RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 PTPRCP08575 1304 aa24.43■■□□□ 1.5
RARA-201ENST00000254066 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
RARA-201ENST00000254066 PALD1Q9ULE6 856 aa24.43■■□□□ 1.5
RARA-201ENST00000254066 ELL2O00472 640 aaPredicted RBP24.42■■□□□ 1.5
RARA-201ENST00000254066 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.42■■□□□ 1.5
RARA-201ENST00000254066 PLCD3Q8N3E9 789 aa24.42■■□□□ 1.5
RARA-201ENST00000254066 TIGD1Q96MW7 591 aa24.42■■□□□ 1.5
RARA-201ENST00000254066 FAM53CQ9NYF3 392 aa24.42■■□□□ 1.5
RARA-201ENST00000254066 KIAA0232Q92628 1395 aa24.42■■□□□ 1.5
RARA-201ENST00000254066 PLCB2Q00722 1185 aa24.42■■□□□ 1.5
RARA-201ENST00000254066 CCDC112Q8NEF3 446 aa24.42■■□□□ 1.5
RARA-201ENST00000254066 SLC52A1Q9NWF4 448 aa24.42■■□□□ 1.5
RARA-201ENST00000254066 RNF216Q9NWF9 866 aaPredicted RBP24.42■■□□□ 1.5
RARA-201ENST00000254066 CALCOCO1Q9P1Z2 691 aa24.42■■□□□ 1.5
RARA-201ENST00000254066 FAM200AQ8TCP9 573 aa24.41■■□□□ 1.5
RARA-201ENST00000254066 SALL3Q9BXA9 1300 aa24.41■■□□□ 1.5
RARA-201ENST00000254066 PHACTR3Q96KR7 559 aa24.41■■□□□ 1.5
RARA-201ENST00000254066 DNAJC2Q99543 621 aaKnown RBP24.41■■□□□ 1.5
RARA-201ENST00000254066 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.41■■□□□ 1.5
RARA-201ENST00000254066 PIK3C2BO00750 1634 aa24.41■■□□□ 1.5
RARA-201ENST00000254066 STX6O43752 255 aa24.4■■□□□ 1.5
RARA-201ENST00000254066 F13A1P00488 732 aa24.4■■□□□ 1.5
RARA-201ENST00000254066 CHGAP10645 457 aaKnown RBP24.4■■□□□ 1.5
RARA-201ENST00000254066 CHMLP26374 656 aa24.4■■□□□ 1.5
RARA-201ENST00000254066 GIMAP6Q6P9H5 292 aa24.4■■□□□ 1.5
RARA-201ENST00000254066 ZNF397Q8NF99 534 aaPredicted RBP24.4■■□□□ 1.5
RARA-201ENST00000254066 THUMPD2Q9BTF0 503 aaKnown RBP24.4■■□□□ 1.5
RARA-201ENST00000254066 TNNT1P13805 278 aa24.39■■□□□ 1.5
RARA-201ENST00000254066 SPC24Q8NBT2 197 aa24.39■■□□□ 1.5
RARA-201ENST00000254066 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.5
RARA-201ENST00000254066 EID1Q9Y6B2 187 aa24.39■■□□□ 1.5
RARA-201ENST00000254066 RIMS2Q9UQ26 1411 aa24.39■■□□□ 1.49
RARA-201ENST00000254066 IRX5P78411 483 aaPredicted RBP24.39■■□□□ 1.49
RARA-201ENST00000254066 FOXD4L6Q3SYB3 417 aaPredicted RBP24.39■■□□□ 1.49
RARA-201ENST00000254066 FOXD4L3Q6VB84 417 aaPredicted RBP24.39■■□□□ 1.49
RARA-201ENST00000254066 HDGFL2Q7Z4V5 671 aaPredicted RBP24.39■■□□□ 1.49
RARA-201ENST00000254066 ANO2Q9NQ90 1003 aa24.39■■□□□ 1.49
RARA-201ENST00000254066 MSH6P52701 1360 aa24.38■■□□□ 1.49
RARA-201ENST00000254066 PTGS1P23219 599 aa24.37■■□□□ 1.49
RARA-201ENST00000254066 SRPK2P78362 688 aaKnown RBP24.37■■□□□ 1.49
RARA-201ENST00000254066 TSPYL1Q9H0U9 437 aa24.37■■□□□ 1.49
RARA-201ENST00000254066 SLFNL1Q499Z3 407 aa24.37■■□□□ 1.49
RARA-201ENST00000254066 HSPA4P34932 840 aa24.36■■□□□ 1.49
RARA-201ENST00000254066 KCNJ4P48050 445 aa24.36■■□□□ 1.49
RARA-201ENST00000254066 TMEM2Q9UHN6 1383 aa24.36■■□□□ 1.49
RARA-201ENST00000254066 IDI1Q13907 227 aa24.36■■□□□ 1.49
RARA-201ENST00000254066 TXNDC2Q86VQ3 553 aa24.35■■□□□ 1.49
RARA-201ENST00000254066 SYT1P21579 422 aa24.35■■□□□ 1.49
RARA-201ENST00000254066 NOL8Q76FK4 1167 aaKnown RBP24.35■■□□□ 1.49
RARA-201ENST00000254066 POLKQ9UBT6 870 aa24.35■■□□□ 1.49
RARA-201ENST00000254066 TULP2O00295 520 aa24.34■■□□□ 1.49
RARA-201ENST00000254066 STAP2Q9UGK3 403 aa24.34■■□□□ 1.49
RARA-201ENST00000254066 AOX1Q06278 1338 aa24.34■■□□□ 1.49
RARA-201ENST00000254066 APBB1O00213 710 aa24.34■■□□□ 1.49
RARA-201ENST00000254066 C16orf45Q96MC5 204 aaPredicted RBP24.34■■□□□ 1.49
RARA-201ENST00000254066 DLG5Q8TDM6 1919 aa24.34■■□□□ 1.49
RARA-201ENST00000254066 CCDC186Q7Z3E2 898 aa24.33■■□□□ 1.49
RARA-201ENST00000254066 UPF3BQ9BZI7 483 aaKnown RBP24.33■■□□□ 1.49
RARA-201ENST00000254066 MEIS3Q99687 375 aa24.33■■□□□ 1.48
RARA-201ENST00000254066 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
RARA-201ENST00000254066 AEBP1Q8IUX7 1158 aa24.32■■□□□ 1.48
RARA-201ENST00000254066 RGS22Q8NE09 1264 aa24.32■■□□□ 1.48
RARA-201ENST00000254066 CCDC171Q6TFL3 1326 aa24.32■■□□□ 1.48
RARA-201ENST00000254066 FIBPO43427 364 aa24.32■■□□□ 1.48
RARA-201ENST00000254066 ZSCAN25Q6NSZ9 544 aa24.32■■□□□ 1.48
RARA-201ENST00000254066 C14orf37Q86TY3 774 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 PLA2G4DQ86XP0 818 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 TTC14Q96N46 770 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 LIMCH1Q9UPQ0 1083 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 NEXMIFQ5QGS0 1516 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 NEMFO60524 1076 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 LTKP29376 864 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 MAP3K11Q16584 847 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 SMC3Q9UQE7 1217 aa24.31■■□□□ 1.48
RARA-201ENST00000254066 CDC25BP30305 580 aa24.3■■□□□ 1.48
RARA-201ENST00000254066 CDK12Q9NYV4 1490 aaPredicted RBP24.3■■□□□ 1.48
RARA-201ENST00000254066 IL13P35225 146 aa24.3■■□□□ 1.48
RARA-201ENST00000254066 CEP135Q66GS9 1140 aa24.3■■□□□ 1.48
RARA-201ENST00000254066 LRRCC1Q9C099 1032 aa24.3■■□□□ 1.48
RARA-201ENST00000254066 HMOX1P09601 288 aa24.29■■□□□ 1.48
RARA-201ENST00000254066 UBAP1LF5GYI3 381 aa24.29■■□□□ 1.48
RARA-201ENST00000254066 ERO1AQ96HE7 468 aa24.29■■□□□ 1.48
RARA-201ENST00000254066 MRVI1Q9Y6F6 885 aa24.29■■□□□ 1.48
RARA-201ENST00000254066 ZNF75DP51815 510 aa24.28■■□□□ 1.48
RARA-201ENST00000254066 TPD52L1Q16890 204 aaPredicted RBP24.28■■□□□ 1.48
RARA-201ENST00000254066 ELP1O95163 1332 aa24.28■■□□□ 1.48
RARA-201ENST00000254066 IRX3P78415 501 aaPredicted RBP24.27■■□□□ 1.48
RARA-201ENST00000254066 TYRO3Q06418 890 aa24.27■■□□□ 1.48
RARA-201ENST00000254066 KMT5BQ4FZB7 885 aa24.27■■□□□ 1.48
RARA-201ENST00000254066 TDRD7Q8NHU6 1098 aaKnown RBP24.27■■□□□ 1.48
RARA-201ENST00000254066 VGLL3A8MV65 326 aa24.27■■□□□ 1.48
RARA-201ENST00000254066 CAVIN2O95810 425 aa24.27■■□□□ 1.48
RARA-201ENST00000254066 CCT4P50991 539 aaKnown RBP24.27■■□□□ 1.48
RARA-201ENST00000254066 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.27■■□□□ 1.48
RARA-201ENST00000254066 RTF1Q92541 710 aaKnown RBP24.27■■□□□ 1.48
RARA-201ENST00000254066 NUP62CLQ9H1M0 184 aa24.27■■□□□ 1.48
RARA-201ENST00000254066 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
RARA-201ENST00000254066 DRC7Q8IY82 874 aa24.26■■□□□ 1.47
RARA-201ENST00000254066 KIF1BPQ96EK5 621 aa24.26■■□□□ 1.47
RARA-201ENST00000254066 YTHDC2Q9H6S0 1430 aaKnown RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms