RNA–Protein interactions for RNA: ENST00000273582.9

RUBCN-201, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RUBCN, Length 6,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-201ENST00000273582 COL15A1P39059 1388 aa11.84□□□□□ -0.51
RUBCN-201ENST00000273582 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
RUBCN-201ENST00000273582 GPATCH3Q96I76 525 aa11.84□□□□□ -0.51
RUBCN-201ENST00000273582 SHPRHQ149N8 1683 aa11.84□□□□□ -0.51
RUBCN-201ENST00000273582 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.51
RUBCN-201ENST00000273582 USP25Q9UHP3 1055 aa11.83□□□□□ -0.51
RUBCN-201ENST00000273582 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
RUBCN-201ENST00000273582 TMX3Q96JJ7 454 aa11.83□□□□□ -0.52
RUBCN-201ENST00000273582 ELP1O95163 1332 aa11.83□□□□□ -0.52
RUBCN-201ENST00000273582 LTKP29376 864 aa11.83□□□□□ -0.52
RUBCN-201ENST00000273582 RRS1Q15050 365 aaKnown RBP11.83□□□□□ -0.52
RUBCN-201ENST00000273582 ATL3Q6DD88 541 aa11.82□□□□□ -0.52
RUBCN-201ENST00000273582 TMED8Q6PL24 325 aaPredicted RBP11.82□□□□□ -0.52
RUBCN-201ENST00000273582 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
RUBCN-201ENST00000273582 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
RUBCN-201ENST00000273582 DIP2AQ14689 1571 aa11.82□□□□□ -0.52
RUBCN-201ENST00000273582 ARHGEF28Q8N1W1 1705 aaKnown RBP11.82□□□□□ -0.52
RUBCN-201ENST00000273582 SSFA2P28290 1259 aa11.82□□□□□ -0.52
RUBCN-201ENST00000273582 SURF6O75683 361 aaKnown RBP11.81□□□□□ -0.52
RUBCN-201ENST00000273582 AKAP4Q5JQC9 854 aa11.81□□□□□ -0.52
RUBCN-201ENST00000273582 COPRSQ9NQ92 184 aa11.81□□□□□ -0.52
RUBCN-201ENST00000273582 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
RUBCN-201ENST00000273582 OS9Q13438 667 aaPredicted RBP11.81□□□□□ -0.52
RUBCN-201ENST00000273582 GAS2L3Q86XJ1 694 aa11.81□□□□□ -0.52
RUBCN-201ENST00000273582 TUBB4AP04350 444 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 PSMA5P28066 241 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 CCDC39Q9UFE4 941 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 IL17REQ8NFR9 667 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 LRRFIP1Q32MZ4 808 aaKnown RBP11.8□□□□□ -0.52
RUBCN-201ENST00000273582 FAM83GA6ND36 823 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 MCM10Q7L590 875 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 CNTROBQ8N137 903 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
RUBCN-201ENST00000273582 IGSF3O75054 1194 aa11.79□□□□□ -0.52
RUBCN-201ENST00000273582 ANKLE2Q86XL3 938 aa11.79□□□□□ -0.52
RUBCN-201ENST00000273582 DIAPH3Q9NSV4 1193 aa11.79□□□□□ -0.52
RUBCN-201ENST00000273582 HYPKQ9NX55 129 aa11.79□□□□□ -0.52
RUBCN-201ENST00000273582 PRIMPOLQ96LW4 560 aa11.79□□□□□ -0.52
RUBCN-201ENST00000273582 HOXC9P31274 260 aa11.79□□□□□ -0.52
RUBCN-201ENST00000273582 BEND3Q5T5X7 828 aa11.79□□□□□ -0.52
RUBCN-201ENST00000273582 EXOC6BQ9Y2D4 811 aa11.78□□□□□ -0.52
RUBCN-201ENST00000273582 EIF4A1P60842 406 aaKnown RBP11.78□□□□□ -0.52
RUBCN-201ENST00000273582 LARP1Q6PKG0 1096 aaKnown RBP11.78□□□□□ -0.52
RUBCN-201ENST00000273582 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
RUBCN-201ENST00000273582 UBE2HP62256 183 aa11.78□□□□□ -0.52
RUBCN-201ENST00000273582 SLC26A8Q96RN1 970 aa11.78□□□□□ -0.52
RUBCN-201ENST00000273582 ZDHHC9Q9Y397 364 aa11.78□□□□□ -0.52
RUBCN-201ENST00000273582 ARHGEF25Q86VW2 580 aa11.77□□□□□ -0.52
RUBCN-201ENST00000273582 RRAGDQ9NQL2 400 aaPredicted RBP11.77□□□□□ -0.52
RUBCN-201ENST00000273582 DIP2BQ9P265 1576 aa11.77□□□□□ -0.53
RUBCN-201ENST00000273582 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
RUBCN-201ENST00000273582 EVI5LQ96CN4 794 aa11.77□□□□□ -0.53
RUBCN-201ENST00000273582 MST1RQ04912 1400 aa11.77□□□□□ -0.53
RUBCN-201ENST00000273582 PDCL3Q9H2J4 239 aa11.77□□□□□ -0.53
RUBCN-201ENST00000273582 QRICH2Q9H0J4 1663 aa11.77□□□□□ -0.53
RUBCN-201ENST00000273582 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.53
RUBCN-201ENST00000273582 NOC3LQ8WTT2 800 aaKnown RBP11.77□□□□□ -0.53
RUBCN-201ENST00000273582 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
RUBCN-201ENST00000273582 UTYO14607 1347 aa11.77□□□□□ -0.53
RUBCN-201ENST00000273582 KCNA6P17658 529 aa11.76□□□□□ -0.53
RUBCN-201ENST00000273582 VPS53Q5VIR6 699 aa11.76□□□□□ -0.53
RUBCN-201ENST00000273582 ZNF530Q6P9A1 599 aaPredicted RBP11.76□□□□□ -0.53
RUBCN-201ENST00000273582 DDX19AQ9NUU7 478 aaKnown RBP11.76□□□□□ -0.53
RUBCN-201ENST00000273582 PANK2Q9BZ23 570 aa11.76□□□□□ -0.53
RUBCN-201ENST00000273582 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
RUBCN-201ENST00000273582 MTA3Q9BTC8 594 aa11.76□□□□□ -0.53
RUBCN-201ENST00000273582 KRT85P78386 507 aa11.75□□□□□ -0.53
RUBCN-201ENST00000273582 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
RUBCN-201ENST00000273582 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
RUBCN-201ENST00000273582 SLC4A10Q6U841 1118 aa11.75□□□□□ -0.53
RUBCN-201ENST00000273582 MLECQ14165 292 aa11.75□□□□□ -0.53
RUBCN-201ENST00000273582 CYP46A1Q9Y6A2 500 aa11.75□□□□□ -0.53
RUBCN-201ENST00000273582 TRIM28Q13263 835 aaKnown RBP11.75□□□□□ -0.53
RUBCN-201ENST00000273582 CREBRFQ8IUR6 639 aa11.75□□□□□ -0.53
RUBCN-201ENST00000273582 NEMFO60524 1076 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
RUBCN-201ENST00000273582 DCTN1Q14203 1278 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 USPL1Q5W0Q7 1092 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 TTC14Q96N46 770 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 NT5C2P49902 561 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 NOL10Q9BSC4 688 aaKnown RBP11.74□□□□□ -0.53
RUBCN-201ENST00000273582 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 CAVIN1Q6NZI2 390 aaKnown RBP11.74□□□□□ -0.53
RUBCN-201ENST00000273582 SMC3Q9UQE7 1217 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 MROH2AA6NES4 1674 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 SYT1P21579 422 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 GOLGA6L1Q8N7Z2 621 aa11.74□□□□□ -0.53
RUBCN-201ENST00000273582 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
RUBCN-201ENST00000273582 PREX1Q8TCU6 1659 aa11.73□□□□□ -0.53
RUBCN-201ENST00000273582 CCDC183Q5T5S1 534 aa11.73□□□□□ -0.53
RUBCN-201ENST00000273582 G3BP1Q13283 466 aaKnown RBP eCLIP11.73□□□□□ -0.53
RUBCN-201ENST00000273582 DYNC1I1O14576 645 aa11.73□□□□□ -0.53
RUBCN-201ENST00000273582 PRPF40AO75400 957 aaKnown RBP11.73□□□□□ -0.53
RUBCN-201ENST00000273582 G2E3Q7L622 706 aa11.73□□□□□ -0.53
RUBCN-201ENST00000273582 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
RUBCN-201ENST00000273582 KIF2AO00139 706 aaPredicted RBP11.73□□□□□ -0.53
RUBCN-201ENST00000273582 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms