RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 RRP9O43818 475 aaKnown RBP17.94■□□□□ 0.46
FOXF1-201ENST00000262426 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
FOXF1-201ENST00000262426 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
FOXF1-201ENST00000262426 GCC1Q96CN9 775 aa17.94■□□□□ 0.46
FOXF1-201ENST00000262426 BABAM1Q9NWV8 329 aa17.94■□□□□ 0.46
FOXF1-201ENST00000262426 NCAPD2Q15021 1401 aa17.94■□□□□ 0.46
FOXF1-201ENST00000262426 COL18A1P39060 1754 aa17.94■□□□□ 0.46
FOXF1-201ENST00000262426 ATP10DQ9P241 1426 aa17.94■□□□□ 0.46
FOXF1-201ENST00000262426 A0A0G2JS52 829 aa17.93■□□□□ 0.46
FOXF1-201ENST00000262426 MAP3K2Q9Y2U5 619 aa17.93■□□□□ 0.46
FOXF1-201ENST00000262426 GNAI2P04899 355 aa17.93■□□□□ 0.46
FOXF1-201ENST00000262426 DCTPP1Q9H773 170 aa17.93■□□□□ 0.46
FOXF1-201ENST00000262426 CPDO75976 1380 aa17.93■□□□□ 0.46
FOXF1-201ENST00000262426 XRCC6P12956 609 aaKnown RBP eCLIP17.93■□□□□ 0.46
FOXF1-201ENST00000262426 TTC5Q8N0Z6 440 aa17.92■□□□□ 0.46
FOXF1-201ENST00000262426 DBF4Q9UBU7 674 aaPredicted RBP17.92■□□□□ 0.46
FOXF1-201ENST00000262426 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
FOXF1-201ENST00000262426 SRCIN1Q9C0H9 1055 aa17.92■□□□□ 0.46
FOXF1-201ENST00000262426 RPAP2Q8IXW5 612 aaPredicted RBP17.91■□□□□ 0.46
FOXF1-201ENST00000262426 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
FOXF1-201ENST00000262426 UBTFL1P0CB47 393 aaPredicted RBP17.91■□□□□ 0.46
FOXF1-201ENST00000262426 IL2RBP14784 551 aa17.9■□□□□ 0.46
FOXF1-201ENST00000262426 COL5A2P05997 1499 aaPredicted RBP17.89■□□□□ 0.45
FOXF1-201ENST00000262426 LMO7Q8WWI1 1683 aa17.89■□□□□ 0.45
FOXF1-201ENST00000262426 GOLGA6L3A6NEY3 463 aa17.89■□□□□ 0.45
FOXF1-201ENST00000262426 ZNF330Q9Y3S2 320 aaPredicted RBP17.89■□□□□ 0.45
FOXF1-201ENST00000262426 FAM208AQ9UK61 1670 aaKnown RBP17.89■□□□□ 0.45
FOXF1-201ENST00000262426 ADCY9O60503 1353 aa17.88■□□□□ 0.45
FOXF1-201ENST00000262426 PDIA6Q15084 440 aa17.88■□□□□ 0.45
FOXF1-201ENST00000262426 BEND3Q5T5X7 828 aa17.88■□□□□ 0.45
FOXF1-201ENST00000262426 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
FOXF1-201ENST00000262426 COPS6Q7L5N1 327 aa17.88■□□□□ 0.45
FOXF1-201ENST00000262426 PLEKHM2Q8IWE5 1019 aa17.88■□□□□ 0.45
FOXF1-201ENST00000262426 XAGE3Q8WTP9 111 aa17.87■□□□□ 0.45
FOXF1-201ENST00000262426 VIRMAQ69YN4 1812 aaKnown RBP17.87■□□□□ 0.45
FOXF1-201ENST00000262426 GNAI3P08754 354 aa17.87■□□□□ 0.45
FOXF1-201ENST00000262426 SYTL4Q96C24 671 aaPredicted RBP17.87■□□□□ 0.45
FOXF1-201ENST00000262426 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
FOXF1-201ENST00000262426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
FOXF1-201ENST00000262426 GSPT1P15170 499 aaKnown RBP17.86■□□□□ 0.45
FOXF1-201ENST00000262426 L1TD1Q5T7N2 865 aaKnown RBP17.86■□□□□ 0.45
FOXF1-201ENST00000262426 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
FOXF1-201ENST00000262426 PPP1R42Q7Z4L9 355 aa17.86■□□□□ 0.45
FOXF1-201ENST00000262426 RIC3Q7Z5B4 369 aa17.86■□□□□ 0.45
FOXF1-201ENST00000262426 C9orf78Q9NZ63 289 aaPredicted RBP17.86■□□□□ 0.45
FOXF1-201ENST00000262426 CRYBG1Q9Y4K1 1723 aa17.85■□□□□ 0.45
FOXF1-201ENST00000262426 HOXB7P09629 217 aa17.85■□□□□ 0.45
FOXF1-201ENST00000262426 ATP5J2-PTCD1G3V325 749 aa17.85■□□□□ 0.45
FOXF1-201ENST00000262426 SRGAP3O43295 1099 aa17.85■□□□□ 0.45
FOXF1-201ENST00000262426 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
FOXF1-201ENST00000262426 A1BGP04217 495 aa17.84■□□□□ 0.45
FOXF1-201ENST00000262426 DDX21Q9NR30 783 aaKnown RBP eCLIP17.84■□□□□ 0.45
FOXF1-201ENST00000262426 HMMRO75330 724 aa17.84■□□□□ 0.45
FOXF1-201ENST00000262426 ZHX1Q9UKY1 873 aaPredicted RBP17.84■□□□□ 0.45
FOXF1-201ENST00000262426 ATP8B2P98198 1209 aa17.84■□□□□ 0.45
FOXF1-201ENST00000262426 KSR2Q6VAB6 950 aa17.84■□□□□ 0.45
FOXF1-201ENST00000262426 FMNL2Q96PY5 1086 aa17.84■□□□□ 0.45
FOXF1-201ENST00000262426 PCDH11XQ9BZA7 1347 aa17.83■□□□□ 0.45
FOXF1-201ENST00000262426 PCDH11YQ9BZA8 1340 aa17.83■□□□□ 0.45
FOXF1-201ENST00000262426 SURF6O75683 361 aaKnown RBP17.83■□□□□ 0.45
FOXF1-201ENST00000262426 SNRPA1P09661 255 aaKnown RBP17.83■□□□□ 0.45
FOXF1-201ENST00000262426 UPF2Q9HAU5 1272 aaKnown RBP17.83■□□□□ 0.45
FOXF1-201ENST00000262426 HEG1Q9ULI3 1381 aa17.83■□□□□ 0.44
FOXF1-201ENST00000262426 OVOS2A0A0G2JMS6 1433 aa17.83■□□□□ 0.44
FOXF1-201ENST00000262426 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.44
FOXF1-201ENST00000262426 MYD88Q99836 296 aa17.82■□□□□ 0.44
FOXF1-201ENST00000262426 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
FOXF1-201ENST00000262426 PA2G4Q9UQ80 394 aaKnown RBP17.82■□□□□ 0.44
FOXF1-201ENST00000262426 ERBB4Q15303 1308 aa17.82■□□□□ 0.44
FOXF1-201ENST00000262426 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
FOXF1-201ENST00000262426 ASAP1Q9ULH1 1129 aa17.82■□□□□ 0.44
FOXF1-201ENST00000262426 SOS1Q07889 1333 aaPredicted RBP17.81■□□□□ 0.44
FOXF1-201ENST00000262426 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
FOXF1-201ENST00000262426 TBC1D9Q6ZT07 1266 aa17.81■□□□□ 0.44
FOXF1-201ENST00000262426 NUTM1Q86Y26 1132 aa17.81■□□□□ 0.44
FOXF1-201ENST00000262426 BMP2KLQ5H9B9 411 aa17.8■□□□□ 0.44
FOXF1-201ENST00000262426 KLHDC4Q8TBB5 520 aa17.8■□□□□ 0.44
FOXF1-201ENST00000262426 C22orf23Q9BZE7 217 aa17.8■□□□□ 0.44
FOXF1-201ENST00000262426 ROBO1Q9Y6N7 1651 aa17.8■□□□□ 0.44
FOXF1-201ENST00000262426 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
FOXF1-201ENST00000262426 IGKV5-2P06315 115 aa17.8■□□□□ 0.44
FOXF1-201ENST00000262426 CLCN1P35523 988 aa17.8■□□□□ 0.44
FOXF1-201ENST00000262426 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
FOXF1-201ENST00000262426 TRIM44Q96DX7 344 aaPredicted RBP17.8■□□□□ 0.44
FOXF1-201ENST00000262426 TBC1D32Q96NH3 1257 aa17.79■□□□□ 0.44
FOXF1-201ENST00000262426 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
FOXF1-201ENST00000262426 NBPF14Q5TI25 921 aa17.79■□□□□ 0.44
FOXF1-201ENST00000262426 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
FOXF1-201ENST00000262426 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
FOXF1-201ENST00000262426 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
FOXF1-201ENST00000262426 TTLL7Q6ZT98 887 aa17.78■□□□□ 0.44
FOXF1-201ENST00000262426 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
FOXF1-201ENST00000262426 ANKRD13DQ6ZTN6 518 aa17.78■□□□□ 0.44
FOXF1-201ENST00000262426 SIL1Q9H173 461 aa17.78■□□□□ 0.44
FOXF1-201ENST00000262426 ZBTB3Q9H5J0 574 aa17.78■□□□□ 0.44
FOXF1-201ENST00000262426 SCN11AQ9UI33 1791 aa17.78■□□□□ 0.44
FOXF1-201ENST00000262426 SDSP20132 328 aa17.77■□□□□ 0.44
FOXF1-201ENST00000262426 TTC22Q5TAA0 569 aa17.77■□□□□ 0.44
FOXF1-201ENST00000262426 SUCLG2Q96I99 432 aa17.77■□□□□ 0.44
FOXF1-201ENST00000262426 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms