RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 CNTNAP4Q9C0A0 1308 aa25.02■■□□□ 1.6
KRTCAP3-201ENST00000288873 GOLGA2Q08379 1002 aa25.01■■□□□ 1.59
KRTCAP3-201ENST00000288873 KRT24Q2M2I5 525 aa25.01■■□□□ 1.59
KRTCAP3-201ENST00000288873 MYH14Q7Z406 1995 aaKnown RBP25.01■■□□□ 1.59
KRTCAP3-201ENST00000288873 CCDC87Q9NVE4 849 aa25■■□□□ 1.59
KRTCAP3-201ENST00000288873 TUBGCP6Q96RT7 1819 aa25■■□□□ 1.59
KRTCAP3-201ENST00000288873 LAMB4A4D0S4 1761 aa24.99■■□□□ 1.59
KRTCAP3-201ENST00000288873 GNPATO15228 680 aa24.99■■□□□ 1.59
KRTCAP3-201ENST00000288873 INTS5Q6P9B9 1019 aaKnown RBP24.99■■□□□ 1.59
KRTCAP3-201ENST00000288873 MYH16Q9H6N6 1097 aa24.99■■□□□ 1.59
KRTCAP3-201ENST00000288873 FANCIQ9NVI1 1328 aa24.99■■□□□ 1.59
KRTCAP3-201ENST00000288873 UBR3Q6ZT12 1888 aa24.98■■□□□ 1.59
KRTCAP3-201ENST00000288873 QSER1Q2KHR3 1735 aa24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 RPS6KA4O75676 772 aa24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 A1BGP04217 495 aa24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 DUSP27Q5VZP5 1158 aa24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 SMIM5Q71RC9 77 aa24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 AMIGO3Q86WK7 504 aa24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 C8orf58Q8NAV2 365 aa24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 ZBTB1Q9Y2K1 713 aa24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 RTCBQ9Y3I0 505 aaKnown RBP24.96■■□□□ 1.59
KRTCAP3-201ENST00000288873 PNPLA7Q6ZV29 1317 aa24.95■■□□□ 1.58
KRTCAP3-201ENST00000288873 E9PSI1 815 aa24.95■■□□□ 1.58
KRTCAP3-201ENST00000288873 ELL2O00472 640 aaPredicted RBP24.95■■□□□ 1.58
KRTCAP3-201ENST00000288873 PHF14O94880 888 aa24.95■■□□□ 1.58
KRTCAP3-201ENST00000288873 CANXP27824 592 aaKnown RBP24.95■■□□□ 1.58
KRTCAP3-201ENST00000288873 CDCA7LQ96GN5 454 aa24.95■■□□□ 1.58
KRTCAP3-201ENST00000288873 EIF2S2P20042 333 aaKnown RBP24.94■■□□□ 1.58
KRTCAP3-201ENST00000288873 SLFN5Q08AF3 891 aa24.94■■□□□ 1.58
KRTCAP3-201ENST00000288873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.93■■□□□ 1.58
KRTCAP3-201ENST00000288873 HOXB7P09629 217 aa24.93■■□□□ 1.58
KRTCAP3-201ENST00000288873 SSFA2P28290 1259 aa24.93■■□□□ 1.58
KRTCAP3-201ENST00000288873 FLAD1Q8NFF5 587 aa24.93■■□□□ 1.58
KRTCAP3-201ENST00000288873 MSH5O43196 834 aa24.92■■□□□ 1.58
KRTCAP3-201ENST00000288873 PIP4K2AP48426 406 aaPredicted RBP24.92■■□□□ 1.58
KRTCAP3-201ENST00000288873 EXOSC9Q06265 439 aaKnown RBP24.92■■□□□ 1.58
KRTCAP3-201ENST00000288873 COL23A1Q86Y22 540 aaPredicted RBP24.92■■□□□ 1.58
KRTCAP3-201ENST00000288873 NECTIN2Q92692 538 aa24.92■■□□□ 1.58
KRTCAP3-201ENST00000288873 SOS1Q07889 1333 aaPredicted RBP24.91■■□□□ 1.58
KRTCAP3-201ENST00000288873 ZBED9Q6R2W3 1325 aa24.91■■□□□ 1.58
KRTCAP3-201ENST00000288873 TRAPPC3LQ5T215 181 aa24.91■■□□□ 1.58
KRTCAP3-201ENST00000288873 TSPYL6Q8N831 410 aa24.91■■□□□ 1.58
KRTCAP3-201ENST00000288873 PDGFDQ9GZP0 370 aaPredicted RBP24.91■■□□□ 1.58
KRTCAP3-201ENST00000288873 NBPF26B4DH59 902 aa24.89■■□□□ 1.58
KRTCAP3-201ENST00000288873 ADRA2BP18089 450 aa24.89■■□□□ 1.58
KRTCAP3-201ENST00000288873 TWISTNBQ3B726 338 aaPredicted RBP24.89■■□□□ 1.58
KRTCAP3-201ENST00000288873 HDGFL1Q5TGJ6 251 aa24.89■■□□□ 1.58
KRTCAP3-201ENST00000288873 NBPF10Q6P3W6 841 aaKnown RBP24.89■■□□□ 1.58
KRTCAP3-201ENST00000288873 NBPF15Q8N660 670 aa24.89■■□□□ 1.58
KRTCAP3-201ENST00000288873 ZNF330Q9Y3S2 320 aaPredicted RBP24.89■■□□□ 1.58
KRTCAP3-201ENST00000288873 CASZ1Q86V15 1759 aa24.89■■□□□ 1.57
KRTCAP3-201ENST00000288873 IL6STP40189 918 aaPredicted RBP24.88■■□□□ 1.57
KRTCAP3-201ENST00000288873 EIF5P55010 431 aaKnown RBP24.88■■□□□ 1.57
KRTCAP3-201ENST00000288873 TRMT2AQ8IZ69 625 aaKnown RBP24.88■■□□□ 1.57
KRTCAP3-201ENST00000288873 ARHGEF1Q92888 912 aaKnown RBP24.88■■□□□ 1.57
KRTCAP3-201ENST00000288873 COL15A1P39059 1388 aa24.87■■□□□ 1.57
KRTCAP3-201ENST00000288873 ERBB4Q15303 1308 aa24.86■■□□□ 1.57
KRTCAP3-201ENST00000288873 MYL6BP14649 208 aa24.86■■□□□ 1.57
KRTCAP3-201ENST00000288873 RFC4P35249 363 aa24.86■■□□□ 1.57
KRTCAP3-201ENST00000288873 NPM2Q86SE8 214 aaKnown RBP24.86■■□□□ 1.57
KRTCAP3-201ENST00000288873 C4AP0C0L4 1744 aa24.85■■□□□ 1.57
KRTCAP3-201ENST00000288873 PDIA6Q15084 440 aa24.84■■□□□ 1.57
KRTCAP3-201ENST00000288873 YTHDC1Q96MU7 727 aaKnown RBP24.84■■□□□ 1.57
KRTCAP3-201ENST00000288873 CHMP4AQ9BY43 222 aa24.84■■□□□ 1.57
KRTCAP3-201ENST00000288873 CHPF2Q9P2E5 772 aa24.84■■□□□ 1.57
KRTCAP3-201ENST00000288873 A0A087WZG4 1122 aa24.83■■□□□ 1.57
KRTCAP3-201ENST00000288873 VAMP4O75379 141 aa24.83■■□□□ 1.57
KRTCAP3-201ENST00000288873 ANXA1P04083 346 aa24.83■■□□□ 1.57
KRTCAP3-201ENST00000288873 PROSER3Q2NL68 480 aa24.83■■□□□ 1.57
KRTCAP3-201ENST00000288873 SLC16A10Q8TF71 515 aa24.83■■□□□ 1.57
KRTCAP3-201ENST00000288873 ARXQ96QS3 562 aa24.83■■□□□ 1.57
KRTCAP3-201ENST00000288873 DDX21Q9NR30 783 aaKnown RBP eCLIP24.83■■□□□ 1.57
KRTCAP3-201ENST00000288873 ZBTB7AO95365 584 aa24.82■■□□□ 1.56
KRTCAP3-201ENST00000288873 CCDC30Q5VVM6 783 aa24.82■■□□□ 1.56
KRTCAP3-201ENST00000288873 DBF4Q9UBU7 674 aaPredicted RBP24.82■■□□□ 1.56
KRTCAP3-201ENST00000288873 SRP68Q9UHB9 627 aaKnown RBP24.81■■□□□ 1.56
KRTCAP3-201ENST00000288873 TBC1D2BQ9UPU7 963 aa24.81■■□□□ 1.56
KRTCAP3-201ENST00000288873 TCERG1O14776 1098 aaKnown RBP24.8■■□□□ 1.56
KRTCAP3-201ENST00000288873 ZPR1O75312 459 aa24.8■■□□□ 1.56
KRTCAP3-201ENST00000288873 NARFQ9UHQ1 456 aa24.8■■□□□ 1.56
KRTCAP3-201ENST00000288873 USP42Q9H9J4 1324 aaKnown RBP24.8■■□□□ 1.56
KRTCAP3-201ENST00000288873 DZIP3Q86Y13 1208 aaKnown RBP24.79■■□□□ 1.56
KRTCAP3-201ENST00000288873 MTFR1LQ9H019 292 aa24.79■■□□□ 1.56
KRTCAP3-201ENST00000288873 ATF5Q9Y2D1 282 aaPredicted RBP24.79■■□□□ 1.56
KRTCAP3-201ENST00000288873 USPL1Q5W0Q7 1092 aa24.78■■□□□ 1.56
KRTCAP3-201ENST00000288873 MSL1Q68DK7 614 aa24.78■■□□□ 1.56
KRTCAP3-201ENST00000288873 LRP10Q7Z4F1 713 aa24.78■■□□□ 1.56
KRTCAP3-201ENST00000288873 GYS1P13807 737 aa24.77■■□□□ 1.56
KRTCAP3-201ENST00000288873 STK31Q9BXU1 1019 aa24.77■■□□□ 1.56
KRTCAP3-201ENST00000288873 SPON1Q9HCB6 807 aa24.77■■□□□ 1.56
KRTCAP3-201ENST00000288873 HYPKQ9NX55 129 aa24.77■■□□□ 1.56
KRTCAP3-201ENST00000288873 TTLL7Q6ZT98 887 aa24.76■■□□□ 1.55
KRTCAP3-201ENST00000288873 CAMTA2O94983 1202 aa24.75■■□□□ 1.55
KRTCAP3-201ENST00000288873 AIMP1Q12904 312 aaKnown RBP24.75■■□□□ 1.55
KRTCAP3-201ENST00000288873 KIF6Q6ZMV9 814 aa24.75■■□□□ 1.55
KRTCAP3-201ENST00000288873 COPS6Q7L5N1 327 aa24.75■■□□□ 1.55
KRTCAP3-201ENST00000288873 XAGE3Q8WTP9 111 aa24.75■■□□□ 1.55
KRTCAP3-201ENST00000288873 SCN7AQ01118 1682 aa24.74■■□□□ 1.55
KRTCAP3-201ENST00000288873 BCORQ6W2J9 1755 aa24.73■■□□□ 1.55
KRTCAP3-201ENST00000288873 SLC4A2P04920 1241 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms