RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 FSD2A1L4K1 749 aa15.29■□□□□ 0.04
NEK9-201ENST00000238616 MAP9Q49MG5 647 aa15.29■□□□□ 0.04
NEK9-201ENST00000238616 ISM2Q6H9L7 571 aa15.29■□□□□ 0.04
NEK9-201ENST00000238616 ODF2LQ9ULJ1 636 aa15.28■□□□□ 0.04
NEK9-201ENST00000238616 CPLX3Q8WVH0 158 aa15.28■□□□□ 0.04
NEK9-201ENST00000238616 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
NEK9-201ENST00000238616 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
NEK9-201ENST00000238616 BOLA2Q9H3K6 86 aa15.28■□□□□ 0.04
NEK9-201ENST00000238616 A0A1W2PRG0 241 aa15.27■□□□□ 0.04
NEK9-201ENST00000238616 CETN1Q12798 172 aa15.27■□□□□ 0.04
NEK9-201ENST00000238616 ATP2B3Q16720 1220 aa15.27■□□□□ 0.04
NEK9-201ENST00000238616 SLC12A7Q9Y666 1083 aa15.27■□□□□ 0.04
NEK9-201ENST00000238616 IQCA1Q86XH1 822 aa15.27■□□□□ 0.04
NEK9-201ENST00000238616 CFAP58Q5T655 872 aa15.27■□□□□ 0.03
NEK9-201ENST00000238616 UTP14AQ9BVJ6 771 aaKnown RBP15.27■□□□□ 0.03
NEK9-201ENST00000238616 GCC1Q96CN9 775 aa15.27■□□□□ 0.03
NEK9-201ENST00000238616 FAM212AQ96EL1 285 aa15.27■□□□□ 0.03
NEK9-201ENST00000238616 UBXN4Q92575 508 aa15.26■□□□□ 0.03
NEK9-201ENST00000238616 CFAP57Q96MR6 1250 aa15.26■□□□□ 0.03
NEK9-201ENST00000238616 SYCE3A1L190 88 aa15.26■□□□□ 0.03
NEK9-201ENST00000238616 POLR3GO15318 223 aaPredicted RBP15.26■□□□□ 0.03
NEK9-201ENST00000238616 CTCFLQ8NI51 663 aaPredicted RBP15.26■□□□□ 0.03
NEK9-201ENST00000238616 CDCA7LQ96GN5 454 aa15.26■□□□□ 0.03
NEK9-201ENST00000238616 BAG4O95429 457 aaKnown RBP15.26■□□□□ 0.03
NEK9-201ENST00000238616 KIF4BQ2VIQ3 1234 aa15.26■□□□□ 0.03
NEK9-201ENST00000238616 MAP3K11Q16584 847 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 NGLY1Q96IV0 654 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 SSRP1Q08945 709 aaKnown RBP15.25■□□□□ 0.03
NEK9-201ENST00000238616 BRPF3Q9ULD4 1205 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 MYO1BO43795 1136 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 CCT2P78371 535 aaKnown RBP15.25■□□□□ 0.03
NEK9-201ENST00000238616 CATIPQ7Z7H3 387 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 CCDC175P0C221 793 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 CABP1Q9NZU7 370 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 FYCO1Q9BQS8 1478 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 MPHOSPH6Q99547 160 aaKnown RBP15.25■□□□□ 0.03
NEK9-201ENST00000238616 A0A087WZG4 1122 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 AKAP2Q9Y2D5 859 aa15.25■□□□□ 0.03
NEK9-201ENST00000238616 CCDC83Q8IWF9 413 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 PROCA1Q8NCQ7 364 aaPredicted RBP15.24■□□□□ 0.03
NEK9-201ENST00000238616 MTIF2P46199 727 aaKnown RBP15.24■□□□□ 0.03
NEK9-201ENST00000238616 CCDC160A6NGH7 325 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 IFIT5Q13325 482 aaKnown RBP15.24■□□□□ 0.03
NEK9-201ENST00000238616 FERMT3Q86UX7 667 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 CUX1P39880 1505 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 ACTN2P35609 894 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 MXRA7P84157 204 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 KRT32Q14532 448 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 SIRT1Q96EB6 747 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 C8orf76Q96K31 380 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 MYD88Q99836 296 aa15.24■□□□□ 0.03
NEK9-201ENST00000238616 LARP6Q9BRS8 491 aaKnown RBP15.24■□□□□ 0.03
NEK9-201ENST00000238616 IFIT1P09914 478 aaKnown RBP15.23■□□□□ 0.03
NEK9-201ENST00000238616 TOP1P11387 765 aaKnown RBP15.23■□□□□ 0.03
NEK9-201ENST00000238616 GPTP24298 496 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 TAF12Q16514 161 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 CHD1LQ86WJ1 897 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 SREK1Q8WXA9 508 aaKnown RBP15.23■□□□□ 0.03
NEK9-201ENST00000238616 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 FAM107BQ9H098 131 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 TRMT1Q9NXH9 659 aaKnown RBP15.23■□□□□ 0.03
NEK9-201ENST00000238616 GNAT3A8MTJ3 354 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 ZNF213O14771 459 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 CCDC174Q6PII3 467 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 SUPT6HQ7KZ85 1726 aaKnown RBP15.23■□□□□ 0.03
NEK9-201ENST00000238616 CNNM3Q8NE01 707 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 JADE2Q9NQC1 790 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 MAP3K12Q12852 859 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 EXOC6BQ9Y2D4 811 aa15.23■□□□□ 0.03
NEK9-201ENST00000238616 USO1O60763 962 aaKnown RBP15.22■□□□□ 0.03
NEK9-201ENST00000238616 SLF2Q8IX21 1173 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 CCDC63Q8NA47 563 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 URI1O94763 535 aaPredicted RBP15.22■□□□□ 0.03
NEK9-201ENST00000238616 SLC5A1P13866 664 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 GPATCH11Q8N954 259 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 TRERF1Q96PN7 1200 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 BIN2Q9UBW5 565 aaPredicted RBP15.22■□□□□ 0.03
NEK9-201ENST00000238616 KIF21BO75037 1637 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 PAFAH1B1P43034 410 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 PTPN14Q15678 1187 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 THEMISQ8N1K5 641 aaPredicted RBP15.22■□□□□ 0.03
NEK9-201ENST00000238616 PNISRQ8TF01 805 aaKnown RBP15.22■□□□□ 0.03
NEK9-201ENST00000238616 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 SFPQP23246 707 aaKnown RBP eCLIP15.22■□□□□ 0.03
NEK9-201ENST00000238616 ATF7IPQ6VMQ6 1270 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 MAATS1Q7Z4T9 603 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 CCDC196A0A1B0GTZ2 297 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 NDC80O14777 642 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 CTR9Q6PD62 1173 aa15.22■□□□□ 0.03
NEK9-201ENST00000238616 IPO4Q8TEX9 1081 aaKnown RBP15.22■□□□□ 0.03
NEK9-201ENST00000238616 PHACTR2O75167 634 aa15.21■□□□□ 0.03
NEK9-201ENST00000238616 LRRC45Q96CN5 670 aa15.21■□□□□ 0.03
NEK9-201ENST00000238616 PRDM10Q9NQV6 1147 aa15.21■□□□□ 0.03
NEK9-201ENST00000238616 IFIT3O14879 490 aaKnown RBP15.21■□□□□ 0.03
NEK9-201ENST00000238616 F8W031 263 aaPredicted RBP15.21■□□□□ 0.03
NEK9-201ENST00000238616 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
NEK9-201ENST00000238616 USHBP1Q8N6Y0 703 aa15.21■□□□□ 0.03
NEK9-201ENST00000238616 ZBTB9Q96C00 473 aa15.21■□□□□ 0.03
NEK9-201ENST00000238616 TMEM110-MUSTN1A8MSY1 372 aa15.21■□□□□ 0.02
NEK9-201ENST00000238616 CCDC40Q4G0X9 1142 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms