RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 RNF20Q5VTR2 975 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 JARID2Q92833 1246 aaPredicted RBP5.67□□□□□ -1.5
USP44-201ENST00000258499 TFIP11Q9UBB9 837 aaKnown RBP5.67□□□□□ -1.5
USP44-201ENST00000258499 ZKSCAN5Q9Y2L8 839 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 ADCY5O95622 1261 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 DDX58O95786 925 aaKnown RBP5.67□□□□□ -1.5
USP44-201ENST00000258499 AK2P54819 239 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 CKAP2LQ8IYA6 745 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 PTCH1Q13635 1447 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 ADGRB1O14514 1584 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 NBPF7P0C2Y1 421 aaPredicted RBP5.67□□□□□ -1.5
USP44-201ENST00000258499 GJB2P29033 226 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 CCDC183Q5T5S1 534 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 C17orf53Q8N3J3 647 aaPredicted RBP5.67□□□□□ -1.5
USP44-201ENST00000258499 DDX11Q96FC9 970 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 NEUROD6Q96NK8 337 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 TRIM5Q9C035 493 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 ZMYND15Q9H091 742 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 NLRP2Q9NX02 1062 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 MYOM1P52179 1685 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 LRRC7Q96NW7 1537 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 FAM177BA6PVY3 158 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 BECN2A8MW95 431 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 GOLGA6L19H0YKK7 550 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 DNM1Q05193 864 aaKnown RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 GORABQ5T7V8 394 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 BLOC1S2Q6QNY1 142 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 PKNOX2Q96KN3 472 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 SOS1Q07889 1333 aaPredicted RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 ARAP3Q8WWN8 1544 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 DDIT3P35638 169 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 ANAPC15P60006 121 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 KRT85P78386 507 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 PLEKHO1Q53GL0 409 aaPredicted RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 FAM173BQ6P4H8 233 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 PPP1R9BQ96SB3 815 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 USP44Q9H0E7 712 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 PRDM10Q9NQV6 1147 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 MAP3K2Q9Y2U5 619 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 HTATSF1O43719 755 aaKnown RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 BRD1O95696 1058 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 CCDC192P0DO97 292 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 ZSCAN22P10073 491 aaPredicted RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 SYT1P21579 422 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 SF3A1Q15459 793 aaKnown RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 CWF19L2Q2TBE0 894 aaKnown RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 SASS6Q6UVJ0 657 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 LRRC59Q96AG4 307 aaKnown RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 PDCL3Q9H2J4 239 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 ECHDC1Q9NTX5 307 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 NOL7Q9UMY1 257 aaKnown RBP5.66□□□□□ -1.5
USP44-201ENST00000258499 NRXN1Q9ULB1 1477 aa5.66□□□□□ -1.5
USP44-201ENST00000258499 PSMA5P28066 241 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 FLT4P35916 1363 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 TNMDQ9H2S6 317 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 ZDHHC9Q9Y397 364 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 SETBP1Q9Y6X0 1596 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 INO80Q9ULG1 1556 aaPredicted RBP5.65□□□□□ -1.5
USP44-201ENST00000258499 KDM4AO75164 1064 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 PIP4K2AP48426 406 aaPredicted RBP5.65□□□□□ -1.5
USP44-201ENST00000258499 ZC3H6P61129 1189 aaKnown RBP5.65□□□□□ -1.5
USP44-201ENST00000258499 CHRDL2Q6WN34 429 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 TTC5Q8N0Z6 440 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 IL17REQ8NFR9 667 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 TSC1Q92574 1164 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 LGR6Q9HBX8 967 aa5.65□□□□□ -1.5
USP44-201ENST00000258499 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.65□□□□□ -1.5
USP44-201ENST00000258499 LETM1O95202 739 aaPredicted RBP5.65□□□□□ -1.51
USP44-201ENST00000258499 LTKP29376 864 aa5.65□□□□□ -1.51
USP44-201ENST00000258499 UBE2HP62256 183 aa5.65□□□□□ -1.51
USP44-201ENST00000258499 RAPGEF4Q8WZA2 1011 aa5.65□□□□□ -1.51
USP44-201ENST00000258499 INTS4Q96HW7 963 aaKnown RBP5.65□□□□□ -1.51
USP44-201ENST00000258499 SPATA32Q96LK8 384 aa5.65□□□□□ -1.51
USP44-201ENST00000258499 NUP62CLQ9H1M0 184 aa5.65□□□□□ -1.51
USP44-201ENST00000258499 KIAA0232Q92628 1395 aa5.65□□□□□ -1.51
USP44-201ENST00000258499 TNRQ92752 1358 aa5.65□□□□□ -1.51
USP44-201ENST00000258499 KCNQ3O43525 872 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 PDCP20941 246 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 ERC1Q8IUD2 1116 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 SNX14Q9Y5W7 946 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 F13A1P00488 732 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 HOXC9P31274 260 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 GNL2Q13823 731 aaKnown RBP5.64□□□□□ -1.51
USP44-201ENST00000258499 RASEFQ8IZ41 740 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 THEMISQ8N1K5 641 aaPredicted RBP5.64□□□□□ -1.51
USP44-201ENST00000258499 FMNL2Q96PY5 1086 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 MAP7D2Q96T17 732 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 LRRC2Q9BYS8 371 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 DBF4Q9UBU7 674 aaPredicted RBP5.64□□□□□ -1.51
USP44-201ENST00000258499 RBM8AQ9Y5S9 174 aaKnown RBP5.64□□□□□ -1.51
USP44-201ENST00000258499 MROH2AA6NES4 1674 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 AATKQ6ZMQ8 1374 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 SGSM2O43147 1006 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 MAP3K11Q16584 847 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 TAF7LQ5H9L4 462 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 KLHDC4Q8TBB5 520 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 PHF8Q9UPP1 1060 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 PTPRMP28827 1452 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 KIF24Q5T7B8 1368 aa5.64□□□□□ -1.51
USP44-201ENST00000258499 HMGN5P82970 282 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms