RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 BRINP3Q76B58 766 aa14.29□□□□□ -0.12
RBM39-202ENST00000338163 TTC21BQ7Z4L5 1316 aa14.29□□□□□ -0.12
RBM39-202ENST00000338163 ZNF710Q8N1W2 664 aa14.29□□□□□ -0.12
RBM39-202ENST00000338163 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
RBM39-202ENST00000338163 KIF3AQ9Y496 699 aa14.29□□□□□ -0.12
RBM39-202ENST00000338163 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
RBM39-202ENST00000338163 PRIMPOLQ96LW4 560 aa14.29□□□□□ -0.12
RBM39-202ENST00000338163 USP6P35125 1406 aa14.29□□□□□ -0.12
RBM39-202ENST00000338163 HMMRO75330 724 aa14.28□□□□□ -0.12
RBM39-202ENST00000338163 MCM2P49736 904 aa14.28□□□□□ -0.12
RBM39-202ENST00000338163 EDC4Q6P2E9 1401 aaKnown RBP14.28□□□□□ -0.12
RBM39-202ENST00000338163 RTL1A6NKG5 1358 aa14.28□□□□□ -0.12
RBM39-202ENST00000338163 SOX12O15370 315 aa14.28□□□□□ -0.12
RBM39-202ENST00000338163 DTNBO60941 627 aa14.28□□□□□ -0.12
RBM39-202ENST00000338163 ZSCAN20P17040 1043 aaPredicted RBP14.28□□□□□ -0.12
RBM39-202ENST00000338163 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
RBM39-202ENST00000338163 DMTNQ08495 405 aa14.28□□□□□ -0.12
RBM39-202ENST00000338163 KRT28Q7Z3Y7 464 aa14.28□□□□□ -0.12
RBM39-202ENST00000338163 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
RBM39-202ENST00000338163 F6X3S4 739 aa14.27□□□□□ -0.12
RBM39-202ENST00000338163 ESYT1Q9BSJ8 1104 aa14.27□□□□□ -0.12
RBM39-202ENST00000338163 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
RBM39-202ENST00000338163 MCM10Q7L590 875 aa14.27□□□□□ -0.13
RBM39-202ENST00000338163 ABTB2Q8N961 1025 aa14.27□□□□□ -0.13
RBM39-202ENST00000338163 FAM184AQ8NB25 1140 aa14.27□□□□□ -0.13
RBM39-202ENST00000338163 SPC24Q8NBT2 197 aa14.27□□□□□ -0.13
RBM39-202ENST00000338163 CNPY2Q9Y2B0 182 aa14.27□□□□□ -0.13
RBM39-202ENST00000338163 TOPAZ1Q8N9V7 1692 aa14.26□□□□□ -0.13
RBM39-202ENST00000338163 FIBPO43427 364 aa14.26□□□□□ -0.13
RBM39-202ENST00000338163 IL13P35225 146 aa14.26□□□□□ -0.13
RBM39-202ENST00000338163 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
RBM39-202ENST00000338163 UBAP1LF5GYI3 381 aa14.26□□□□□ -0.13
RBM39-202ENST00000338163 IGSF3O75054 1194 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 NLRP6P59044 892 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 CHAF1AQ13111 956 aaPredicted RBP14.25□□□□□ -0.13
RBM39-202ENST00000338163 CUL4AQ13619 759 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 ATP2B3Q16720 1220 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 COG3Q96JB2 828 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 MIS18AQ9NYP9 233 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 CCDC183Q5T5S1 534 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 SRCIN1Q9C0H9 1055 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 BCL2L12Q9HB09 334 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 NPHP3Q7Z494 1330 aa14.25□□□□□ -0.13
RBM39-202ENST00000338163 ITSN1Q15811 1721 aa14.24□□□□□ -0.13
RBM39-202ENST00000338163 TOM1O60784 492 aa14.24□□□□□ -0.13
RBM39-202ENST00000338163 GIMAP6Q6P9H5 292 aa14.24□□□□□ -0.13
RBM39-202ENST00000338163 AEBP1Q8IUX7 1158 aa14.24□□□□□ -0.13
RBM39-202ENST00000338163 PDCL2Q8N4E4 241 aa14.24□□□□□ -0.13
RBM39-202ENST00000338163 INTS4Q96HW7 963 aaKnown RBP14.24□□□□□ -0.13
RBM39-202ENST00000338163 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
RBM39-202ENST00000338163 MX1P20591 662 aa14.23□□□□□ -0.13
RBM39-202ENST00000338163 KIF24Q5T7B8 1368 aa14.23□□□□□ -0.13
RBM39-202ENST00000338163 FKBP5Q13451 457 aaPredicted RBP14.22□□□□□ -0.13
RBM39-202ENST00000338163 TTC21AQ8NDW8 1320 aa14.22□□□□□ -0.13
RBM39-202ENST00000338163 MAP4K4O95819 1239 aaPredicted RBP14.22□□□□□ -0.13
RBM39-202ENST00000338163 UVSSAQ2YD98 709 aa14.22□□□□□ -0.13
RBM39-202ENST00000338163 LRRCC1Q9C099 1032 aa14.22□□□□□ -0.13
RBM39-202ENST00000338163 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
RBM39-202ENST00000338163 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
RBM39-202ENST00000338163 CHMLP26374 656 aa14.22□□□□□ -0.13
RBM39-202ENST00000338163 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
RBM39-202ENST00000338163 SULT6B1Q6IMI4 303 aa14.22□□□□□ -0.13
RBM39-202ENST00000338163 SSH2Q76I76 1423 aa14.22□□□□□ -0.13
RBM39-202ENST00000338163 KDM4AO75164 1064 aa14.21□□□□□ -0.13
RBM39-202ENST00000338163 U2AF2P26368 475 aaKnown RBP eCLIP14.21□□□□□ -0.132e-8■■□□□ 13.9
RBM39-202ENST00000338163 UTP14CQ5TAP6 766 aaKnown RBP14.21□□□□□ -0.13
RBM39-202ENST00000338163 RIOK3O14730 519 aaKnown RBP14.21□□□□□ -0.14
RBM39-202ENST00000338163 G2E3Q7L622 706 aa14.21□□□□□ -0.14
RBM39-202ENST00000338163 UNC5CLQ8IV45 518 aa14.21□□□□□ -0.14
RBM39-202ENST00000338163 PYCARDQ9ULZ3 195 aa14.21□□□□□ -0.14
RBM39-202ENST00000338163 IL1RAPL2Q9NP60 686 aa14.2□□□□□ -0.14
RBM39-202ENST00000338163 RGS12O14924 1447 aa14.2□□□□□ -0.14
RBM39-202ENST00000338163 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
RBM39-202ENST00000338163 NECTIN2Q92692 538 aa14.2□□□□□ -0.14
RBM39-202ENST00000338163 OSBPL3Q9H4L5 887 aa14.2□□□□□ -0.14
RBM39-202ENST00000338163 GNAI2P04899 355 aa14.19□□□□□ -0.14
RBM39-202ENST00000338163 ANAPC15P60006 121 aa14.19□□□□□ -0.14
RBM39-202ENST00000338163 IL25Q9H293 177 aa14.19□□□□□ -0.14
RBM39-202ENST00000338163 DIAPH3Q9NSV4 1193 aa14.19□□□□□ -0.14
RBM39-202ENST00000338163 PTPRCP08575 1304 aa14.19□□□□□ -0.14
RBM39-202ENST00000338163 AKAP12Q02952 1782 aa14.19□□□□□ -0.14
RBM39-202ENST00000338163 UBE2HP62256 183 aa14.19□□□□□ -0.14
RBM39-202ENST00000338163 MON2Q7Z3U7 1717 aa14.19□□□□□ -0.14
RBM39-202ENST00000338163 ZSCAN22P10073 491 aaPredicted RBP14.18□□□□□ -0.14
RBM39-202ENST00000338163 SPTLC3Q9NUV7 552 aa14.18□□□□□ -0.14
RBM39-202ENST00000338163 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
RBM39-202ENST00000338163 STX6O43752 255 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 SYT1P21579 422 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 SMC3Q9UQE7 1217 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 AP5Z1O43299 807 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 LETM1O95202 739 aaPredicted RBP14.17□□□□□ -0.14
RBM39-202ENST00000338163 NUTM1Q86Y26 1132 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 KIAA1524Q8TCG1 905 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 CABLES1Q8TDN4 633 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 KCNF1Q9H3M0 494 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 CHL1O00533 1208 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 CPA1P15085 419 aa14.17□□□□□ -0.14
RBM39-202ENST00000338163 GTPBP4Q9BZE4 634 aaKnown RBP14.17□□□□□ -0.14
RBM39-202ENST00000338163 ANKRD26Q9UPS8 1709 aa14.16□□□□□ -0.14
RBM39-202ENST00000338163 VPS37CA5D8V6 355 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms