RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SIK1P57059 783 aa27.6■■■□□ 2.01
TPM1-204ENST00000334895 DNAJC10Q8IXB1 793 aa27.6■■■□□ 2.01
TPM1-204ENST00000334895 RRP1P56182 461 aaKnown RBP27.59■■■□□ 2.01
TPM1-204ENST00000334895 BAG6P46379 1132 aa27.59■■■□□ 2.01
TPM1-204ENST00000334895 CHPF2Q9P2E5 772 aa27.59■■■□□ 2.01
TPM1-204ENST00000334895 RREB1Q92766 1687 aa27.58■■■□□ 2.01
TPM1-204ENST00000334895 CACNA1FO60840 1977 aa27.58■■■□□ 2.01
TPM1-204ENST00000334895 PLIN1O60240 522 aa27.58■■■□□ 2.01
TPM1-204ENST00000334895 EN1Q05925 392 aaPredicted RBP27.58■■■□□ 2.01
TPM1-204ENST00000334895 SLC4A2P04920 1241 aa27.56■■■□□ 2
TPM1-204ENST00000334895 ITPK1Q13572 414 aa27.56■■■□□ 2
TPM1-204ENST00000334895 PDIA6Q15084 440 aa27.56■■■□□ 2
TPM1-204ENST00000334895 PROSER3Q2NL68 480 aa27.56■■■□□ 2
TPM1-204ENST00000334895 STK31Q9BXU1 1019 aa27.56■■■□□ 2
TPM1-204ENST00000334895 COL5A3P25940 1745 aaPredicted RBP27.55■■■□□ 2
TPM1-204ENST00000334895 ANXA1P04083 346 aa27.55■■■□□ 2
TPM1-204ENST00000334895 ATP6V1AP38606 617 aa27.55■■■□□ 2
TPM1-204ENST00000334895 G2E3Q7L622 706 aa27.55■■■□□ 2
TPM1-204ENST00000334895 TEX13AQ9BXU3 409 aaPredicted RBP27.55■■■□□ 2
TPM1-204ENST00000334895 CHMP4AQ9BY43 222 aa27.55■■■□□ 2
TPM1-204ENST00000334895 NOB1Q9ULX3 412 aaKnown RBP27.55■■■□□ 2
TPM1-204ENST00000334895 FRAT1Q92837 279 aaPredicted RBP27.54■■■□□ 2
TPM1-204ENST00000334895 NUP188Q5SRE5 1749 aa27.54■■■□□ 2
TPM1-204ENST00000334895 KIF16BQ96L93 1317 aa27.54■■■□□ 2
TPM1-204ENST00000334895 CYP19A1P11511 503 aaPredicted RBP27.53■■■□□ 2
TPM1-204ENST00000334895 DBF4Q9UBU7 674 aaPredicted RBP27.53■■■□□ 2
TPM1-204ENST00000334895 NBPF26B4DH59 902 aa27.52■■■□□ 2
TPM1-204ENST00000334895 PIP4K2AP48426 406 aaPredicted RBP27.52■■■□□ 2
TPM1-204ENST00000334895 KCNQ4P56696 695 aa27.52■■■□□ 2
TPM1-204ENST00000334895 EZH2Q15910 746 aaKnown RBP27.52■■■□□ 2
TPM1-204ENST00000334895 NBPF14Q5TI25 921 aa27.52■■■□□ 2
TPM1-204ENST00000334895 NBPF10Q6P3W6 841 aaKnown RBP27.52■■■□□ 2
TPM1-204ENST00000334895 NBPF15Q8N660 670 aa27.52■■■□□ 2
TPM1-204ENST00000334895 DDX21Q9NR30 783 aaKnown RBP eCLIP27.52■■■□□ 2
TPM1-204ENST00000334895 A1BGP04217 495 aa27.52■■■□□ 2
TPM1-204ENST00000334895 LRP10Q7Z4F1 713 aa27.52■■■□□ 2
TPM1-204ENST00000334895 TNNQ9UQP3 1299 aa27.52■■■□□ 2
TPM1-204ENST00000334895 CAMKK2Q96RR4 588 aa27.51■■□□□ 1.99
TPM1-204ENST00000334895 ERBB4Q15303 1308 aa27.5■■□□□ 1.99
TPM1-204ENST00000334895 STARD3NLO95772 234 aa27.5■■□□□ 1.99
TPM1-204ENST00000334895 PHAXQ9H814 394 aaKnown RBP27.5■■□□□ 1.99
TPM1-204ENST00000334895 TAF1LQ8IZX4 1826 aa27.5■■□□□ 1.99
TPM1-204ENST00000334895 PLSCR1O15162 318 aa27.49■■□□□ 1.99
TPM1-204ENST00000334895 MYH14Q7Z406 1995 aaKnown RBP27.49■■□□□ 1.99
TPM1-204ENST00000334895 C20orf194Q5TEA3 1177 aa27.49■■□□□ 1.99
TPM1-204ENST00000334895 ZKSCAN2Q63HK3 967 aa27.49■■□□□ 1.99
TPM1-204ENST00000334895 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.49■■□□□ 1.99
TPM1-204ENST00000334895 LINC00116Q8NCU8 138 aa27.49■■□□□ 1.99
TPM1-204ENST00000334895 CCNL1Q9UK58 526 aaPredicted RBP27.49■■□□□ 1.99
TPM1-204ENST00000334895 TRIM27P14373 513 aa27.48■■□□□ 1.99
TPM1-204ENST00000334895 FLIIQ13045 1269 aa27.48■■□□□ 1.99
TPM1-204ENST00000334895 MYL6BP14649 208 aa27.47■■□□□ 1.99
TPM1-204ENST00000334895 CANXP27824 592 aaKnown RBP27.47■■□□□ 1.99
TPM1-204ENST00000334895 ATF7IPQ6VMQ6 1270 aa27.47■■□□□ 1.99
TPM1-204ENST00000334895 HYPKQ9NX55 129 aa27.47■■□□□ 1.99
TPM1-204ENST00000334895 ARHGAP45Q92619 1136 aa27.46■■□□□ 1.99
TPM1-204ENST00000334895 LRRC4BQ9NT99 713 aa27.46■■□□□ 1.99
TPM1-204ENST00000334895 IRX6P78412 446 aaPredicted RBP27.45■■□□□ 1.99
TPM1-204ENST00000334895 INTS5Q6P9B9 1019 aaKnown RBP27.45■■□□□ 1.99
TPM1-204ENST00000334895 PROM2Q8N271 834 aa27.45■■□□□ 1.99
TPM1-204ENST00000334895 ZBTB1Q9Y2K1 713 aa27.45■■□□□ 1.99
TPM1-204ENST00000334895 PTPRCP08575 1304 aa27.45■■□□□ 1.99
TPM1-204ENST00000334895 IPO8O15397 1037 aaKnown RBP27.45■■□□□ 1.98
TPM1-204ENST00000334895 CRKLP46109 303 aaKnown RBP27.45■■□□□ 1.98
TPM1-204ENST00000334895 RLBP1P12271 317 aa27.44■■□□□ 1.98
TPM1-204ENST00000334895 CLUAP1Q96AJ1 413 aa27.43■■□□□ 1.98
TPM1-204ENST00000334895 CCDC87Q9NVE4 849 aa27.43■■□□□ 1.98
TPM1-204ENST00000334895 TXNRD1Q16881 649 aa27.42■■□□□ 1.98
TPM1-204ENST00000334895 PANK1Q8TE04 598 aa27.41■■□□□ 1.98
TPM1-204ENST00000334895 XAGE3Q8WTP9 111 aa27.41■■□□□ 1.98
TPM1-204ENST00000334895 C4BP0C0L5 1744 aa27.41■■□□□ 1.98
TPM1-204ENST00000334895 CNTNAP4Q9C0A0 1308 aa27.41■■□□□ 1.98
TPM1-204ENST00000334895 FKBP5Q13451 457 aaPredicted RBP27.41■■□□□ 1.98
TPM1-204ENST00000334895 PDE3AQ14432 1141 aa27.41■■□□□ 1.98
TPM1-204ENST00000334895 SLC27A3Q5K4L6 730 aa27.41■■□□□ 1.98
TPM1-204ENST00000334895 API5Q9BZZ5 524 aaKnown RBP27.41■■□□□ 1.98
TPM1-204ENST00000334895 ABCC4O15439 1325 aa27.4■■□□□ 1.98
TPM1-204ENST00000334895 COPS6Q7L5N1 327 aa27.4■■□□□ 1.98
TPM1-204ENST00000334895 ADCY9O60503 1353 aa27.39■■□□□ 1.98
TPM1-204ENST00000334895 AIMP1Q12904 312 aaKnown RBP27.39■■□□□ 1.98
TPM1-204ENST00000334895 DZIP1LQ8IYY4 767 aaKnown RBP27.39■■□□□ 1.98
TPM1-204ENST00000334895 F6X3S4 739 aa27.38■■□□□ 1.97
TPM1-204ENST00000334895 IL6STP40189 918 aaPredicted RBP27.37■■□□□ 1.97
TPM1-204ENST00000334895 RC3H1Q5TC82 1133 aaKnown RBP27.37■■□□□ 1.97
TPM1-204ENST00000334895 TTLL7Q6ZT98 887 aa27.37■■□□□ 1.97
TPM1-204ENST00000334895 EIF5P55010 431 aaKnown RBP27.36■■□□□ 1.97
TPM1-204ENST00000334895 FTSJ3Q8IY81 847 aaKnown RBP27.36■■□□□ 1.97
TPM1-204ENST00000334895 PI4KAP2A4QPH2 592 aa27.35■■□□□ 1.97
TPM1-204ENST00000334895 PI4KAP1Q8N8J0 262 aa27.35■■□□□ 1.97
TPM1-204ENST00000334895 ZNF330Q9Y3S2 320 aaPredicted RBP27.35■■□□□ 1.97
TPM1-204ENST00000334895 N4BP2Q86UW6 1770 aaPredicted RBP27.35■■□□□ 1.97
TPM1-204ENST00000334895 TMEM57Q8N5G2 664 aa27.34■■□□□ 1.97
TPM1-204ENST00000334895 CRBNQ96SW2 442 aa27.34■■□□□ 1.97
TPM1-204ENST00000334895 ARFGEF2Q9Y6D5 1785 aa27.34■■□□□ 1.97
TPM1-204ENST00000334895 NEFLP07196 543 aa27.34■■□□□ 1.97
TPM1-204ENST00000334895 MS4A1P11836 297 aa27.34■■□□□ 1.97
TPM1-204ENST00000334895 KSR2Q6VAB6 950 aa27.34■■□□□ 1.97
TPM1-204ENST00000334895 COG6Q9Y2V7 657 aa27.33■■□□□ 1.97
TPM1-204ENST00000334895 TUBGCP6Q96RT7 1819 aa27.33■■□□□ 1.96
TPM1-204ENST00000334895 FKBP8Q14318 412 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms