P84157 204 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 TAOK3Q9H2K8 898 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 TMEM110-MUSTN1A8MSY1 372 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 SLC5A1P13866 664 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 ATF7IPQ6VMQ6 1270 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 CATIPQ7Z7H3 387 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 TIGD1Q96MW7 591 aa13.59□□□□□ -0.23
SHANK2-201ENST00000338508 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.23
SHANK2-201ENST00000338508 GOLGA8BA8MQT2 603 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 CETN1Q12798 172 aa13.58□□□□□ -0.24
SHANK2-201ENST00000338508 ATP2B3Q16720 1220 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms