RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 ERICH4A6NGS2 130 aa19.41■□□□□ 0.7
SFXN1-201ENST00000321442 VAMP4O75379 141 aa19.41■□□□□ 0.7
SFXN1-201ENST00000321442 GPS2Q13227 327 aa19.41■□□□□ 0.7
SFXN1-201ENST00000321442 PPP4R3BQ5MIZ7 849 aa19.41■□□□□ 0.7
SFXN1-201ENST00000321442 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
SFXN1-201ENST00000321442 ZMYM4Q5VZL5 1548 aa19.41■□□□□ 0.7
SFXN1-201ENST00000321442 PPFIA3O75145 1194 aa19.41■□□□□ 0.7
SFXN1-201ENST00000321442 DTNBO60941 627 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 FLIIQ13045 1269 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 GAS2L3Q86XJ1 694 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 LIMCH1Q9UPQ0 1083 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 IL16Q14005 1332 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 PI4KAP2A4QPH2 592 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 RAB11FIP3O75154 756 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 MRPL50Q8N5N7 158 aaKnown RBP19.4■□□□□ 0.7
SFXN1-201ENST00000321442 PI4KAP1Q8N8J0 262 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 DYNC1I1O14576 645 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 STX6O43752 255 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 AKAP17AQ02040 695 aaKnown RBP19.4■□□□□ 0.7
SFXN1-201ENST00000321442 ZBTB3Q9H5J0 574 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 ZFYVE16Q7Z3T8 1539 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 RBM25P49756 843 aaKnown RBP19.4■□□□□ 0.7
SFXN1-201ENST00000321442 PDE1AP54750 535 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 PLEKHM2Q8IWE5 1019 aa19.4■□□□□ 0.7
SFXN1-201ENST00000321442 TPM1P09493 284 aa19.39■□□□□ 0.69
SFXN1-201ENST00000321442 NSD2O96028 1365 aa19.39■□□□□ 0.69
SFXN1-201ENST00000321442 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.69
SFXN1-201ENST00000321442 TRMT1Q9NXH9 659 aaKnown RBP19.39■□□□□ 0.69
SFXN1-201ENST00000321442 BLMP54132 1417 aaPredicted RBP19.39■□□□□ 0.69
SFXN1-201ENST00000321442 USP48Q86UV5 1035 aa19.39■□□□□ 0.69
SFXN1-201ENST00000321442 TCEANC2Q96MN5 208 aa19.39■□□□□ 0.69
SFXN1-201ENST00000321442 BOLA2Q9H3K6 86 aa19.39■□□□□ 0.69
SFXN1-201ENST00000321442 IGSF3O75054 1194 aa19.38■□□□□ 0.69
SFXN1-201ENST00000321442 MCM5P33992 734 aa19.38■□□□□ 0.69
SFXN1-201ENST00000321442 TSR1Q2NL82 804 aaKnown RBP19.38■□□□□ 0.69
SFXN1-201ENST00000321442 ZSCAN31Q96LW9 406 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-201ENST00000321442 CNPY2Q9Y2B0 182 aa19.38■□□□□ 0.69
SFXN1-201ENST00000321442 NOLC1Q14978 699 aaKnown RBP eCLIP19.38■□□□□ 0.69
SFXN1-201ENST00000321442 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
SFXN1-201ENST00000321442 ARHGAP45Q92619 1136 aa19.38■□□□□ 0.69
SFXN1-201ENST00000321442 SKIDA1Q1XH10 827 aa19.37■□□□□ 0.69
SFXN1-201ENST00000321442 NGLY1Q96IV0 654 aa19.37■□□□□ 0.69
SFXN1-201ENST00000321442 ZBTB7BO15156 539 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-201ENST00000321442 NOC3LQ8WTT2 800 aaKnown RBP19.37■□□□□ 0.69
SFXN1-201ENST00000321442 G3V3G9 751 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 HIP1O00291 1037 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 TNNT1P13805 278 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 DCAF8Q5TAQ9 597 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 MYD88Q99836 296 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 CCDC66A2RUB6 948 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 GLRX3O76003 335 aaKnown RBP19.36■□□□□ 0.69
SFXN1-201ENST00000321442 GPTP24298 496 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 ANKRD1Q15327 319 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 PODXL2Q9NZ53 605 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
SFXN1-201ENST00000321442 ERC1Q8IUD2 1116 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 KLHL34Q8N239 644 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 NECAB1Q8N987 351 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 CCDC8Q9H0W5 538 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-201ENST00000321442 SERPINC1P01008 464 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 GJB2P29033 226 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 CHAMP1Q96JM3 812 aa19.36■□□□□ 0.69
SFXN1-201ENST00000321442 EIF2AK4Q9P2K8 1649 aaKnown RBP19.35■□□□□ 0.69
SFXN1-201ENST00000321442 HOXC9P31274 260 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 GUCY1B3Q02153 619 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 VPS37DQ86XT2 251 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 USP26Q9BXU7 913 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 CHPF2Q9P2E5 772 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 ADCY10Q96PN6 1610 aa19.35■□□□□ 0.69
SFXN1-201ENST00000321442 OLFM4Q6UX06 510 aa19.34■□□□□ 0.69
SFXN1-201ENST00000321442 ACSBG1Q96GR2 724 aa19.34■□□□□ 0.69
SFXN1-201ENST00000321442 BRPF1P55201 1214 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-201ENST00000321442 CDC42BPBQ9Y5S2 1711 aa19.34■□□□□ 0.69
SFXN1-201ENST00000321442 IL13P35225 146 aa19.34■□□□□ 0.69
SFXN1-201ENST00000321442 PTPN14Q15678 1187 aa19.34■□□□□ 0.69
SFXN1-201ENST00000321442 LGR6Q9HBX8 967 aa19.34■□□□□ 0.69
SFXN1-201ENST00000321442 ZNF396Q96N95 335 aaPredicted RBP19.33■□□□□ 0.69
SFXN1-201ENST00000321442 PDE4CQ08493 712 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 G2E3Q7L622 706 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 CEP57L1Q8IYX8 460 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 ESYT1Q9BSJ8 1104 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 MSH6P52701 1360 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 UBE2HP62256 183 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 TMOD3Q9NYL9 352 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 CLIP2Q9UDT6 1046 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 CFAP45Q9UL16 551 aa19.33■□□□□ 0.68
SFXN1-201ENST00000321442 PPP1R42Q7Z4L9 355 aa19.32■□□□□ 0.68
SFXN1-201ENST00000321442 PCMTD1Q96MG8 357 aaPredicted RBP19.32■□□□□ 0.68
SFXN1-201ENST00000321442 ZNF165P49910 485 aa19.32■□□□□ 0.68
SFXN1-201ENST00000321442 TTC21AQ8NDW8 1320 aa19.32■□□□□ 0.68
SFXN1-201ENST00000321442 PRR36Q9H6K5 1346 aa19.32■□□□□ 0.68
SFXN1-201ENST00000321442 ROBO2Q9HCK4 1378 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 SCAND2PQ9GZW5 306 aaPredicted RBP19.31■□□□□ 0.68
SFXN1-201ENST00000321442 ANTXR1Q9H6X2 564 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 SAFBQ15424 915 aaKnown RBP eCLIP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms