RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 C8orf58Q8NAV2 365 aa16.03■□□□□ 0.16
C9orf3-201ENST00000277198 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
C9orf3-201ENST00000277198 PTMSP20962 102 aa16.02■□□□□ 0.16
C9orf3-201ENST00000277198 PSDA5PKW4 1024 aaPredicted RBP16.02■□□□□ 0.15
C9orf3-201ENST00000277198 EIF4A2Q14240 407 aaKnown RBP16.02■□□□□ 0.15
C9orf3-201ENST00000277198 DCTPP1Q9H773 170 aa16.02■□□□□ 0.15
C9orf3-201ENST00000277198 BCL9O00512 1426 aa16.01■□□□□ 0.15
C9orf3-201ENST00000277198 FSD2A1L4K1 749 aa16.01■□□□□ 0.15
C9orf3-201ENST00000277198 EYA1Q99502 592 aa16.01■□□□□ 0.15
C9orf3-201ENST00000277198 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
C9orf3-201ENST00000277198 CHL1O00533 1208 aa16■□□□□ 0.15
C9orf3-201ENST00000277198 CDC45O75419 566 aa16■□□□□ 0.15
C9orf3-201ENST00000277198 RPAP2Q8IXW5 612 aaPredicted RBP16■□□□□ 0.15
C9orf3-201ENST00000277198 BCL11BQ9C0K0 894 aaPredicted RBP16■□□□□ 0.15
C9orf3-201ENST00000277198 PTPRCP08575 1304 aa16■□□□□ 0.15
C9orf3-201ENST00000277198 TBC1D9Q6ZT07 1266 aa16■□□□□ 0.15
C9orf3-201ENST00000277198 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
C9orf3-201ENST00000277198 GOLGA6L3A6NEY3 463 aa15.99■□□□□ 0.15
C9orf3-201ENST00000277198 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-201ENST00000277198 TRAK2O60296 914 aa15.99■□□□□ 0.15
C9orf3-201ENST00000277198 KIF2CQ99661 725 aa15.99■□□□□ 0.15
C9orf3-201ENST00000277198 ZCRB1Q8TBF4 217 aaKnown RBP15.98■□□□□ 0.15
C9orf3-201ENST00000277198 C1orf115Q9H7X2 142 aa15.98■□□□□ 0.15
C9orf3-201ENST00000277198 NCAPD2Q15021 1401 aa15.98■□□□□ 0.15
C9orf3-201ENST00000277198 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
C9orf3-201ENST00000277198 RAPGEF4Q8WZA2 1011 aa15.98■□□□□ 0.15
C9orf3-201ENST00000277198 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
C9orf3-201ENST00000277198 PROM2Q8N271 834 aa15.97■□□□□ 0.15
C9orf3-201ENST00000277198 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
C9orf3-201ENST00000277198 GBP4Q96PP9 640 aa15.97■□□□□ 0.15
C9orf3-201ENST00000277198 R3HDM1Q15032 1099 aaKnown RBP15.96■□□□□ 0.15
C9orf3-201ENST00000277198 SULT6B1Q6IMI4 303 aa15.96■□□□□ 0.15
C9orf3-201ENST00000277198 DLG5Q8TDM6 1919 aa15.96■□□□□ 0.15
C9orf3-201ENST00000277198 RREB1Q92766 1687 aa15.96■□□□□ 0.15
C9orf3-201ENST00000277198 K7ELQ4 463 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-201ENST00000277198 TATP17735 454 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-201ENST00000277198 RAB3GAP1Q15042 981 aa15.96■□□□□ 0.15
C9orf3-201ENST00000277198 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-201ENST00000277198 PLEKHM2Q8IWE5 1019 aa15.96■□□□□ 0.15
C9orf3-201ENST00000277198 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.14
C9orf3-201ENST00000277198 NHSQ6T4R5 1651 aa15.96■□□□□ 0.14
C9orf3-201ENST00000277198 AEBP1Q8IUX7 1158 aa15.95■□□□□ 0.14
C9orf3-201ENST00000277198 CYP27B1O15528 508 aa15.95■□□□□ 0.14
C9orf3-201ENST00000277198 KAT6BQ8WYB5 2073 aa15.94■□□□□ 0.14
C9orf3-201ENST00000277198 PRIM1P49642 420 aaKnown RBP15.94■□□□□ 0.14
C9orf3-201ENST00000277198 MRE11P49959 708 aa15.94■□□□□ 0.14
C9orf3-201ENST00000277198 SYTL4Q96C24 671 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-201ENST00000277198 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-201ENST00000277198 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
C9orf3-201ENST00000277198 IGSF1Q8N6C5 1336 aa15.93■□□□□ 0.14
C9orf3-201ENST00000277198 PLSCR1O15162 318 aa15.93■□□□□ 0.14
C9orf3-201ENST00000277198 DCTN1Q14203 1278 aa15.93■□□□□ 0.14
C9orf3-201ENST00000277198 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
C9orf3-201ENST00000277198 CLEC17AQ6ZS10 378 aa15.93■□□□□ 0.14
C9orf3-201ENST00000277198 DOT1LQ8TEK3 1739 aa15.93■□□□□ 0.14
C9orf3-201ENST00000277198 RABEP1Q15276 862 aa15.93■□□□□ 0.14
C9orf3-201ENST00000277198 TNPO1Q92973 898 aaKnown RBP15.93■□□□□ 0.14
C9orf3-201ENST00000277198 BTAF1O14981 1849 aa15.92■□□□□ 0.14
C9orf3-201ENST00000277198 XRCC6P12956 609 aaKnown RBP eCLIP15.92■□□□□ 0.14
C9orf3-201ENST00000277198 GSPT1P15170 499 aaKnown RBP15.92■□□□□ 0.14
C9orf3-201ENST00000277198 KCNQ4P56696 695 aa15.91■□□□□ 0.14
C9orf3-201ENST00000277198 CEP85Q6P2H3 762 aa15.91■□□□□ 0.14
C9orf3-201ENST00000277198 CASC1Q6TDU7 716 aa15.91■□□□□ 0.14
C9orf3-201ENST00000277198 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
C9orf3-201ENST00000277198 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
C9orf3-201ENST00000277198 HMMRO75330 724 aa15.91■□□□□ 0.14
C9orf3-201ENST00000277198 HSP90AA1P07900 732 aaKnown RBP15.91■□□□□ 0.14
C9orf3-201ENST00000277198 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
C9orf3-201ENST00000277198 PKD1L3Q7Z443 1732 aa15.9■□□□□ 0.14
C9orf3-201ENST00000277198 HTATSF1O43719 755 aaKnown RBP15.89■□□□□ 0.13
C9orf3-201ENST00000277198 KDRP35968 1356 aa15.89■□□□□ 0.13
C9orf3-201ENST00000277198 CCT4P50991 539 aaKnown RBP15.89■□□□□ 0.13
C9orf3-201ENST00000277198 PDGFDQ9GZP0 370 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-201ENST00000277198 RGPD3A6NKT7 1758 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-201ENST00000277198 RGPD4Q7Z3J3 1758 aa15.89■□□□□ 0.13
C9orf3-201ENST00000277198 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
C9orf3-201ENST00000277198 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-201ENST00000277198 USP26Q9BXU7 913 aa15.88■□□□□ 0.13
C9orf3-201ENST00000277198 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
C9orf3-201ENST00000277198 GOLGA6L22H0YM25 854 aa15.87■□□□□ 0.13
C9orf3-201ENST00000277198 MCM10Q7L590 875 aa15.87■□□□□ 0.13
C9orf3-201ENST00000277198 RTF1Q92541 710 aaKnown RBP15.87■□□□□ 0.13
C9orf3-201ENST00000277198 OSBPL3Q9H4L5 887 aa15.87■□□□□ 0.13
C9orf3-201ENST00000277198 GAS2L2Q8NHY3 880 aa15.87■□□□□ 0.13
C9orf3-201ENST00000277198 REC8O95072 547 aa15.86■□□□□ 0.13
C9orf3-201ENST00000277198 CD2BP2O95400 341 aaKnown RBP15.86■□□□□ 0.13
C9orf3-201ENST00000277198 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
C9orf3-201ENST00000277198 GZF1Q9H116 711 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-201ENST00000277198 PHKG2P15735 406 aa15.86■□□□□ 0.13
C9orf3-201ENST00000277198 SPG7Q9UQ90 795 aa15.86■□□□□ 0.13
C9orf3-201ENST00000277198 NUCB2P80303 420 aa15.85■□□□□ 0.13
C9orf3-201ENST00000277198 MPRIPQ6WCQ1 1025 aa15.85■□□□□ 0.13
C9orf3-201ENST00000277198 GRPEL1Q9HAV7 217 aa15.85■□□□□ 0.13
C9orf3-201ENST00000277198 CWC22Q9HCG8 908 aaKnown RBP15.85■□□□□ 0.13
C9orf3-201ENST00000277198 BABAM1Q9NWV8 329 aa15.85■□□□□ 0.13
C9orf3-201ENST00000277198 KRT24Q2M2I5 525 aa15.84■□□□□ 0.13
C9orf3-201ENST00000277198 NBPF14Q5TI25 921 aa15.84■□□□□ 0.13
C9orf3-201ENST00000277198 MEIS3Q99687 375 aa15.84■□□□□ 0.13
C9orf3-201ENST00000277198 IBTKQ9P2D0 1353 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-201ENST00000277198 SDSP20132 328 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms