RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 RSPH14Q9UHP6 348 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
APOB-201ENST00000233242 C9orf84Q5VXU9 1444 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CTAGE1Q96RT6 745 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CAPN2P17655 700 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 A0A1B0GUL7 405 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 IFI16Q16666 785 aaKnown RBP9.49□□□□□ -0.89
APOB-201ENST00000233242 PRPF40BQ6NWY9 871 aaKnown RBP9.49□□□□□ -0.89
APOB-201ENST00000233242 MSL1Q68DK7 614 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 PPM1EQ8WY54 764 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 SPECC1Q5M775 1068 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 CFTRP13569 1480 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 TUBB2AQ13885 445 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 CCDC121Q6ZUS5 278 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 SSH1Q8WYL5 1049 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 TUBB2BQ9BVA1 445 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.49□□□□□ -0.894e-37■□□□□ 8.2
APOB-201ENST00000233242 PSME1Q06323 249 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 RAB3GAP1Q15042 981 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 ZNF692Q9BU19 519 aaPredicted RBP9.49□□□□□ -0.89
APOB-201ENST00000233242 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 SPAG1Q07617 926 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 IL16Q14005 1332 aa9.49□□□□□ -0.89
APOB-201ENST00000233242 DAPK1P53355 1430 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 CEP63Q96MT8 703 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 RPGRIP1LQ68CZ1 1315 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 FGD5Q6ZNL6 1462 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 FANCD2Q9BXW9 1451 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 DUSP27Q5VZP5 1158 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 HOOK3Q86VS8 718 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 RSRC1Q96IZ7 334 aaKnown RBP9.48□□□□□ -0.89
APOB-201ENST00000233242 MAATS1Q7Z4T9 603 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 A0A1B0GUA9 196 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 HLTFQ14527 1009 aaKnown RBP eCLIP9.48□□□□□ -0.89
APOB-201ENST00000233242 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 ZSCAN22P10073 491 aaPredicted RBP9.48□□□□□ -0.89
APOB-201ENST00000233242 SEPT11Q9NVA2 429 aaKnown RBP9.48□□□□□ -0.89
APOB-201ENST00000233242 ZNF644Q9H582 1327 aaPredicted RBP9.48□□□□□ -0.89
APOB-201ENST00000233242 GSTTP1A0A1W2PQM5 241 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 TTC22Q5TAA0 569 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 CCDC102BQ68D86 513 aa9.48□□□□□ -0.89
APOB-201ENST00000233242 CTAGE9A4FU28 777 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 B4GALNT4Q76KP1 1039 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 TTC14Q96N46 770 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 PTPRCP08575 1304 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 NBPF11Q86T75 865 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 KIF6Q6ZMV9 814 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 CNNM3Q8NE01 707 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 RAB34Q9BZG1 259 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 EVA1CP58658 441 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 CACNA2D4Q7Z3S7 1137 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 BMP15O95972 392 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 CCDC113Q9H0I3 377 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 SSR1P43307 286 aaKnown RBP9.47□□□□□ -0.89
APOB-201ENST00000233242 POTEDQ86YR6 584 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 ARFGAP2Q8N6H7 521 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 PANK2Q9BZ23 570 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 NUCB1Q02818 461 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 CCDC50Q8IVM0 306 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 CEP126Q9P2H0 1117 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 GBP6Q6ZN66 633 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 CCDC141Q6ZP82 1450 aa9.47□□□□□ -0.89
APOB-201ENST00000233242 ERO1AQ96HE7 468 aa9.46□□□□□ -0.89
APOB-201ENST00000233242 TDO2P48775 406 aa9.46□□□□□ -0.89
APOB-201ENST00000233242 WWC2Q6AWC2 1192 aa9.46□□□□□ -0.89
APOB-201ENST00000233242 HDXQ7Z353 690 aa9.46□□□□□ -0.89
APOB-201ENST00000233242 ARHGAP45Q92619 1136 aa9.46□□□□□ -0.89
APOB-201ENST00000233242 NSD2O96028 1365 aa9.46□□□□□ -0.89
APOB-201ENST00000233242 FYB1O15117 783 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 ANKRD18BA2A2Z9 1011 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 KLHL10Q6JEL2 608 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 CCDC155Q8N6L0 562 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 INTS4Q96HW7 963 aaKnown RBP9.46□□□□□ -0.9
APOB-201ENST00000233242 CPSF2Q9P2I0 782 aaKnown RBP9.46□□□□□ -0.9
APOB-201ENST00000233242 FSD2A1L4K1 749 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 CFAP70Q5T0N1 1121 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 TRIM27P14373 513 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 KCNG4Q8TDN1 519 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 GJB2P29033 226 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 MCM6Q14566 821 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 OTUD6BQ8N6M0 293 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 NAIPQ13075 1403 aa9.46□□□□□ -0.9
APOB-201ENST00000233242 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.45□□□□□ -0.9
APOB-201ENST00000233242 RBM28Q9NW13 759 aaKnown RBP9.45□□□□□ -0.9
APOB-201ENST00000233242 CCDC178Q5BJE1 867 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 CCDC186Q7Z3E2 898 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 MYRIPQ8NFW9 859 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 HECW1Q76N89 1606 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 EVI5LQ96CN4 794 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 RMND1Q9NWS8 449 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 NLRP6P59044 892 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 RASAL2Q9UJF2 1139 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 FBF1Q8TES7 1133 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 CYLC1P35663 651 aaPredicted RBP9.45□□□□□ -0.9
APOB-201ENST00000233242 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 PLVAPQ9BX97 442 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms