RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 HSPA2P54652 639 aa20.72■□□□□ 0.91
PRKCD-201ENST00000330452 AXDND1Q5T1B0 1012 aaPredicted RBP20.72■□□□□ 0.91
PRKCD-201ENST00000330452 CEP85Q6P2H3 762 aa20.72■□□□□ 0.91
PRKCD-201ENST00000330452 ZNF622Q969S3 477 aaKnown RBP eCLIP20.72■□□□□ 0.91
PRKCD-201ENST00000330452 SETD1BQ9UPS6 1966 aaKnown RBP20.72■□□□□ 0.91
PRKCD-201ENST00000330452 ATP10DQ9P241 1426 aa20.72■□□□□ 0.91
PRKCD-201ENST00000330452 SMARCA5O60264 1052 aaPredicted RBP20.72■□□□□ 0.91
PRKCD-201ENST00000330452 FAM193AP78312 1265 aa20.72■□□□□ 0.91
PRKCD-201ENST00000330452 FEZ1Q99689 392 aa20.71■□□□□ 0.91
PRKCD-201ENST00000330452 MTHFSDQ2M296 383 aaKnown RBP20.71■□□□□ 0.91
PRKCD-201ENST00000330452 DDX17Q92841 729 aaKnown RBP20.71■□□□□ 0.91
PRKCD-201ENST00000330452 KIAA0232Q92628 1395 aa20.71■□□□□ 0.91
PRKCD-201ENST00000330452 ZNF445P59923 1031 aa20.71■□□□□ 0.91
PRKCD-201ENST00000330452 TTC22Q5TAA0 569 aa20.71■□□□□ 0.91
PRKCD-201ENST00000330452 CRB1P82279 1406 aa20.7■□□□□ 0.9
PRKCD-201ENST00000330452 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.9
PRKCD-201ENST00000330452 RBSNQ9H1K0 784 aa20.7■□□□□ 0.9
PRKCD-201ENST00000330452 OGFRQ9NZT2 677 aa20.7■□□□□ 0.9
PRKCD-201ENST00000330452 G2E3Q7L622 706 aa20.7■□□□□ 0.9
PRKCD-201ENST00000330452 RPAP2Q8IXW5 612 aaPredicted RBP20.7■□□□□ 0.9
PRKCD-201ENST00000330452 TSPYL1Q9H0U9 437 aa20.7■□□□□ 0.9
PRKCD-201ENST00000330452 RTL1A6NKG5 1358 aa20.69■□□□□ 0.9
PRKCD-201ENST00000330452 USP31Q70CQ4 1352 aa20.69■□□□□ 0.9
PRKCD-201ENST00000330452 K7ELQ4 463 aaPredicted RBP20.69■□□□□ 0.9
PRKCD-201ENST00000330452 RAB3GAP1Q15042 981 aa20.69■□□□□ 0.9
PRKCD-201ENST00000330452 PRR29P0C7W0 189 aa20.69■□□□□ 0.9
PRKCD-201ENST00000330452 F6X3S4 739 aa20.68■□□□□ 0.9
PRKCD-201ENST00000330452 KLHL40Q2TBA0 621 aa20.68■□□□□ 0.9
PRKCD-201ENST00000330452 PHF8Q9UPP1 1060 aa20.68■□□□□ 0.9
PRKCD-201ENST00000330452 PTPRCP08575 1304 aa20.68■□□□□ 0.9
PRKCD-201ENST00000330452 SLC4A10Q6U841 1118 aa20.68■□□□□ 0.9
PRKCD-201ENST00000330452 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
PRKCD-201ENST00000330452 GAS2L2Q8NHY3 880 aa20.67■□□□□ 0.9
PRKCD-201ENST00000330452 EYA1Q99502 592 aa20.67■□□□□ 0.9
PRKCD-201ENST00000330452 TOPAZ1Q8N9V7 1692 aa20.67■□□□□ 0.9
PRKCD-201ENST00000330452 RTF1Q92541 710 aaKnown RBP20.67■□□□□ 0.9
PRKCD-201ENST00000330452 PSME1Q06323 249 aa20.66■□□□□ 0.9
PRKCD-201ENST00000330452 SSH2Q76I76 1423 aa20.66■□□□□ 0.9
PRKCD-201ENST00000330452 ANKRD7Q92527 254 aa20.66■□□□□ 0.9
PRKCD-201ENST00000330452 CIZ1Q9ULV3 898 aaPredicted RBP20.66■□□□□ 0.9
PRKCD-201ENST00000330452 LOC102724159A0A0B4J2E5 919 aa20.66■□□□□ 0.9
PRKCD-201ENST00000330452 PWP2Q15269 919 aaKnown RBP20.66■□□□□ 0.9
PRKCD-201ENST00000330452 CALCOCO1Q9P1Z2 691 aa20.66■□□□□ 0.9
PRKCD-201ENST00000330452 EFCC1Q9HA90 598 aa20.65■□□□□ 0.9
PRKCD-201ENST00000330452 RGPD1P0DJD0 1748 aa20.65■□□□□ 0.9
PRKCD-201ENST00000330452 HSP90B1P14625 803 aaKnown RBP20.65■□□□□ 0.9
PRKCD-201ENST00000330452 DDX49Q9Y6V7 483 aaKnown RBP20.65■□□□□ 0.9
PRKCD-201ENST00000330452 SDSP20132 328 aa20.64■□□□□ 0.9
PRKCD-201ENST00000330452 ARHGEF10O15013 1369 aa20.64■□□□□ 0.89
PRKCD-201ENST00000330452 FEZ2Q9UHY8 353 aaPredicted RBP20.63■□□□□ 0.89
PRKCD-201ENST00000330452 NALCNQ8IZF0 1738 aa20.63■□□□□ 0.89
PRKCD-201ENST00000330452 USP26Q9BXU7 913 aa20.63■□□□□ 0.89
PRKCD-201ENST00000330452 PATL2C9JE40 543 aaKnown RBP20.62■□□□□ 0.89
PRKCD-201ENST00000330452 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
PRKCD-201ENST00000330452 TTC21AQ8NDW8 1320 aa20.62■□□□□ 0.89
PRKCD-201ENST00000330452 PROSER2Q86WR7 435 aaPredicted RBP20.62■□□□□ 0.89
PRKCD-201ENST00000330452 FLT4P35916 1363 aa20.62■□□□□ 0.89
PRKCD-201ENST00000330452 XRN1Q8IZH2 1706 aaKnown RBP20.62■□□□□ 0.89
PRKCD-201ENST00000330452 TULP1O00294 542 aaPredicted RBP20.61■□□□□ 0.89
PRKCD-201ENST00000330452 SSFA2P28290 1259 aa20.61■□□□□ 0.89
PRKCD-201ENST00000330452 TERF2Q15554 542 aa20.61■□□□□ 0.89
PRKCD-201ENST00000330452 SBNO1A3KN83 1393 aa20.61■□□□□ 0.89
PRKCD-201ENST00000330452 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.61■□□□□ 0.89
PRKCD-201ENST00000330452 HOXC9P31274 260 aa20.6■□□□□ 0.89
PRKCD-201ENST00000330452 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
PRKCD-201ENST00000330452 LRRC59Q96AG4 307 aaKnown RBP20.6■□□□□ 0.89
PRKCD-201ENST00000330452 RABEP1Q15276 862 aa20.59■□□□□ 0.89
PRKCD-201ENST00000330452 IGSF1Q8N6C5 1336 aa20.59■□□□□ 0.89
PRKCD-201ENST00000330452 PIK3C2AO00443 1686 aa20.59■□□□□ 0.89
PRKCD-201ENST00000330452 KDRP35968 1356 aa20.58■□□□□ 0.89
PRKCD-201ENST00000330452 NPHP4O75161 1426 aaPredicted RBP20.58■□□□□ 0.89
PRKCD-201ENST00000330452 PRIM1P49642 420 aaKnown RBP20.58■□□□□ 0.89
PRKCD-201ENST00000330452 TRERF1Q96PN7 1200 aa20.58■□□□□ 0.89
PRKCD-201ENST00000330452 GOLGA6L22H0YM25 854 aa20.58■□□□□ 0.88
PRKCD-201ENST00000330452 EP400NLQ6ZTU2 488 aa20.57■□□□□ 0.88
PRKCD-201ENST00000330452 EXOC6BQ9Y2D4 811 aa20.57■□□□□ 0.88
PRKCD-201ENST00000330452 ADAMTSL3P82987 1691 aa20.57■□□□□ 0.88
PRKCD-201ENST00000330452 HMMRO75330 724 aa20.57■□□□□ 0.88
PRKCD-201ENST00000330452 CCT4P50991 539 aaKnown RBP20.57■□□□□ 0.88
PRKCD-201ENST00000330452 PIBF1Q8WXW3 757 aa20.57■□□□□ 0.88
PRKCD-201ENST00000330452 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
PRKCD-201ENST00000330452 NOLC1Q14978 699 aaKnown RBP eCLIP20.56■□□□□ 0.88
PRKCD-201ENST00000330452 TMED8Q6PL24 325 aaPredicted RBP20.56■□□□□ 0.88
PRKCD-201ENST00000330452 STK31Q9BXU1 1019 aa20.56■□□□□ 0.88
PRKCD-201ENST00000330452 ERICH4A6NGS2 130 aa20.55■□□□□ 0.88
PRKCD-201ENST00000330452 PTMAP06454 111 aaKnown RBP20.55■□□□□ 0.88
PRKCD-201ENST00000330452 CARD10Q9BWT7 1032 aa20.55■□□□□ 0.88
PRKCD-201ENST00000330452 CAVIN1Q6NZI2 390 aaKnown RBP20.55■□□□□ 0.88
PRKCD-201ENST00000330452 CASC1Q6TDU7 716 aa20.55■□□□□ 0.88
PRKCD-201ENST00000330452 FKBP5Q13451 457 aaPredicted RBP20.54■□□□□ 0.88
PRKCD-201ENST00000330452 FMN2Q9NZ56 1722 aa20.54■□□□□ 0.88
PRKCD-201ENST00000330452 GNAI2P04899 355 aa20.54■□□□□ 0.88
PRKCD-201ENST00000330452 PDE1AP54750 535 aa20.54■□□□□ 0.88
PRKCD-201ENST00000330452 FLIIQ13045 1269 aa20.54■□□□□ 0.88
PRKCD-201ENST00000330452 CTNNA3Q9UI47 895 aa20.54■□□□□ 0.88
PRKCD-201ENST00000330452 TNNT3P45378 269 aaPredicted RBP20.53■□□□□ 0.88
PRKCD-201ENST00000330452 GRIPAP1Q4V328 841 aa20.53■□□□□ 0.88
PRKCD-201ENST00000330452 CABLES1Q8TDN4 633 aa20.53■□□□□ 0.88
PRKCD-201ENST00000330452 GNAT3A8MTJ3 354 aa20.52■□□□□ 0.88
PRKCD-201ENST00000330452 ZC3H6P61129 1189 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms