RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 NOL7Q9UMY1 257 aaKnown RBP19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 TRAPPC8Q9Y2L5 1435 aa19.25■□□□□ 0.67
SNAPC4-201ENST00000298532 ZFYVE27Q5T4F4 411 aa19.25■□□□□ 0.67
SNAPC4-201ENST00000298532 ZC3H6P61129 1189 aaKnown RBP19.25■□□□□ 0.67
SNAPC4-201ENST00000298532 PRPF40BQ6NWY9 871 aaKnown RBP19.25■□□□□ 0.67
SNAPC4-201ENST00000298532 KRT28Q7Z3Y7 464 aa19.25■□□□□ 0.67
SNAPC4-201ENST00000298532 CENPHQ9H3R5 247 aa19.25■□□□□ 0.67
SNAPC4-201ENST00000298532 SHTN1A0MZ66 631 aa19.25■□□□□ 0.67
SNAPC4-201ENST00000298532 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 CCDC69A6NI79 296 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 MAP9Q49MG5 647 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 PLCD4Q9BRC7 762 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 NPHP3Q7Z494 1330 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 DISP1Q96F81 1524 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 RBM27Q9P2N5 1060 aaKnown RBP19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 PAXBP1Q9Y5B6 917 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 SLC3A2P08195 630 aaKnown RBP19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 CASQ1P31415 396 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 JAKMIP3Q5VZ66 844 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 NACAP1Q9BZK3 213 aa19.24■□□□□ 0.67
SNAPC4-201ENST00000298532 UHRF1BP1Q6BDS2 1440 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 KIF5CO60282 957 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 AMOTQ4VCS5 1084 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 CKAP2LQ8IYA6 745 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 ADGRF5Q8IZF2 1346 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 RIMS2Q9UQ26 1411 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 POLR3GO15318 223 aaPredicted RBP19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 BMS1Q14692 1282 aaKnown RBP19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 ZMYM3Q14202 1370 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 SPDYE4A6NLX3 237 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 FOXO3O43524 673 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 CAVIN2O95810 425 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 TOP1P11387 765 aaKnown RBP19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 C8orf34Q49A92 452 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 GDPD2Q9HCC8 539 aa19.23■□□□□ 0.67
SNAPC4-201ENST00000298532 TRMT1Q9NXH9 659 aaKnown RBP19.22■□□□□ 0.67
SNAPC4-201ENST00000298532 CTDP1Q9Y5B0 961 aaPredicted RBP19.22■□□□□ 0.67
SNAPC4-201ENST00000298532 MCM3P25205 808 aa19.22■□□□□ 0.67
SNAPC4-201ENST00000298532 UBE2HP62256 183 aa19.22■□□□□ 0.67
SNAPC4-201ENST00000298532 ZSCAN25Q6NSZ9 544 aa19.22■□□□□ 0.67
SNAPC4-201ENST00000298532 KIAA1328Q86T90 577 aa19.22■□□□□ 0.67
SNAPC4-201ENST00000298532 ZKSCAN5Q9Y2L8 839 aa19.22■□□□□ 0.67
SNAPC4-201ENST00000298532 MTMR7Q9Y216 660 aa19.22■□□□□ 0.67
SNAPC4-201ENST00000298532 SCAF11Q99590 1463 aaKnown RBP19.21■□□□□ 0.67
SNAPC4-201ENST00000298532 GTF2F1P35269 517 aaKnown RBP eCLIP19.21■□□□□ 0.672e-7■■□□□ 11.9
SNAPC4-201ENST00000298532 KIF4BQ2VIQ3 1234 aa19.21■□□□□ 0.67
SNAPC4-201ENST00000298532 WASF1Q92558 559 aa19.21■□□□□ 0.67
SNAPC4-201ENST00000298532 FAM107BQ9H098 131 aa19.21■□□□□ 0.67
SNAPC4-201ENST00000298532 STX6O43752 255 aa19.21■□□□□ 0.67
SNAPC4-201ENST00000298532 HS1BP3Q53T59 392 aa19.21■□□□□ 0.67
SNAPC4-201ENST00000298532 NOLC1Q14978 699 aaKnown RBP eCLIP19.2■□□□□ 0.66
SNAPC4-201ENST00000298532 ZRSR2Q15696 482 aaKnown RBP19.2■□□□□ 0.66
SNAPC4-201ENST00000298532 SYCP1Q15431 976 aa19.2■□□□□ 0.66
SNAPC4-201ENST00000298532 GIMAP7Q8NHV1 300 aa19.2■□□□□ 0.66
SNAPC4-201ENST00000298532 KRT18P05783 430 aaKnown RBP19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 HDAC1Q13547 482 aaPredicted RBP19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 STK11IPQ8N1F8 1099 aa19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 THUMPD2Q9BTF0 503 aaKnown RBP19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 SNX21Q969T3 373 aa19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 ZNF165P49910 485 aa19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 EIF5P55010 431 aaKnown RBP19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 KRT222Q8N1A0 295 aa19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 RPRD2Q5VT52 1461 aaKnown RBP19.19■□□□□ 0.66
SNAPC4-201ENST00000298532 POTEB2H3BUK9 544 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 TIGD1Q96MW7 591 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 TRERF1Q96PN7 1200 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 HCLS1P14317 486 aaPredicted RBP19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 NSD2O96028 1365 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 CEP135Q66GS9 1140 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 SNW1Q13573 536 aaKnown RBP19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 STX1AQ16623 288 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 C19orf44Q9H6X5 657 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 CNNM1Q9NRU3 951 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 CEP131Q9UPN4 1083 aa19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
SNAPC4-201ENST00000298532 CFAP74Q9C0B2 1584 aa19.17■□□□□ 0.66
SNAPC4-201ENST00000298532 NUP133Q8WUM0 1156 aa19.17■□□□□ 0.66
SNAPC4-201ENST00000298532 STARD3NLO95772 234 aa19.17■□□□□ 0.66
SNAPC4-201ENST00000298532 IMMTQ16891 758 aaKnown RBP19.17■□□□□ 0.66
SNAPC4-201ENST00000298532 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
SNAPC4-201ENST00000298532 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
SNAPC4-201ENST00000298532 NEFHP12036 1026 aa19.17■□□□□ 0.66
SNAPC4-201ENST00000298532 TAF4BQ92750 862 aa19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 CCDC171Q6TFL3 1326 aa19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 GOLGA6L9A6NEM1 432 aa19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 TAX1BP1Q86VP1 789 aa19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 TTC21AQ8NDW8 1320 aa19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 TCOF1Q13428 1488 aaKnown RBP19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 FKBP4Q02790 459 aaKnown RBP eCLIP19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 TTC22Q5TAA0 569 aa19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 TBX22Q9Y458 520 aa19.16■□□□□ 0.66
SNAPC4-201ENST00000298532 CCDC57Q2TAC2 916 aa19.15■□□□□ 0.66
SNAPC4-201ENST00000298532 NUCB1Q02818 461 aa19.15■□□□□ 0.66
SNAPC4-201ENST00000298532 RRS1Q15050 365 aaKnown RBP19.15■□□□□ 0.66
SNAPC4-201ENST00000298532 HMGB1P09429 215 aaKnown RBP19.15■□□□□ 0.66
SNAPC4-201ENST00000298532 GJB2P29033 226 aa19.15■□□□□ 0.66
SNAPC4-201ENST00000298532 EXOC5O00471 708 aa19.14■□□□□ 0.66
SNAPC4-201ENST00000298532 ZNF397Q8NF99 534 aaPredicted RBP19.14■□□□□ 0.66
SNAPC4-201ENST00000298532 INCENPQ9NQS7 918 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms