RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 RAB11FIP3O75154 756 aa20.72■□□□□ 0.91
SLC52A1-201ENST00000254853 KIAA1211Q6ZU35 1233 aa20.72■□□□□ 0.91
SLC52A1-201ENST00000254853 NOL7Q9UMY1 257 aaKnown RBP20.72■□□□□ 0.91
SLC52A1-201ENST00000254853 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
SLC52A1-201ENST00000254853 KIF13AQ9H1H9 1805 aa20.71■□□□□ 0.91
SLC52A1-201ENST00000254853 TPM2P07951 284 aa20.71■□□□□ 0.91
SLC52A1-201ENST00000254853 FOXD4L6Q3SYB3 417 aaPredicted RBP20.71■□□□□ 0.91
SLC52A1-201ENST00000254853 FOXD4L3Q6VB84 417 aaPredicted RBP20.71■□□□□ 0.91
SLC52A1-201ENST00000254853 PI4K2BQ8TCG2 481 aa20.71■□□□□ 0.91
SLC52A1-201ENST00000254853 RHPN1Q8TCX5 695 aa20.71■□□□□ 0.91
SLC52A1-201ENST00000254853 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.71■□□□□ 0.91
SLC52A1-201ENST00000254853 EIF2S2P20042 333 aaKnown RBP20.7■□□□□ 0.9
SLC52A1-201ENST00000254853 HSP90AA2PQ14568 343 aaPredicted RBP20.7■□□□□ 0.9
SLC52A1-201ENST00000254853 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
SLC52A1-201ENST00000254853 ABTB2Q8N961 1025 aa20.7■□□□□ 0.9
SLC52A1-201ENST00000254853 MARF1Q9Y4F3 1742 aaKnown RBP20.7■□□□□ 0.9
SLC52A1-201ENST00000254853 EPB41L2O43491 1005 aaKnown RBP20.7■□□□□ 0.9
SLC52A1-201ENST00000254853 RNF214Q8ND24 703 aa20.7■□□□□ 0.9
SLC52A1-201ENST00000254853 GDPD2Q9HCC8 539 aa20.7■□□□□ 0.9
SLC52A1-201ENST00000254853 SRGAP3O43295 1099 aa20.69■□□□□ 0.9
SLC52A1-201ENST00000254853 ARHGAP23Q9P227 1491 aa20.69■□□□□ 0.9
SLC52A1-201ENST00000254853 SLIT1O75093 1534 aa20.69■□□□□ 0.9
SLC52A1-201ENST00000254853 RRP9O43818 475 aaKnown RBP20.68■□□□□ 0.9
SLC52A1-201ENST00000254853 NBPF7P0C2Y1 421 aaPredicted RBP20.68■□□□□ 0.9
SLC52A1-201ENST00000254853 SGSM2O43147 1006 aa20.68■□□□□ 0.9
SLC52A1-201ENST00000254853 GADD45BO75293 160 aaPredicted RBP20.68■□□□□ 0.9
SLC52A1-201ENST00000254853 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.67■□□□□ 0.9
SLC52A1-201ENST00000254853 KIF1BPQ96EK5 621 aa20.67■□□□□ 0.9
SLC52A1-201ENST00000254853 RAD50Q92878 1312 aa20.67■□□□□ 0.9
SLC52A1-201ENST00000254853 WDR33Q9C0J8 1336 aaKnown RBP20.67■□□□□ 0.9
SLC52A1-201ENST00000254853 PLEKHG5O94827 1062 aa20.67■□□□□ 0.9
SLC52A1-201ENST00000254853 SNX14Q9Y5W7 946 aa20.67■□□□□ 0.9
SLC52A1-201ENST00000254853 ANKARQ7Z5J8 1434 aa20.66■□□□□ 0.9
SLC52A1-201ENST00000254853 EIF4A1P60842 406 aaKnown RBP20.66■□□□□ 0.9
SLC52A1-201ENST00000254853 USP48Q86UV5 1035 aa20.66■□□□□ 0.9
SLC52A1-201ENST00000254853 TSPY26PQ9H489 355 aa20.66■□□□□ 0.9
SLC52A1-201ENST00000254853 CHPF2Q9P2E5 772 aa20.66■□□□□ 0.9
SLC52A1-201ENST00000254853 ZNF500O60304 480 aaPredicted RBP20.66■□□□□ 0.9
SLC52A1-201ENST00000254853 LSG1Q9H089 658 aaKnown RBP20.66■□□□□ 0.9
SLC52A1-201ENST00000254853 CEMIPQ8WUJ3 1361 aa20.65■□□□□ 0.9
SLC52A1-201ENST00000254853 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
SLC52A1-201ENST00000254853 BEND3Q5T5X7 828 aa20.65■□□□□ 0.9
SLC52A1-201ENST00000254853 C14orf37Q86TY3 774 aa20.65■□□□□ 0.9
SLC52A1-201ENST00000254853 SYAP1Q96A49 352 aaPredicted RBP20.65■□□□□ 0.9
SLC52A1-201ENST00000254853 LGR6Q9HBX8 967 aa20.65■□□□□ 0.9
SLC52A1-201ENST00000254853 RASEFQ8IZ41 740 aa20.65■□□□□ 0.9
SLC52A1-201ENST00000254853 ZKSCAN5Q9Y2L8 839 aa20.65■□□□□ 0.9
SLC52A1-201ENST00000254853 PI4KAP2A4QPH2 592 aa20.64■□□□□ 0.89
SLC52A1-201ENST00000254853 KCNQ3O43525 872 aa20.64■□□□□ 0.89
SLC52A1-201ENST00000254853 KCNA6P17658 529 aa20.64■□□□□ 0.89
SLC52A1-201ENST00000254853 CNTROBQ8N137 903 aa20.64■□□□□ 0.89
SLC52A1-201ENST00000254853 PI4KAP1Q8N8J0 262 aa20.64■□□□□ 0.89
SLC52A1-201ENST00000254853 DNAAF4Q8WXU2 420 aa20.64■□□□□ 0.89
SLC52A1-201ENST00000254853 TTC14Q96N46 770 aa20.64■□□□□ 0.89
SLC52A1-201ENST00000254853 XPCQ01831 940 aaPredicted RBP20.64■□□□□ 0.89
SLC52A1-201ENST00000254853 LARP6Q9BRS8 491 aaKnown RBP20.63■□□□□ 0.89
SLC52A1-201ENST00000254853 ANXA1P04083 346 aa20.63■□□□□ 0.89
SLC52A1-201ENST00000254853 AK2P54819 239 aa20.63■□□□□ 0.89
SLC52A1-201ENST00000254853 CWC27Q6UX04 472 aaKnown RBP20.63■□□□□ 0.89
SLC52A1-201ENST00000254853 CCDC39Q9UFE4 941 aa20.63■□□□□ 0.89
SLC52A1-201ENST00000254853 USP54Q70EL1 1684 aa20.62■□□□□ 0.89
SLC52A1-201ENST00000254853 NBPF6Q5VWK0 638 aa20.61■□□□□ 0.89
SLC52A1-201ENST00000254853 RUFY3Q7L099 469 aa20.61■□□□□ 0.89
SLC52A1-201ENST00000254853 NBPF4Q96M43 638 aa20.61■□□□□ 0.89
SLC52A1-201ENST00000254853 SPG7Q9UQ90 795 aa20.61■□□□□ 0.89
SLC52A1-201ENST00000254853 HOXB7P09629 217 aa20.6■□□□□ 0.89
SLC52A1-201ENST00000254853 R3HCC1Q9Y3T6 440 aaKnown RBP20.6■□□□□ 0.89
SLC52A1-201ENST00000254853 MED1Q15648 1581 aaPredicted RBP20.6■□□□□ 0.89
SLC52A1-201ENST00000254853 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
SLC52A1-201ENST00000254853 IP6K1Q92551 441 aa20.6■□□□□ 0.89
SLC52A1-201ENST00000254853 CNPY2Q9Y2B0 182 aa20.6■□□□□ 0.89
SLC52A1-201ENST00000254853 PHF14O94880 888 aa20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 CPA1P15085 419 aa20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 MCM5P33992 734 aa20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 OS9Q13438 667 aaPredicted RBP20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 HSP90AB4PQ58FF6 505 aa20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 TMEM87AQ8NBN3 555 aa20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 LIMCH1Q9UPQ0 1083 aa20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 USP42Q9H9J4 1324 aaKnown RBP20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 ADCY9O60503 1353 aa20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 ZSCAN22P10073 491 aaPredicted RBP20.59■□□□□ 0.89
SLC52A1-201ENST00000254853 TERF1P54274 439 aa20.58■□□□□ 0.89
SLC52A1-201ENST00000254853 TTC41PQ6P2S7 1318 aa20.58■□□□□ 0.88
SLC52A1-201ENST00000254853 GLRX3O76003 335 aaKnown RBP20.57■□□□□ 0.88
SLC52A1-201ENST00000254853 SYT1P21579 422 aa20.57■□□□□ 0.88
SLC52A1-201ENST00000254853 STX6O43752 255 aa20.57■□□□□ 0.88
SLC52A1-201ENST00000254853 CASTP20810 708 aaKnown RBP20.57■□□□□ 0.88
SLC52A1-201ENST00000254853 DIAPH3Q9NSV4 1193 aa20.57■□□□□ 0.88
SLC52A1-201ENST00000254853 LTN1O94822 1766 aa20.57■□□□□ 0.88
SLC52A1-201ENST00000254853 CRYBG1Q9Y4K1 1723 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 KDM3BQ7LBC6 1761 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 ZBTB7CA1YPR0 619 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 BTBD11A6QL63 1104 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 LARGE1O95461 756 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 PTH1RQ03431 593 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 TPRNQ4KMQ1 711 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 PHF8Q9UPP1 1060 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 SMC3Q9UQE7 1217 aa20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.56■□□□□ 0.88
SLC52A1-201ENST00000254853 TEFQ10587 303 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms