RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 PHKG2P15735 406 aa11.08□□□□□ -0.64
COPB2-201ENST00000333188 CWC27Q6UX04 472 aaKnown RBP11.08□□□□□ -0.64
COPB2-201ENST00000333188 G3BP1Q13283 466 aaKnown RBP eCLIP11.08□□□□□ -0.641e-7■■■□□ 15.3
COPB2-201ENST00000333188 SSH2Q76I76 1423 aa11.08□□□□□ -0.64
COPB2-201ENST00000333188 MX1P20591 662 aa11.08□□□□□ -0.64
COPB2-201ENST00000333188 AACSQ86V21 672 aa11.08□□□□□ -0.64
COPB2-201ENST00000333188 A0A087WZG4 1122 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 BOLA2Q9H3K6 86 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 SLC52A2Q9HAB3 445 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 KIF20BQ96Q89 1820 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 HTATSF1O43719 755 aaKnown RBP11.07□□□□□ -0.64
COPB2-201ENST00000333188 PDE1AP54750 535 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 NAP1L2Q9ULW6 460 aaPredicted RBP11.07□□□□□ -0.64
COPB2-201ENST00000333188 ANKARQ7Z5J8 1434 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 BMP2KLQ5H9B9 411 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 TTC22Q5TAA0 569 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
COPB2-201ENST00000333188 CLASRPQ8N2M8 674 aaKnown RBP11.06□□□□□ -0.64
COPB2-201ENST00000333188 FMNL2Q96PY5 1086 aa11.06□□□□□ -0.64
COPB2-201ENST00000333188 DNAJC2Q99543 621 aaKnown RBP11.06□□□□□ -0.64
COPB2-201ENST00000333188 SOS1Q07889 1333 aaPredicted RBP11.06□□□□□ -0.64
COPB2-201ENST00000333188 ATP8B2P98198 1209 aa11.06□□□□□ -0.64
COPB2-201ENST00000333188 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
COPB2-201ENST00000333188 TAF7LQ5H9L4 462 aa11.06□□□□□ -0.64
COPB2-201ENST00000333188 BICC1Q9H694 974 aaKnown RBP11.06□□□□□ -0.64
COPB2-201ENST00000333188 TMOD3Q9NYL9 352 aa11.06□□□□□ -0.64
COPB2-201ENST00000333188 SPATA31A3Q5VYP0 1347 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 NEK4P51957 841 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 TTLL7Q6ZT98 887 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 ASAP1Q9ULH1 1129 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
COPB2-201ENST00000333188 SNRPA1P09661 255 aaKnown RBP11.05□□□□□ -0.64
COPB2-201ENST00000333188 IL2RBP14784 551 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 KSR2Q6VAB6 950 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 SMIM5Q71RC9 77 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 RHPN1Q8TCX5 695 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 KDRP35968 1356 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
COPB2-201ENST00000333188 TBC1D2BQ9UPU7 963 aa11.05□□□□□ -0.64
COPB2-201ENST00000333188 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
COPB2-201ENST00000333188 NPHP1O15259 732 aa11.04□□□□□ -0.64
COPB2-201ENST00000333188 KIAA1211Q6ZU35 1233 aa11.04□□□□□ -0.64
COPB2-201ENST00000333188 SUCLG2Q96I99 432 aa11.04□□□□□ -0.64
COPB2-201ENST00000333188 C8orf37Q96NL8 207 aa11.04□□□□□ -0.64
COPB2-201ENST00000333188 USP32Q8NFA0 1604 aa11.04□□□□□ -0.64
COPB2-201ENST00000333188 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 BEND3Q5T5X7 828 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 GORABQ5T7V8 394 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 BICDL1Q6ZP65 573 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 DCAF5Q96JK2 942 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 DIAPH3Q9NSV4 1193 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 GRM8O00222 908 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 ZNF594Q96JF6 807 aaPredicted RBP11.03□□□□□ -0.64
COPB2-201ENST00000333188 HYPKQ9NX55 129 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 LMTK3Q96Q04 1460 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 CHAMP1Q96JM3 812 aa11.03□□□□□ -0.64
COPB2-201ENST00000333188 PXDNQ92626 1479 aa11.02□□□□□ -0.64
COPB2-201ENST00000333188 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.64
COPB2-201ENST00000333188 CPA1P15085 419 aa11.02□□□□□ -0.64
COPB2-201ENST00000333188 DNAJC10Q8IXB1 793 aa11.02□□□□□ -0.64
COPB2-201ENST00000333188 TCEANC2Q96MN5 208 aa11.02□□□□□ -0.64
COPB2-201ENST00000333188 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.64
COPB2-201ENST00000333188 UBAP1LF5GYI3 381 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 PRIM1P49642 420 aaKnown RBP11.02□□□□□ -0.65
COPB2-201ENST00000333188 BRPF1P55201 1214 aaPredicted RBP11.02□□□□□ -0.65
COPB2-201ENST00000333188 ADGRB2O60241 1585 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 EXOC5O00471 708 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 LMBR1LQ6UX01 489 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 SYNE4Q8N205 404 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 FAM89AQ96GI7 184 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 SNRKQ9NRH2 765 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 PEAK1Q9H792 1746 aa11.02□□□□□ -0.65
COPB2-201ENST00000333188 EPHA10Q5JZY3 1008 aa11.01□□□□□ -0.65
COPB2-201ENST00000333188 ERC2O15083 957 aa11□□□□□ -0.65
COPB2-201ENST00000333188 REC8O95072 547 aa11□□□□□ -0.65
COPB2-201ENST00000333188 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
COPB2-201ENST00000333188 FSD1Q9BTV5 496 aa11□□□□□ -0.65
COPB2-201ENST00000333188 KIF1BPQ96EK5 621 aa11□□□□□ -0.65
COPB2-201ENST00000333188 TLR7Q9NYK1 1049 aaKnown RBP11□□□□□ -0.65
COPB2-201ENST00000333188 SRCAPQ6ZRS2 3230 aa11□□□□□ -0.65
COPB2-201ENST00000333188 FGD1P98174 961 aa11□□□□□ -0.65
COPB2-201ENST00000333188 STK11IPQ8N1F8 1099 aa11□□□□□ -0.65
COPB2-201ENST00000333188 CHGBP05060 677 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 FOSBP53539 338 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 LINS1Q8NG48 757 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 KDM4AO75164 1064 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 TIMM10P62072 90 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 CHMP4AQ9BY43 222 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 IGKV5-2P06315 115 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 GTF2E1P29083 439 aaPredicted RBP10.99□□□□□ -0.65
COPB2-201ENST00000333188 FKBP4Q02790 459 aaKnown RBP eCLIP10.99□□□□□ -0.65
COPB2-201ENST00000333188 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
COPB2-201ENST00000333188 MCCP23508 829 aa10.98□□□□□ -0.65
COPB2-201ENST00000333188 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
COPB2-201ENST00000333188 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.98□□□□□ -0.65
COPB2-201ENST00000333188 DDX46Q7L014 1031 aaKnown RBP10.98□□□□□ -0.65
COPB2-201ENST00000333188 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms