RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 UBR3Q6ZT12 1888 aa26.28■■□□□ 1.8
RAB11B-201ENST00000328024 GNAI1P63096 354 aa26.28■■□□□ 1.8
RAB11B-201ENST00000328024 SPINK5Q9NQ38 1064 aaPredicted RBP26.28■■□□□ 1.8
RAB11B-201ENST00000328024 COL23A1Q86Y22 540 aaPredicted RBP26.27■■□□□ 1.8
RAB11B-201ENST00000328024 NGEFQ8N5V2 710 aa26.27■■□□□ 1.8
RAB11B-201ENST00000328024 HMGB2P26583 209 aaKnown RBP26.26■■□□□ 1.79
RAB11B-201ENST00000328024 WDR63Q8IWG1 891 aa26.26■■□□□ 1.79
RAB11B-201ENST00000328024 QSER1Q2KHR3 1735 aa26.25■■□□□ 1.79
RAB11B-201ENST00000328024 TEX13AQ9BXU3 409 aaPredicted RBP26.25■■□□□ 1.79
RAB11B-201ENST00000328024 CCDC87Q9NVE4 849 aa26.25■■□□□ 1.79
RAB11B-201ENST00000328024 ZBTB1Q9Y2K1 713 aa26.25■■□□□ 1.79
RAB11B-201ENST00000328024 GTF3C3Q9Y5Q9 886 aa26.25■■□□□ 1.79
RAB11B-201ENST00000328024 CASZ1Q86V15 1759 aa26.25■■□□□ 1.79
RAB11B-201ENST00000328024 PHF14O94880 888 aa26.25■■□□□ 1.79
RAB11B-201ENST00000328024 A1BGP04217 495 aa26.25■■□□□ 1.79
RAB11B-201ENST00000328024 TSR2Q969E8 191 aaKnown RBP26.25■■□□□ 1.79
RAB11B-201ENST00000328024 IL16Q14005 1332 aa26.25■■□□□ 1.79
RAB11B-201ENST00000328024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.24■■□□□ 1.79
RAB11B-201ENST00000328024 RPS6KA4O75676 772 aa26.24■■□□□ 1.79
RAB11B-201ENST00000328024 STARD3NLO95772 234 aa26.24■■□□□ 1.79
RAB11B-201ENST00000328024 PIP4K2AP48426 406 aaPredicted RBP26.22■■□□□ 1.79
RAB11B-201ENST00000328024 RTCBQ9Y3I0 505 aaKnown RBP26.22■■□□□ 1.79
RAB11B-201ENST00000328024 CANXP27824 592 aaKnown RBP26.21■■□□□ 1.79
RAB11B-201ENST00000328024 SSFA2P28290 1259 aa26.21■■□□□ 1.79
RAB11B-201ENST00000328024 ARHGEF1Q92888 912 aaKnown RBP26.2■■□□□ 1.78
RAB11B-201ENST00000328024 SOS1Q07889 1333 aaPredicted RBP26.2■■□□□ 1.78
RAB11B-201ENST00000328024 NBPF26B4DH59 902 aa26.19■■□□□ 1.78
RAB11B-201ENST00000328024 NBPF10Q6P3W6 841 aaKnown RBP26.19■■□□□ 1.78
RAB11B-201ENST00000328024 NBPF15Q8N660 670 aa26.19■■□□□ 1.78
RAB11B-201ENST00000328024 LAMB4A4D0S4 1761 aa26.19■■□□□ 1.78
RAB11B-201ENST00000328024 C8orf58Q8NAV2 365 aa26.18■■□□□ 1.78
RAB11B-201ENST00000328024 ZBTB7AO95365 584 aa26.18■■□□□ 1.78
RAB11B-201ENST00000328024 TRAPPC3LQ5T215 181 aa26.18■■□□□ 1.78
RAB11B-201ENST00000328024 FLAD1Q8NFF5 587 aa26.18■■□□□ 1.78
RAB11B-201ENST00000328024 FANCIQ9NVI1 1328 aa26.17■■□□□ 1.78
RAB11B-201ENST00000328024 MSH5O43196 834 aa26.17■■□□□ 1.78
RAB11B-201ENST00000328024 ELL2O00472 640 aaPredicted RBP26.16■■□□□ 1.78
RAB11B-201ENST00000328024 EIF5P55010 431 aaKnown RBP26.16■■□□□ 1.78
RAB11B-201ENST00000328024 DUSP27Q5VZP5 1158 aa26.16■■□□□ 1.78
RAB11B-201ENST00000328024 TSPYL6Q8N831 410 aa26.16■■□□□ 1.78
RAB11B-201ENST00000328024 EIF2S2P20042 333 aaKnown RBP26.15■■□□□ 1.78
RAB11B-201ENST00000328024 HNRNPUQ00839 825 aaKnown RBP eCLIP26.15■■□□□ 1.78
RAB11B-201ENST00000328024 CDCA7LQ96GN5 454 aa26.15■■□□□ 1.78
RAB11B-201ENST00000328024 ADRA2BP18089 450 aa26.14■■□□□ 1.78
RAB11B-201ENST00000328024 NECTIN2Q92692 538 aa26.14■■□□□ 1.78
RAB11B-201ENST00000328024 C4AP0C0L4 1744 aa26.13■■□□□ 1.77
RAB11B-201ENST00000328024 IL6STP40189 918 aaPredicted RBP26.13■■□□□ 1.77
RAB11B-201ENST00000328024 GOLGA2Q08379 1002 aa26.13■■□□□ 1.77
RAB11B-201ENST00000328024 ATF5Q9Y2D1 282 aaPredicted RBP26.13■■□□□ 1.77
RAB11B-201ENST00000328024 COL15A1P39059 1388 aa26.13■■□□□ 1.77
RAB11B-201ENST00000328024 SRCAPQ6ZRS2 3230 aa26.13■■□□□ 1.77
RAB11B-201ENST00000328024 PDIA6Q15084 440 aa26.12■■□□□ 1.77
RAB11B-201ENST00000328024 SRP68Q9UHB9 627 aaKnown RBP26.12■■□□□ 1.77
RAB11B-201ENST00000328024 SLC16A10Q8TF71 515 aa26.12■■□□□ 1.77
RAB11B-201ENST00000328024 MTFR1LQ9H019 292 aa26.11■■□□□ 1.77
RAB11B-201ENST00000328024 ZNF330Q9Y3S2 320 aaPredicted RBP26.11■■□□□ 1.77
RAB11B-201ENST00000328024 HOXB7P09629 217 aa26.1■■□□□ 1.77
RAB11B-201ENST00000328024 RFC4P35249 363 aa26.1■■□□□ 1.77
RAB11B-201ENST00000328024 SLFN5Q08AF3 891 aa26.1■■□□□ 1.77
RAB11B-201ENST00000328024 PROSER3Q2NL68 480 aa26.1■■□□□ 1.77
RAB11B-201ENST00000328024 MSL1Q68DK7 614 aa26.1■■□□□ 1.77
RAB11B-201ENST00000328024 ANXA1P04083 346 aa26.1■■□□□ 1.77
RAB11B-201ENST00000328024 EXOSC9Q06265 439 aaKnown RBP26.1■■□□□ 1.77
RAB11B-201ENST00000328024 LRP10Q7Z4F1 713 aa26.1■■□□□ 1.77
RAB11B-201ENST00000328024 MYH16Q9H6N6 1097 aa26.09■■□□□ 1.77
RAB11B-201ENST00000328024 MYL6BP14649 208 aa26.08■■□□□ 1.77
RAB11B-201ENST00000328024 HDGFL1Q5TGJ6 251 aa26.08■■□□□ 1.77
RAB11B-201ENST00000328024 TBC1D2BQ9UPU7 963 aa26.08■■□□□ 1.77
RAB11B-201ENST00000328024 USP42Q9H9J4 1324 aaKnown RBP26.08■■□□□ 1.77
RAB11B-201ENST00000328024 GYS1P13807 737 aa26.07■■□□□ 1.76
RAB11B-201ENST00000328024 PTGER2P43116 358 aa26.07■■□□□ 1.76
RAB11B-201ENST00000328024 SGIP1Q9BQI5 828 aa26.07■■□□□ 1.76
RAB11B-201ENST00000328024 E9PSI1 815 aa26.07■■□□□ 1.76
RAB11B-201ENST00000328024 USPL1Q5W0Q7 1092 aa26.07■■□□□ 1.76
RAB11B-201ENST00000328024 TRMT2AQ8IZ69 625 aaKnown RBP26.07■■□□□ 1.76
RAB11B-201ENST00000328024 BCL2L12Q9HB09 334 aa26.07■■□□□ 1.76
RAB11B-201ENST00000328024 SPON1Q9HCB6 807 aa26.07■■□□□ 1.76
RAB11B-201ENST00000328024 NARFQ9UHQ1 456 aa26.07■■□□□ 1.76
RAB11B-201ENST00000328024 TWISTNBQ3B726 338 aaPredicted RBP26.06■■□□□ 1.76
RAB11B-201ENST00000328024 ERBB4Q15303 1308 aa26.06■■□□□ 1.76
RAB11B-201ENST00000328024 COL24A1Q17RW2 1714 aa26.06■■□□□ 1.76
RAB11B-201ENST00000328024 CHPF2Q9P2E5 772 aa26.05■■□□□ 1.76
RAB11B-201ENST00000328024 A0A087WZG4 1122 aa26.04■■□□□ 1.76
RAB11B-201ENST00000328024 VAMP4O75379 141 aa26.04■■□□□ 1.76
RAB11B-201ENST00000328024 FKBP8Q14318 412 aa26.04■■□□□ 1.76
RAB11B-201ENST00000328024 DZIP3Q86Y13 1208 aaKnown RBP26.03■■□□□ 1.76
RAB11B-201ENST00000328024 DDX21Q9NR30 783 aaKnown RBP eCLIP26.03■■□□□ 1.76
RAB11B-201ENST00000328024 ZPR1O75312 459 aa26.02■■□□□ 1.76
RAB11B-201ENST00000328024 CAMTA2O94983 1202 aa26.02■■□□□ 1.76
RAB11B-201ENST00000328024 TTLL7Q6ZT98 887 aa26.02■■□□□ 1.76
RAB11B-201ENST00000328024 ARXQ96QS3 562 aa26.02■■□□□ 1.76
RAB11B-201ENST00000328024 TCERG1O14776 1098 aaKnown RBP26.02■■□□□ 1.76
RAB11B-201ENST00000328024 DBF4Q9UBU7 674 aaPredicted RBP26■■□□□ 1.75
RAB11B-201ENST00000328024 ZBED9Q6R2W3 1325 aa25.99■■□□□ 1.75
RAB11B-201ENST00000328024 NPM2Q86SE8 214 aaKnown RBP25.99■■□□□ 1.75
RAB11B-201ENST00000328024 NLGN1Q8N2Q7 840 aa25.99■■□□□ 1.75
RAB11B-201ENST00000328024 LRP5O75197 1615 aa25.99■■□□□ 1.75
RAB11B-201ENST00000328024 SCN7AQ01118 1682 aa25.98■■□□□ 1.75
RAB11B-201ENST00000328024 HLFQ16534 295 aa25.97■■□□□ 1.75
RAB11B-201ENST00000328024 CCDC30Q5VVM6 783 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms