RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
LRP8-201ENST00000306052 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
LRP8-201ENST00000306052 GTF2F1P35269 517 aaKnown RBP eCLIP17.04■□□□□ 0.32
LRP8-201ENST00000306052 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
LRP8-201ENST00000306052 PTPN14Q15678 1187 aa17.03■□□□□ 0.32
LRP8-201ENST00000306052 LRRCC1Q9C099 1032 aa17.03■□□□□ 0.32
LRP8-201ENST00000306052 EZRP15311 586 aaKnown RBP17.03■□□□□ 0.32
LRP8-201ENST00000306052 IGHMBP2P38935 993 aaKnown RBP17.03■□□□□ 0.32
LRP8-201ENST00000306052 SLC3A2P08195 630 aaKnown RBP17.03■□□□□ 0.32
LRP8-201ENST00000306052 NF2P35240 595 aa17.03■□□□□ 0.32
LRP8-201ENST00000306052 DDB1Q16531 1140 aa17.03■□□□□ 0.32
LRP8-201ENST00000306052 SSFA2P28290 1259 aa17.03■□□□□ 0.32
LRP8-201ENST00000306052 CCT4P50991 539 aaKnown RBP17.03■□□□□ 0.32
LRP8-201ENST00000306052 STK38Q15208 465 aa17.03■□□□□ 0.32
LRP8-201ENST00000306052 ME1P48163 572 aa17.03■□□□□ 0.32
LRP8-201ENST00000306052 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
LRP8-201ENST00000306052 RFC4P35249 363 aa17.02■□□□□ 0.32
LRP8-201ENST00000306052 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.32
LRP8-201ENST00000306052 LARP1BQ659C4 914 aaKnown RBP17.02■□□□□ 0.31
LRP8-201ENST00000306052 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
LRP8-201ENST00000306052 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
LRP8-201ENST00000306052 ZFP91Q96JP5 570 aaPredicted RBP17.01■□□□□ 0.31
LRP8-201ENST00000306052 SPATA32Q96LK8 384 aa17.01■□□□□ 0.31
LRP8-201ENST00000306052 CLCN1P35523 988 aa17.01■□□□□ 0.31
LRP8-201ENST00000306052 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
LRP8-201ENST00000306052 RBM25P49756 843 aaKnown RBP17.01■□□□□ 0.31
LRP8-201ENST00000306052 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
LRP8-201ENST00000306052 PTPRKQ15262 1439 aa17■□□□□ 0.31
LRP8-201ENST00000306052 SSBP05455 408 aaKnown RBP eCLIP17■□□□□ 0.31
LRP8-201ENST00000306052 CHMP4BP1P59074 171 aa17■□□□□ 0.31
LRP8-201ENST00000306052 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
LRP8-201ENST00000306052 ERC1Q8IUD2 1116 aa17■□□□□ 0.31
LRP8-201ENST00000306052 CYP46A1Q9Y6A2 500 aa17■□□□□ 0.31
LRP8-201ENST00000306052 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
LRP8-201ENST00000306052 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
LRP8-201ENST00000306052 ANKIB1Q9P2G1 1089 aa17■□□□□ 0.31
LRP8-201ENST00000306052 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
LRP8-201ENST00000306052 USP25Q9UHP3 1055 aa17■□□□□ 0.31
LRP8-201ENST00000306052 TNNT1P13805 278 aa17■□□□□ 0.31
LRP8-201ENST00000306052 PANK2Q9BZ23 570 aa17■□□□□ 0.31
LRP8-201ENST00000306052 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
LRP8-201ENST00000306052 RPRD2Q5VT52 1461 aaKnown RBP17■□□□□ 0.31
LRP8-201ENST00000306052 C11orf95C9JLR9 678 aaPredicted RBP17■□□□□ 0.31
LRP8-201ENST00000306052 MYO5CQ9NQX4 1742 aa17■□□□□ 0.31
LRP8-201ENST00000306052 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
LRP8-201ENST00000306052 ZSCAN29Q8IWY8 852 aaPredicted RBP16.99■□□□□ 0.31
LRP8-201ENST00000306052 NEO1Q92859 1461 aa16.99■□□□□ 0.31
LRP8-201ENST00000306052 MAP3K11Q16584 847 aa16.99■□□□□ 0.31
LRP8-201ENST00000306052 IPO4Q8TEX9 1081 aaKnown RBP16.99■□□□□ 0.31
LRP8-201ENST00000306052 MYD88Q99836 296 aa16.99■□□□□ 0.31
LRP8-201ENST00000306052 CCDC113Q9H0I3 377 aa16.99■□□□□ 0.31
LRP8-201ENST00000306052 BTG4Q9NY30 223 aa16.99■□□□□ 0.31
LRP8-201ENST00000306052 MPHOSPH10O00566 681 aaKnown RBP16.98■□□□□ 0.31
LRP8-201ENST00000306052 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
LRP8-201ENST00000306052 GPTP24298 496 aa16.98■□□□□ 0.31
LRP8-201ENST00000306052 STIM1Q13586 685 aa16.98■□□□□ 0.31
LRP8-201ENST00000306052 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
LRP8-201ENST00000306052 CBFA2T2O43439 604 aa16.97■□□□□ 0.31
LRP8-201ENST00000306052 KIF18AQ8NI77 898 aa16.97■□□□□ 0.31
LRP8-201ENST00000306052 PSMD1Q99460 953 aa16.97■□□□□ 0.31
LRP8-201ENST00000306052 RBM27Q9P2N5 1060 aaKnown RBP16.97■□□□□ 0.31
LRP8-201ENST00000306052 FKBP4Q02790 459 aaKnown RBP eCLIP16.97■□□□□ 0.31
LRP8-201ENST00000306052 INCENPQ9NQS7 918 aa16.97■□□□□ 0.31
LRP8-201ENST00000306052 CCDC183Q5T5S1 534 aa16.97■□□□□ 0.31
LRP8-201ENST00000306052 UPF3BQ9BZI7 483 aaKnown RBP16.97■□□□□ 0.31
LRP8-201ENST00000306052 TRMT1Q9NXH9 659 aaKnown RBP16.97■□□□□ 0.31
LRP8-201ENST00000306052 TRMT112Q9UI30 125 aaKnown RBP16.97■□□□□ 0.31
LRP8-201ENST00000306052 XRCC6P12956 609 aaKnown RBP eCLIP16.97■□□□□ 0.31
LRP8-201ENST00000306052 CCDC69A6NI79 296 aa16.97■□□□□ 0.31
LRP8-201ENST00000306052 TIGD1Q96MW7 591 aa16.97■□□□□ 0.31
LRP8-201ENST00000306052 LUC7LQ9NQ29 371 aaKnown RBP16.97■□□□□ 0.31
LRP8-201ENST00000306052 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
LRP8-201ENST00000306052 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
LRP8-201ENST00000306052 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
LRP8-201ENST00000306052 TMX1Q9H3N1 280 aa16.96■□□□□ 0.31
LRP8-201ENST00000306052 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
LRP8-201ENST00000306052 KIAA1328Q86T90 577 aa16.96■□□□□ 0.31
LRP8-201ENST00000306052 CASQ1P31415 396 aa16.96■□□□□ 0.31
LRP8-201ENST00000306052 ZNF622Q969S3 477 aaKnown RBP eCLIP16.96■□□□□ 0.311e-6■■■■□ 20.1
LRP8-201ENST00000306052 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.96■□□□□ 0.319e-7■■■□□ 16.3
LRP8-201ENST00000306052 ATF7IPQ6VMQ6 1270 aa16.96■□□□□ 0.3
LRP8-201ENST00000306052 CEP126Q9P2H0 1117 aa16.95■□□□□ 0.3
LRP8-201ENST00000306052 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
LRP8-201ENST00000306052 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
LRP8-201ENST00000306052 ADCY5O95622 1261 aa16.95■□□□□ 0.3
LRP8-201ENST00000306052 MAP2K1Q02750 393 aaPredicted RBP16.95■□□□□ 0.3
LRP8-201ENST00000306052 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
LRP8-201ENST00000306052 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
LRP8-201ENST00000306052 CEP57L1Q8IYX8 460 aa16.94■□□□□ 0.3
LRP8-201ENST00000306052 URI1O94763 535 aaPredicted RBP16.94■□□□□ 0.3
LRP8-201ENST00000306052 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
LRP8-201ENST00000306052 YEATS2Q9ULM3 1422 aa16.94■□□□□ 0.3
LRP8-201ENST00000306052 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
LRP8-201ENST00000306052 PAXIP1Q6ZW49 1069 aaPredicted RBP16.94■□□□□ 0.3
LRP8-201ENST00000306052 ZNF830Q96NB3 372 aaPredicted RBP16.94■□□□□ 0.3
LRP8-201ENST00000306052 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
LRP8-201ENST00000306052 CFAP45Q9UL16 551 aa16.94■□□□□ 0.3
LRP8-201ENST00000306052 SHTN1A0MZ66 631 aa16.94■□□□□ 0.3
LRP8-201ENST00000306052 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
LRP8-201ENST00000306052 METTL24Q5JXM2 366 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms