RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 RAD50Q92878 1312 aa24.59■■□□□ 1.53
TMED4-201ENST00000289577 TCHHQ07283 1943 aa24.59■■□□□ 1.53
TMED4-201ENST00000289577 RAB11FIP3O75154 756 aa24.58■■□□□ 1.53
TMED4-201ENST00000289577 PTMAP06454 111 aaKnown RBP24.58■■□□□ 1.53
TMED4-201ENST00000289577 TTC14Q96N46 770 aa24.58■■□□□ 1.53
TMED4-201ENST00000289577 CCDC183Q5T5S1 534 aa24.58■■□□□ 1.52
TMED4-201ENST00000289577 MTERF4Q7Z6M4 381 aaKnown RBP24.57■■□□□ 1.52
TMED4-201ENST00000289577 PI4K2BQ8TCG2 481 aa24.57■■□□□ 1.52
TMED4-201ENST00000289577 SGSM2O43147 1006 aa24.57■■□□□ 1.52
TMED4-201ENST00000289577 UBTFL1P0CB47 393 aaPredicted RBP24.57■■□□□ 1.52
TMED4-201ENST00000289577 FAM69CQ0P6D2 419 aa24.57■■□□□ 1.52
TMED4-201ENST00000289577 FOXD4L6Q3SYB3 417 aaPredicted RBP24.57■■□□□ 1.52
TMED4-201ENST00000289577 FOXD4L3Q6VB84 417 aaPredicted RBP24.57■■□□□ 1.52
TMED4-201ENST00000289577 IL1RAPL2Q9NP60 686 aa24.57■■□□□ 1.52
TMED4-201ENST00000289577 BABAM1Q9NWV8 329 aa24.57■■□□□ 1.52
TMED4-201ENST00000289577 DIP2BQ9P265 1576 aa24.56■■□□□ 1.52
TMED4-201ENST00000289577 NUTM2FA1L443 756 aa24.56■■□□□ 1.52
TMED4-201ENST00000289577 POLA2Q14181 598 aa24.56■■□□□ 1.52
TMED4-201ENST00000289577 GNAT3A8MTJ3 354 aa24.55■■□□□ 1.52
TMED4-201ENST00000289577 LETM1O95202 739 aaPredicted RBP24.55■■□□□ 1.52
TMED4-201ENST00000289577 ZSCAN22P10073 491 aaPredicted RBP24.55■■□□□ 1.52
TMED4-201ENST00000289577 SNX14Q9Y5W7 946 aa24.55■■□□□ 1.52
TMED4-201ENST00000289577 PTPRUQ92729 1446 aa24.55■■□□□ 1.52
TMED4-201ENST00000289577 NUTM1Q86Y26 1132 aa24.55■■□□□ 1.52
TMED4-201ENST00000289577 KLHL34Q8N239 644 aa24.55■■□□□ 1.52
TMED4-201ENST00000289577 UBR1Q8IWV7 1749 aa24.54■■□□□ 1.52
TMED4-201ENST00000289577 LSG1Q9H089 658 aaKnown RBP24.54■■□□□ 1.52
TMED4-201ENST00000289577 NECTIN2Q92692 538 aa24.54■■□□□ 1.52
TMED4-201ENST00000289577 CNPY2Q9Y2B0 182 aa24.53■■□□□ 1.52
TMED4-201ENST00000289577 UBE2HP62256 183 aa24.53■■□□□ 1.52
TMED4-201ENST00000289577 RHPN1Q8TCX5 695 aa24.53■■□□□ 1.52
TMED4-201ENST00000289577 TNRQ92752 1358 aa24.52■■□□□ 1.52
TMED4-201ENST00000289577 AMPHP49418 695 aa24.52■■□□□ 1.52
TMED4-201ENST00000289577 PPP1R42Q7Z4L9 355 aa24.52■■□□□ 1.52
TMED4-201ENST00000289577 LIMCH1Q9UPQ0 1083 aa24.52■■□□□ 1.52
TMED4-201ENST00000289577 CRYBG1Q9Y4K1 1723 aa24.52■■□□□ 1.52
TMED4-201ENST00000289577 IL17REQ8NFR9 667 aa24.51■■□□□ 1.51
TMED4-201ENST00000289577 PIBF1Q8WXW3 757 aa24.51■■□□□ 1.51
TMED4-201ENST00000289577 TSPOAP1O95153 1857 aa24.51■■□□□ 1.51
TMED4-201ENST00000289577 STX6O43752 255 aa24.51■■□□□ 1.51
TMED4-201ENST00000289577 SURF6O75683 361 aaKnown RBP24.51■■□□□ 1.51
TMED4-201ENST00000289577 AK2P54819 239 aa24.51■■□□□ 1.51
TMED4-201ENST00000289577 RUFY3Q7L099 469 aa24.51■■□□□ 1.51
TMED4-201ENST00000289577 USP25Q9UHP3 1055 aa24.51■■□□□ 1.51
TMED4-201ENST00000289577 SYT1P21579 422 aa24.5■■□□□ 1.51
TMED4-201ENST00000289577 TAF7Q15545 349 aaPredicted RBP24.5■■□□□ 1.51
TMED4-201ENST00000289577 RASEFQ8IZ41 740 aa24.5■■□□□ 1.51
TMED4-201ENST00000289577 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.5■■□□□ 1.51
TMED4-201ENST00000289577 MAP3K5Q99683 1374 aa24.5■■□□□ 1.51
TMED4-201ENST00000289577 NWD1Q149M9 1564 aa24.5■■□□□ 1.51
TMED4-201ENST00000289577 MYRIPQ8NFW9 859 aa24.5■■□□□ 1.51
TMED4-201ENST00000289577 MAP4K4O95819 1239 aaPredicted RBP24.49■■□□□ 1.51
TMED4-201ENST00000289577 KIF1BPQ96EK5 621 aa24.49■■□□□ 1.51
TMED4-201ENST00000289577 PLEKHG1Q9ULL1 1385 aa24.49■■□□□ 1.51
TMED4-201ENST00000289577 ADCY5O95622 1261 aa24.49■■□□□ 1.51
TMED4-201ENST00000289577 F13A1P00488 732 aa24.49■■□□□ 1.51
TMED4-201ENST00000289577 CNTROBQ8N137 903 aa24.49■■□□□ 1.51
TMED4-201ENST00000289577 USP42Q9H9J4 1324 aaKnown RBP24.48■■□□□ 1.51
TMED4-201ENST00000289577 PIK3C2AO00443 1686 aa24.48■■□□□ 1.51
TMED4-201ENST00000289577 FUCA2Q9BTY2 467 aa24.47■■□□□ 1.51
TMED4-201ENST00000289577 ATP6V1DQ9Y5K8 247 aa24.47■■□□□ 1.51
TMED4-201ENST00000289577 HCLS1P14317 486 aaPredicted RBP24.47■■□□□ 1.51
TMED4-201ENST00000289577 PRIMPOLQ96LW4 560 aa24.47■■□□□ 1.51
TMED4-201ENST00000289577 NOLC1Q14978 699 aaKnown RBP eCLIP24.46■■□□□ 1.51
TMED4-201ENST00000289577 ESF1Q9H501 851 aaKnown RBP24.46■■□□□ 1.51
TMED4-201ENST00000289577 PHAXQ9H814 394 aaKnown RBP24.46■■□□□ 1.51
TMED4-201ENST00000289577 SMC3Q9UQE7 1217 aa24.46■■□□□ 1.51
TMED4-201ENST00000289577 HDGFL1Q5TGJ6 251 aa24.46■■□□□ 1.51
TMED4-201ENST00000289577 KDM4AO75164 1064 aa24.45■■□□□ 1.5
TMED4-201ENST00000289577 SPTLC3Q9NUV7 552 aa24.45■■□□□ 1.5
TMED4-201ENST00000289577 SRGAP3O43295 1099 aa24.45■■□□□ 1.5
TMED4-201ENST00000289577 ZNF830Q96NB3 372 aaPredicted RBP24.45■■□□□ 1.5
TMED4-201ENST00000289577 HYPKQ9NX55 129 aa24.45■■□□□ 1.5
TMED4-201ENST00000289577 LTKP29376 864 aa24.43■■□□□ 1.5
TMED4-201ENST00000289577 GTF2F1P35269 517 aaKnown RBP eCLIP24.43■■□□□ 1.5
TMED4-201ENST00000289577 TTC41PQ6P2S7 1318 aa24.43■■□□□ 1.5
TMED4-201ENST00000289577 HOXC9P31274 260 aa24.42■■□□□ 1.5
TMED4-201ENST00000289577 HMGN5P82970 282 aaKnown RBP24.42■■□□□ 1.5
TMED4-201ENST00000289577 KCNB2Q92953 911 aa24.42■■□□□ 1.5
TMED4-201ENST00000289577 TTC12Q9H892 705 aaPredicted RBP24.42■■□□□ 1.5
TMED4-201ENST00000289577 HSP90AB4PQ58FF6 505 aa24.42■■□□□ 1.5
TMED4-201ENST00000289577 CWC27Q6UX04 472 aaKnown RBP24.42■■□□□ 1.5
TMED4-201ENST00000289577 LARP6Q9BRS8 491 aaKnown RBP24.42■■□□□ 1.5
TMED4-201ENST00000289577 MTMR6Q9Y217 621 aa24.42■■□□□ 1.5
TMED4-201ENST00000289577 FIBPO43427 364 aa24.41■■□□□ 1.5
TMED4-201ENST00000289577 LARGE1O95461 756 aa24.41■■□□□ 1.5
TMED4-201ENST00000289577 NBPF7P0C2Y1 421 aaPredicted RBP24.41■■□□□ 1.5
TMED4-201ENST00000289577 DNTTIP2Q5QJE6 756 aaKnown RBP24.41■■□□□ 1.5
TMED4-201ENST00000289577 VPS53Q5VIR6 699 aa24.41■■□□□ 1.5
TMED4-201ENST00000289577 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
TMED4-201ENST00000289577 MPNDQ8N594 471 aa24.41■■□□□ 1.5
TMED4-201ENST00000289577 NGDNQ8NEJ9 315 aaKnown RBP24.41■■□□□ 1.5
TMED4-201ENST00000289577 SPG7Q9UQ90 795 aa24.41■■□□□ 1.5
TMED4-201ENST00000289577 GLRX3O76003 335 aaKnown RBP24.41■■□□□ 1.5
TMED4-201ENST00000289577 CASTP20810 708 aaKnown RBP24.41■■□□□ 1.5
TMED4-201ENST00000289577 TM6SF1Q9BZW5 370 aa24.41■■□□□ 1.5
TMED4-201ENST00000289577 BEND3Q5T5X7 828 aa24.4■■□□□ 1.5
TMED4-201ENST00000289577 RGPD8O14715 1765 aaPredicted RBP24.4■■□□□ 1.5
TMED4-201ENST00000289577 ZSCAN31Q96LW9 406 aaPredicted RBP24.39■■□□□ 1.5
TMED4-201ENST00000289577 SH2B1Q9NRF2 756 aaPredicted RBP24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 284.1 ms