RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 MPNDQ8N594 471 aa26.87■■□□□ 1.89
CDR2-201ENST00000268383 RBM33Q96EV2 1170 aaKnown RBP26.87■■□□□ 1.89
CDR2-201ENST00000268383 MAP3K5Q99683 1374 aa26.87■■□□□ 1.89
CDR2-201ENST00000268383 SRGAP3O43295 1099 aa26.87■■□□□ 1.89
CDR2-201ENST00000268383 CPA1P15085 419 aa26.87■■□□□ 1.89
CDR2-201ENST00000268383 LGR6Q9HBX8 967 aa26.87■■□□□ 1.89
CDR2-201ENST00000268383 MCM2P49736 904 aa26.86■■□□□ 1.89
CDR2-201ENST00000268383 SSH3Q8TE77 659 aa26.86■■□□□ 1.89
CDR2-201ENST00000268383 ANAPC15P60006 121 aa26.85■■□□□ 1.89
CDR2-201ENST00000268383 RHPN1Q8TCX5 695 aa26.85■■□□□ 1.89
CDR2-201ENST00000268383 PI4K2BQ8TCG2 481 aa26.84■■□□□ 1.89
CDR2-201ENST00000268383 SPG7Q9UQ90 795 aa26.84■■□□□ 1.89
CDR2-201ENST00000268383 HTATSF1O43719 755 aaKnown RBP26.84■■□□□ 1.89
CDR2-201ENST00000268383 RASEFQ8IZ41 740 aa26.84■■□□□ 1.89
CDR2-201ENST00000268383 SRCIN1Q9C0H9 1055 aa26.84■■□□□ 1.89
CDR2-201ENST00000268383 CHPF2Q9P2E5 772 aa26.84■■□□□ 1.89
CDR2-201ENST00000268383 OFD1O75665 1012 aa26.83■■□□□ 1.89
CDR2-201ENST00000268383 HSPA4P34932 840 aa26.83■■□□□ 1.89
CDR2-201ENST00000268383 CWC27Q6UX04 472 aaKnown RBP26.83■■□□□ 1.89
CDR2-201ENST00000268383 USP48Q86UV5 1035 aa26.83■■□□□ 1.89
CDR2-201ENST00000268383 PI4KAP2A4QPH2 592 aa26.82■■□□□ 1.88
CDR2-201ENST00000268383 PI4KAP1Q8N8J0 262 aa26.82■■□□□ 1.88
CDR2-201ENST00000268383 NOL7Q9UMY1 257 aaKnown RBP26.82■■□□□ 1.88
CDR2-201ENST00000268383 R3HCC1Q9Y3T6 440 aaKnown RBP26.82■■□□□ 1.88
CDR2-201ENST00000268383 DIP2AQ14689 1571 aa26.82■■□□□ 1.88
CDR2-201ENST00000268383 INTS4Q96HW7 963 aaKnown RBP26.81■■□□□ 1.88
CDR2-201ENST00000268383 NWD1Q149M9 1564 aa26.81■■□□□ 1.88
CDR2-201ENST00000268383 MBD3O95983 291 aa26.81■■□□□ 1.88
CDR2-201ENST00000268383 DDX54Q8TDD1 881 aaKnown RBP26.81■■□□□ 1.88
CDR2-201ENST00000268383 SNX14Q9Y5W7 946 aa26.8■■□□□ 1.88
CDR2-201ENST00000268383 LRRC37A3O60309 1634 aa26.8■■□□□ 1.88
CDR2-201ENST00000268383 KCNA6P17658 529 aa26.79■■□□□ 1.88
CDR2-201ENST00000268383 SGSM2O43147 1006 aa26.78■■□□□ 1.88
CDR2-201ENST00000268383 CNPY2Q9Y2B0 182 aa26.78■■□□□ 1.88
CDR2-201ENST00000268383 AK2P54819 239 aa26.78■■□□□ 1.88
CDR2-201ENST00000268383 POLA2Q14181 598 aa26.78■■□□□ 1.88
CDR2-201ENST00000268383 RBM10P98175 930 aaKnown RBP26.77■■□□□ 1.88
CDR2-201ENST00000268383 NBPF6Q5VWK0 638 aa26.77■■□□□ 1.88
CDR2-201ENST00000268383 NBPF4Q96M43 638 aa26.77■■□□□ 1.88
CDR2-201ENST00000268383 RPAP1Q9BWH6 1393 aaPredicted RBP26.77■■□□□ 1.88
CDR2-201ENST00000268383 TSPY26PQ9H489 355 aa26.77■■□□□ 1.88
CDR2-201ENST00000268383 LSG1Q9H089 658 aaKnown RBP26.76■■□□□ 1.87
CDR2-201ENST00000268383 CACNA1FO60840 1977 aa26.76■■□□□ 1.87
CDR2-201ENST00000268383 RRP9O43818 475 aaKnown RBP26.76■■□□□ 1.87
CDR2-201ENST00000268383 LARGE1O95461 756 aa26.76■■□□□ 1.87
CDR2-201ENST00000268383 RAD50Q92878 1312 aa26.76■■□□□ 1.87
CDR2-201ENST00000268383 EIF4A1P60842 406 aaKnown RBP26.75■■□□□ 1.87
CDR2-201ENST00000268383 OS9Q13438 667 aaPredicted RBP26.75■■□□□ 1.87
CDR2-201ENST00000268383 TBX22Q9Y458 520 aa26.75■■□□□ 1.87
CDR2-201ENST00000268383 BEND3Q5T5X7 828 aa26.75■■□□□ 1.87
CDR2-201ENST00000268383 RUFY3Q7L099 469 aa26.75■■□□□ 1.87
CDR2-201ENST00000268383 LRRC59Q96AG4 307 aaKnown RBP26.75■■□□□ 1.87
CDR2-201ENST00000268383 ZKSCAN5Q9Y2L8 839 aa26.75■■□□□ 1.87
CDR2-201ENST00000268383 TPM2P07951 284 aa26.74■■□□□ 1.87
CDR2-201ENST00000268383 DNAAF4Q8WXU2 420 aa26.74■■□□□ 1.87
CDR2-201ENST00000268383 KIF1BPQ96EK5 621 aa26.74■■□□□ 1.87
CDR2-201ENST00000268383 PA2G4Q9UQ80 394 aaKnown RBP26.74■■□□□ 1.87
CDR2-201ENST00000268383 MPRIPQ6WCQ1 1025 aa26.74■■□□□ 1.87
CDR2-201ENST00000268383 RAB11FIP3O75154 756 aa26.74■■□□□ 1.87
CDR2-201ENST00000268383 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.74■■□□□ 1.87
CDR2-201ENST00000268383 WDR33Q9C0J8 1336 aaKnown RBP26.73■■□□□ 1.87
CDR2-201ENST00000268383 HS1BP3Q53T59 392 aa26.73■■□□□ 1.87
CDR2-201ENST00000268383 AOX1Q06278 1338 aa26.73■■□□□ 1.87
CDR2-201ENST00000268383 TTC14Q96N46 770 aa26.73■■□□□ 1.87
CDR2-201ENST00000268383 PTH1RQ03431 593 aa26.72■■□□□ 1.87
CDR2-201ENST00000268383 CNTROBQ8N137 903 aa26.72■■□□□ 1.87
CDR2-201ENST00000268383 CASTP20810 708 aaKnown RBP26.72■■□□□ 1.87
CDR2-201ENST00000268383 KIF13AQ9H1H9 1805 aa26.71■■□□□ 1.87
CDR2-201ENST00000268383 PRAMEF22A3QJZ6 481 aa26.71■■□□□ 1.87
CDR2-201ENST00000268383 ADCK5Q3MIX3 580 aa26.71■■□□□ 1.87
CDR2-201ENST00000268383 ZNF500O60304 480 aaPredicted RBP26.71■■□□□ 1.87
CDR2-201ENST00000268383 ZNF830Q96NB3 372 aaPredicted RBP26.71■■□□□ 1.87
CDR2-201ENST00000268383 MARF1Q9Y4F3 1742 aaKnown RBP26.71■■□□□ 1.87
CDR2-201ENST00000268383 PTMAP06454 111 aaKnown RBP26.7■■□□□ 1.87
CDR2-201ENST00000268383 SYT1P21579 422 aa26.7■■□□□ 1.87
CDR2-201ENST00000268383 COL9A3Q14050 684 aaPredicted RBP26.7■■□□□ 1.87
CDR2-201ENST00000268383 PROSER3Q2NL68 480 aa26.7■■□□□ 1.87
CDR2-201ENST00000268383 FIBPO43427 364 aa26.7■■□□□ 1.86
CDR2-201ENST00000268383 IL17RAQ96F46 866 aa26.7■■□□□ 1.86
CDR2-201ENST00000268383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.69■■□□□ 1.86
CDR2-201ENST00000268383 PXDNLA1KZ92 1463 aa26.69■■□□□ 1.86
CDR2-201ENST00000268383 CWF19L2Q2TBE0 894 aaKnown RBP26.68■■□□□ 1.86
CDR2-201ENST00000268383 CCDC83Q8IWF9 413 aa26.68■■□□□ 1.86
CDR2-201ENST00000268383 ADCY9O60503 1353 aa26.68■■□□□ 1.86
CDR2-201ENST00000268383 BTBD11A6QL63 1104 aa26.67■■□□□ 1.86
CDR2-201ENST00000268383 PRPF40BQ6NWY9 871 aaKnown RBP26.67■■□□□ 1.86
CDR2-201ENST00000268383 CCDC39Q9UFE4 941 aa26.67■■□□□ 1.86
CDR2-201ENST00000268383 ZSCAN22P10073 491 aaPredicted RBP26.67■■□□□ 1.86
CDR2-201ENST00000268383 SYAP1Q96A49 352 aaPredicted RBP26.67■■□□□ 1.86
CDR2-201ENST00000268383 USP25Q9UHP3 1055 aa26.67■■□□□ 1.86
CDR2-201ENST00000268383 STX6O43752 255 aa26.67■■□□□ 1.86
CDR2-201ENST00000268383 LIMCH1Q9UPQ0 1083 aa26.67■■□□□ 1.86
CDR2-201ENST00000268383 CEMIPQ8WUJ3 1361 aa26.66■■□□□ 1.86
CDR2-201ENST00000268383 TEFQ10587 303 aa26.66■■□□□ 1.86
CDR2-201ENST00000268383 DIAPH3Q9NSV4 1193 aa26.66■■□□□ 1.86
CDR2-201ENST00000268383 JAKMIP1Q96N16 626 aaKnown RBP26.66■■□□□ 1.86
CDR2-201ENST00000268383 SMC3Q9UQE7 1217 aa26.66■■□□□ 1.86
CDR2-201ENST00000268383 HCLS1P14317 486 aaPredicted RBP26.65■■□□□ 1.86
CDR2-201ENST00000268383 ZNF530Q6P9A1 599 aaPredicted RBP26.65■■□□□ 1.86
CDR2-201ENST00000268383 VSIG10Q8N0Z9 540 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 315.4 ms