RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 RBM6P78332 1123 aaKnown RBP12.81□□□□□ -0.36
GINS3-201ENST00000318129 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
GINS3-201ENST00000318129 CACNA1FO60840 1977 aa12.81□□□□□ -0.36
GINS3-201ENST00000318129 ITGB4P16144 1822 aa12.81□□□□□ -0.36
GINS3-201ENST00000318129 RRP9O43818 475 aaKnown RBP12.81□□□□□ -0.36
GINS3-201ENST00000318129 SEPT12Q8IYM1 358 aa12.81□□□□□ -0.36
GINS3-201ENST00000318129 PIGBQ92521 554 aa12.81□□□□□ -0.36
GINS3-201ENST00000318129 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
GINS3-201ENST00000318129 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
GINS3-201ENST00000318129 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
GINS3-201ENST00000318129 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
GINS3-201ENST00000318129 BCL9O00512 1426 aa12.8□□□□□ -0.36
GINS3-201ENST00000318129 PRIM1P49642 420 aaKnown RBP12.79□□□□□ -0.36
GINS3-201ENST00000318129 HSP90AA2PQ14568 343 aaPredicted RBP12.79□□□□□ -0.36
GINS3-201ENST00000318129 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
GINS3-201ENST00000318129 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
GINS3-201ENST00000318129 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
GINS3-201ENST00000318129 PAPPAQ13219 1627 aa12.79□□□□□ -0.36
GINS3-201ENST00000318129 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
GINS3-201ENST00000318129 API5Q9BZZ5 524 aaKnown RBP12.78□□□□□ -0.36
GINS3-201ENST00000318129 PTPRCP08575 1304 aa12.78□□□□□ -0.36
GINS3-201ENST00000318129 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
GINS3-201ENST00000318129 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
GINS3-201ENST00000318129 PODXL2Q9NZ53 605 aa12.78□□□□□ -0.36
GINS3-201ENST00000318129 DOT1LQ8TEK3 1739 aa12.78□□□□□ -0.36
GINS3-201ENST00000318129 UBR2Q8IWV8 1755 aa12.77□□□□□ -0.36
GINS3-201ENST00000318129 DZIP1LQ8IYY4 767 aaKnown RBP12.77□□□□□ -0.36
GINS3-201ENST00000318129 ATG3Q9NT62 314 aa12.77□□□□□ -0.36
GINS3-201ENST00000318129 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
GINS3-201ENST00000318129 FTSJ3Q8IY81 847 aaKnown RBP12.77□□□□□ -0.37
GINS3-201ENST00000318129 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
GINS3-201ENST00000318129 DBF4Q9UBU7 674 aaPredicted RBP12.77□□□□□ -0.37
GINS3-201ENST00000318129 TRIM27P14373 513 aa12.76□□□□□ -0.37
GINS3-201ENST00000318129 RXRBP28702 533 aa12.76□□□□□ -0.37
GINS3-201ENST00000318129 C20orf194Q5TEA3 1177 aa12.76□□□□□ -0.37
GINS3-201ENST00000318129 ACSBG1Q96GR2 724 aa12.76□□□□□ -0.37
GINS3-201ENST00000318129 ASAP1Q9ULH1 1129 aa12.76□□□□□ -0.37
GINS3-201ENST00000318129 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
GINS3-201ENST00000318129 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
GINS3-201ENST00000318129 AAMPQ13685 434 aa12.75□□□□□ -0.37
GINS3-201ENST00000318129 CRBNQ96SW2 442 aa12.75□□□□□ -0.37
GINS3-201ENST00000318129 HYPKQ9NX55 129 aa12.75□□□□□ -0.37
GINS3-201ENST00000318129 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
GINS3-201ENST00000318129 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
GINS3-201ENST00000318129 PANK1Q8TE04 598 aa12.74□□□□□ -0.37
GINS3-201ENST00000318129 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
GINS3-201ENST00000318129 ERBB4Q15303 1308 aa12.74□□□□□ -0.37
GINS3-201ENST00000318129 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
GINS3-201ENST00000318129 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
GINS3-201ENST00000318129 PRAMEF22A3QJZ6 481 aa12.73□□□□□ -0.37
GINS3-201ENST00000318129 FLIIQ13045 1269 aa12.73□□□□□ -0.37
GINS3-201ENST00000318129 L1TD1Q5T7N2 865 aaKnown RBP12.73□□□□□ -0.37
GINS3-201ENST00000318129 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
GINS3-201ENST00000318129 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
GINS3-201ENST00000318129 CHMP4BQ9H444 224 aaKnown RBP12.73□□□□□ -0.37
GINS3-201ENST00000318129 USP16Q9Y5T5 823 aa12.73□□□□□ -0.37
GINS3-201ENST00000318129 CLUAP1Q96AJ1 413 aa12.73□□□□□ -0.37
GINS3-201ENST00000318129 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
GINS3-201ENST00000318129 C5P01031 1676 aa12.73□□□□□ -0.37
GINS3-201ENST00000318129 LAMB4A4D0S4 1761 aa12.73□□□□□ -0.37
GINS3-201ENST00000318129 STARD3NLO95772 234 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 RLBP1P12271 317 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 CLCN1P35523 988 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
GINS3-201ENST00000318129 G2E3Q7L622 706 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 ABCC4O15439 1325 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 KCNQ2O43526 872 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 C8orf34Q49A92 452 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 RGS17Q9UGC6 210 aaPredicted RBP12.72□□□□□ -0.37
GINS3-201ENST00000318129 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 COG6Q9Y2V7 657 aa12.72□□□□□ -0.37
GINS3-201ENST00000318129 NHSQ6T4R5 1651 aa12.71□□□□□ -0.37
GINS3-201ENST00000318129 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
GINS3-201ENST00000318129 PDIA6Q15084 440 aa12.71□□□□□ -0.37
GINS3-201ENST00000318129 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
GINS3-201ENST00000318129 TNNQ9UQP3 1299 aa12.71□□□□□ -0.37
GINS3-201ENST00000318129 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.38
GINS3-201ENST00000318129 BRWD3Q6RI45 1802 aa12.7□□□□□ -0.38
GINS3-201ENST00000318129 PALLDQ8WX93 1383 aa12.7□□□□□ -0.38
GINS3-201ENST00000318129 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
GINS3-201ENST00000318129 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
GINS3-201ENST00000318129 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
GINS3-201ENST00000318129 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
GINS3-201ENST00000318129 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
GINS3-201ENST00000318129 CCT4P50991 539 aaKnown RBP12.69□□□□□ -0.38
GINS3-201ENST00000318129 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
GINS3-201ENST00000318129 DNAJC10Q8IXB1 793 aa12.69□□□□□ -0.38
GINS3-201ENST00000318129 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
GINS3-201ENST00000318129 RGS12O14924 1447 aa12.69□□□□□ -0.38
GINS3-201ENST00000318129 LOC102724428A0A0B4J2F2 783 aa12.69□□□□□ -0.38
GINS3-201ENST00000318129 SIK1P57059 783 aa12.69□□□□□ -0.38
GINS3-201ENST00000318129 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
GINS3-201ENST00000318129 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
GINS3-201ENST00000318129 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
GINS3-201ENST00000318129 ANXA1P04083 346 aa12.68□□□□□ -0.38
GINS3-201ENST00000318129 MYL6BP14649 208 aa12.68□□□□□ -0.38
GINS3-201ENST00000318129 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
GINS3-201ENST00000318129 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
GINS3-201ENST00000318129 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
GINS3-201ENST00000318129 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms