RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SNX14Q9Y5W7 946 aa33.16■■■□□ 2.9
CBX4-201ENST00000269397 HCLS1P14317 486 aaPredicted RBP33.15■■■□□ 2.9
CBX4-201ENST00000269397 TSPOAP1O95153 1857 aa33.15■■■□□ 2.9
CBX4-201ENST00000269397 C17orf53Q8N3J3 647 aaPredicted RBP33.15■■■□□ 2.9
CBX4-201ENST00000269397 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.15■■■□□ 2.9
CBX4-201ENST00000269397 AK2P54819 239 aa33.15■■■□□ 2.9
CBX4-201ENST00000269397 FLT4P35916 1363 aa33.14■■■□□ 2.9
CBX4-201ENST00000269397 GNAT3A8MTJ3 354 aa33.14■■■□□ 2.9
CBX4-201ENST00000269397 HDGFP51858 240 aaKnown RBP33.14■■■□□ 2.9
CBX4-201ENST00000269397 SPG7Q9UQ90 795 aa33.14■■■□□ 2.9
CBX4-201ENST00000269397 NUTM2GQ5VZR2 741 aa33.13■■■□□ 2.89
CBX4-201ENST00000269397 IL17REQ8NFR9 667 aa33.13■■■□□ 2.89
CBX4-201ENST00000269397 PI4K2BQ8TCG2 481 aa33.13■■■□□ 2.89
CBX4-201ENST00000269397 TTC12Q9H892 705 aaPredicted RBP33.13■■■□□ 2.89
CBX4-201ENST00000269397 DYNC1I1O14576 645 aa33.13■■■□□ 2.89
CBX4-201ENST00000269397 FIBPO43427 364 aa33.13■■■□□ 2.89
CBX4-201ENST00000269397 CWC27Q6UX04 472 aaKnown RBP33.13■■■□□ 2.89
CBX4-201ENST00000269397 SSH3Q8TE77 659 aa33.13■■■□□ 2.89
CBX4-201ENST00000269397 IL17RAQ96F46 866 aa33.13■■■□□ 2.89
CBX4-201ENST00000269397 LTV1Q96GA3 475 aaPredicted RBP33.13■■■□□ 2.89
CBX4-201ENST00000269397 KDRP35968 1356 aa33.13■■■□□ 2.89
CBX4-201ENST00000269397 IGSF1Q8N6C5 1336 aa33.12■■■□□ 2.89
CBX4-201ENST00000269397 XRN1Q8IZH2 1706 aaKnown RBP33.12■■■□□ 2.89
CBX4-201ENST00000269397 SGSM2O43147 1006 aa33.12■■■□□ 2.89
CBX4-201ENST00000269397 RHPN1Q8TCX5 695 aa33.12■■■□□ 2.89
CBX4-201ENST00000269397 RAD50Q92878 1312 aa33.11■■■□□ 2.89
CBX4-201ENST00000269397 SBNO1A3KN83 1393 aa33.11■■■□□ 2.89
CBX4-201ENST00000269397 ZSCAN22P10073 491 aaPredicted RBP33.11■■■□□ 2.89
CBX4-201ENST00000269397 SYT1P21579 422 aa33.11■■■□□ 2.89
CBX4-201ENST00000269397 CCDC183Q5T5S1 534 aa33.11■■■□□ 2.89
CBX4-201ENST00000269397 RUFY3Q7L099 469 aa33.11■■■□□ 2.89
CBX4-201ENST00000269397 SLC26A8Q96RN1 970 aa33.11■■■□□ 2.89
CBX4-201ENST00000269397 ADCY5O95622 1261 aa33.11■■■□□ 2.89
CBX4-201ENST00000269397 PLCB2Q00722 1185 aa33.11■■■□□ 2.89
CBX4-201ENST00000269397 SRGAP3O43295 1099 aa33.1■■■□□ 2.89
CBX4-201ENST00000269397 AGLP35573 1532 aa33.1■■■□□ 2.89
CBX4-201ENST00000269397 NALCNQ8IZF0 1738 aa33.1■■■□□ 2.89
CBX4-201ENST00000269397 HDGFL1Q5TGJ6 251 aa33.1■■■□□ 2.89
CBX4-201ENST00000269397 STX6O43752 255 aa33.09■■■□□ 2.89
CBX4-201ENST00000269397 PLEKHG5O94827 1062 aa33.09■■■□□ 2.89
CBX4-201ENST00000269397 TSC1Q92574 1164 aa33.09■■■□□ 2.89
CBX4-201ENST00000269397 TTC14Q96N46 770 aa33.09■■■□□ 2.89
CBX4-201ENST00000269397 EIF2S2P20042 333 aaKnown RBP33.09■■■□□ 2.89
CBX4-201ENST00000269397 NGDNQ8NEJ9 315 aaKnown RBP33.09■■■□□ 2.89
CBX4-201ENST00000269397 LSG1Q9H089 658 aaKnown RBP33.09■■■□□ 2.89
CBX4-201ENST00000269397 LARGE1O95461 756 aa33.08■■■□□ 2.89
CBX4-201ENST00000269397 AOX1Q06278 1338 aa33.08■■■□□ 2.89
CBX4-201ENST00000269397 NBPF7P0C2Y1 421 aaPredicted RBP33.08■■■□□ 2.89
CBX4-201ENST00000269397 MAP7D2Q96T17 732 aa33.08■■■□□ 2.89
CBX4-201ENST00000269397 FAM208AQ9UK61 1670 aaKnown RBP33.07■■■□□ 2.89
CBX4-201ENST00000269397 FAM184AQ8NB25 1140 aa33.06■■■□□ 2.88
CBX4-201ENST00000269397 TMEM87AQ8NBN3 555 aa33.06■■■□□ 2.88
CBX4-201ENST00000269397 DDX54Q8TDD1 881 aaKnown RBP33.06■■■□□ 2.88
CBX4-201ENST00000269397 LIMCH1Q9UPQ0 1083 aa33.06■■■□□ 2.88
CBX4-201ENST00000269397 SMC3Q9UQE7 1217 aa33.06■■■□□ 2.88
CBX4-201ENST00000269397 CASTP20810 708 aaKnown RBP33.05■■■□□ 2.88
CBX4-201ENST00000269397 GIMAP6Q6P9H5 292 aa33.05■■■□□ 2.88
CBX4-201ENST00000269397 FMN2Q9NZ56 1722 aa33.05■■■□□ 2.88
CBX4-201ENST00000269397 TAF7Q15545 349 aaPredicted RBP33.05■■■□□ 2.88
CBX4-201ENST00000269397 USHBP1Q8N6Y0 703 aa33.05■■■□□ 2.88
CBX4-201ENST00000269397 ADAMTS13Q76LX8 1427 aa33.04■■■□□ 2.88
CBX4-201ENST00000269397 TMEM2Q9UHN6 1383 aa33.04■■■□□ 2.88
CBX4-201ENST00000269397 LTKP29376 864 aa33.04■■■□□ 2.88
CBX4-201ENST00000269397 F13A1P00488 732 aa33.04■■■□□ 2.88
CBX4-201ENST00000269397 UBE2HP62256 183 aa33.04■■■□□ 2.88
CBX4-201ENST00000269397 UVSSAQ2YD98 709 aa33.04■■■□□ 2.88
CBX4-201ENST00000269397 CCDC83Q8IWF9 413 aa33.04■■■□□ 2.88
CBX4-201ENST00000269397 CNTROBQ8N137 903 aa33.04■■■□□ 2.88
CBX4-201ENST00000269397 RAB11FIP3O75154 756 aa33.03■■■□□ 2.88
CBX4-201ENST00000269397 NOLC1Q14978 699 aaKnown RBP eCLIP33.03■■■□□ 2.88
CBX4-201ENST00000269397 TOPAZ1Q8N9V7 1692 aa33.03■■■□□ 2.88
CBX4-201ENST00000269397 NLRP6P59044 892 aa33.03■■■□□ 2.88
CBX4-201ENST00000269397 POLA2Q14181 598 aa33.03■■■□□ 2.88
CBX4-201ENST00000269397 KIF1BPQ96EK5 621 aa33.02■■■□□ 2.88
CBX4-201ENST00000269397 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.02■■■□□ 2.88
CBX4-201ENST00000269397 HTATSF1O43719 755 aaKnown RBP33.01■■■□□ 2.88
CBX4-201ENST00000269397 DNM1Q05193 864 aaKnown RBP33.01■■■□□ 2.88
CBX4-201ENST00000269397 PIBF1Q8WXW3 757 aa33.01■■■□□ 2.88
CBX4-201ENST00000269397 ANXA1P04083 346 aa33.01■■■□□ 2.87
CBX4-201ENST00000269397 TTC21AQ8NDW8 1320 aa33■■■□□ 2.87
CBX4-201ENST00000269397 ADCK5Q3MIX3 580 aa33■■■□□ 2.87
CBX4-201ENST00000269397 FAM177BA6PVY3 158 aa32.99■■■□□ 2.87
CBX4-201ENST00000269397 GJB2P29033 226 aa32.99■■■□□ 2.87
CBX4-201ENST00000269397 PTH1RQ03431 593 aa32.99■■■□□ 2.87
CBX4-201ENST00000269397 MAP3K5Q99683 1374 aa32.98■■■□□ 2.87
CBX4-201ENST00000269397 OS9Q13438 667 aaPredicted RBP32.98■■■□□ 2.87
CBX4-201ENST00000269397 TNRQ92752 1358 aa32.98■■■□□ 2.87
CBX4-201ENST00000269397 EPB41L2O43491 1005 aaKnown RBP32.98■■■□□ 2.87
CBX4-201ENST00000269397 MYRIPQ8NFW9 859 aa32.97■■■□□ 2.87
CBX4-201ENST00000269397 HYPKQ9NX55 129 aa32.97■■■□□ 2.87
CBX4-201ENST00000269397 JAKMIP1Q96N16 626 aaKnown RBP32.97■■■□□ 2.87
CBX4-201ENST00000269397 AP5Z1O43299 807 aa32.96■■■□□ 2.87
CBX4-201ENST00000269397 KDM4AO75164 1064 aa32.96■■■□□ 2.87
CBX4-201ENST00000269397 HOXC9P31274 260 aa32.96■■■□□ 2.87
CBX4-201ENST00000269397 PRPF40BQ6NWY9 871 aaKnown RBP32.96■■■□□ 2.87
CBX4-201ENST00000269397 PI4KAP2A4QPH2 592 aa32.96■■■□□ 2.87
CBX4-201ENST00000269397 PI4KAP1Q8N8J0 262 aa32.96■■■□□ 2.87
CBX4-201ENST00000269397 DIAPH3Q9NSV4 1193 aa32.96■■■□□ 2.87
CBX4-201ENST00000269397 VPS37CA5D8V6 355 aaPredicted RBP32.95■■■□□ 2.87
CBX4-201ENST00000269397 CHPF2Q9P2E5 772 aa32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms