RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MAP2K2P36507 400 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 GOLIM4O00461 696 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 IRF6O14896 467 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 MCCP23508 829 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 CDC25BP30305 580 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 SMC1AQ14683 1233 aaKnown RBP15.38■□□□□ 0.05
MSH2-201ENST00000233146 CLIP2Q9UDT6 1046 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 ADAM21Q9UKJ8 722 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 ZNF853P0CG23 659 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 SDSP20132 328 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 TPRNQ4KMQ1 711 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 SGSM3Q96HU1 749 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 C1orf115Q9H7X2 142 aa15.38■□□□□ 0.05
MSH2-201ENST00000233146 CORO7P57737 925 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 CCAR2Q8N163 923 aaKnown RBP15.37■□□□□ 0.05
MSH2-201ENST00000233146 ANKRD20A12PQ8NF67 263 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 ORC3Q9UBD5 711 aaPredicted RBP15.37■□□□□ 0.05
MSH2-201ENST00000233146 CCDC196A0A1B0GTZ2 297 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 SASH3O75995 380 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 TBC1D8O95759 1140 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 LMAN1P49257 510 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 MAP2K1Q02750 393 aaPredicted RBP15.37■□□□□ 0.05
MSH2-201ENST00000233146 ZSCAN16Q9H4T2 348 aaPredicted RBP15.37■□□□□ 0.05
MSH2-201ENST00000233146 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 ADGRB2O60241 1585 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
MSH2-201ENST00000233146 ERC2O15083 957 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 RPS6KA5O75582 802 aa15.37■□□□□ 0.05
MSH2-201ENST00000233146 CASTP20810 708 aaKnown RBP15.37■□□□□ 0.05
MSH2-201ENST00000233146 SHANK2Q9UPX8 1470 aa15.36■□□□□ 0.05
MSH2-201ENST00000233146 GPATCH8Q9UKJ3 1502 aaKnown RBP15.36■□□□□ 0.05
MSH2-201ENST00000233146 TYRO3Q06418 890 aa15.36■□□□□ 0.05
MSH2-201ENST00000233146 RPAINQ86UA6 219 aa15.36■□□□□ 0.05
MSH2-201ENST00000233146 TDRD7Q8NHU6 1098 aaKnown RBP15.36■□□□□ 0.05
MSH2-201ENST00000233146 FAM212AQ96EL1 285 aa15.36■□□□□ 0.05
MSH2-201ENST00000233146 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.35■□□□□ 0.05
MSH2-201ENST00000233146 ADGRL1O94910 1474 aa15.35■□□□□ 0.05
MSH2-201ENST00000233146 ZSCAN22P10073 491 aaPredicted RBP15.35■□□□□ 0.05
MSH2-201ENST00000233146 SKILP12757 684 aa15.35■□□□□ 0.05
MSH2-201ENST00000233146 SEC31AO94979 1220 aaKnown RBP15.35■□□□□ 0.05
MSH2-201ENST00000233146 TRMT1Q9NXH9 659 aaKnown RBP15.35■□□□□ 0.05
MSH2-201ENST00000233146 MYOM2P54296 1465 aa15.34■□□□□ 0.05
MSH2-201ENST00000233146 ALDH1L2Q3SY69 923 aa15.34■□□□□ 0.05
MSH2-201ENST00000233146 LEKR1Q6ZMV7 388 aa15.34■□□□□ 0.05
MSH2-201ENST00000233146 C9orf84Q5VXU9 1444 aa15.34■□□□□ 0.05
MSH2-201ENST00000233146 PPP1R12AO14974 1030 aaPredicted RBP15.34■□□□□ 0.05
MSH2-201ENST00000233146 FIBPO43427 364 aa15.34■□□□□ 0.05
MSH2-201ENST00000233146 TRDNQ13061 729 aa15.34■□□□□ 0.05
MSH2-201ENST00000233146 STK26Q9P289 416 aa15.34■□□□□ 0.05
MSH2-201ENST00000233146 RGS12O14924 1447 aa15.34■□□□□ 0.05
MSH2-201ENST00000233146 ARID5BQ14865 1188 aa15.33■□□□□ 0.05
MSH2-201ENST00000233146 PIK3R4Q99570 1358 aa15.33■□□□□ 0.04
MSH2-201ENST00000233146 CCZ1BP86790 482 aa15.33■□□□□ 0.04
MSH2-201ENST00000233146 CCZ1P86791 482 aaPredicted RBP15.33■□□□□ 0.04
MSH2-201ENST00000233146 MAP3K11Q16584 847 aa15.33■□□□□ 0.04
MSH2-201ENST00000233146 C16orf71Q8IYS4 520 aaPredicted RBP15.33■□□□□ 0.04
MSH2-201ENST00000233146 FAM43BQ6ZT52 329 aaPredicted RBP15.33■□□□□ 0.04
MSH2-201ENST00000233146 ZNF777Q9ULD5 760 aaPredicted RBP15.33■□□□□ 0.04
MSH2-201ENST00000233146 LRCH2Q5VUJ6 765 aa15.32■□□□□ 0.04
MSH2-201ENST00000233146 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
MSH2-201ENST00000233146 ANO6Q4KMQ2 910 aa15.32■□□□□ 0.04
MSH2-201ENST00000233146 FOXR1Q6PIV2 292 aa15.32■□□□□ 0.04
MSH2-201ENST00000233146 NOL8Q76FK4 1167 aaKnown RBP15.32■□□□□ 0.04
MSH2-201ENST00000233146 UBXN4Q92575 508 aa15.32■□□□□ 0.04
MSH2-201ENST00000233146 ZNF518AQ6AHZ1 1483 aa15.32■□□□□ 0.04
MSH2-201ENST00000233146 DCTPP1Q9H773 170 aa15.32■□□□□ 0.04
MSH2-201ENST00000233146 DISP1Q96F81 1524 aa15.31■□□□□ 0.04
MSH2-201ENST00000233146 CC2D1AQ6P1N0 951 aaPredicted RBP15.31■□□□□ 0.04
MSH2-201ENST00000233146 ATP6V1DQ9Y5K8 247 aa15.31■□□□□ 0.04
MSH2-201ENST00000233146 F13A1P00488 732 aa15.3■□□□□ 0.04
MSH2-201ENST00000233146 SNW1Q13573 536 aaKnown RBP15.3■□□□□ 0.04
MSH2-201ENST00000233146 IL16Q14005 1332 aa15.3■□□□□ 0.04
MSH2-201ENST00000233146 ANAPC15P60006 121 aa15.3■□□□□ 0.04
MSH2-201ENST00000233146 CCDC158Q5M9N0 1113 aa15.3■□□□□ 0.04
MSH2-201ENST00000233146 EFCAB13Q8IY85 973 aa15.3■□□□□ 0.04
MSH2-201ENST00000233146 IL17RAQ96F46 866 aa15.3■□□□□ 0.04
MSH2-201ENST00000233146 CDC42BPAQ5VT25 1732 aa15.3■□□□□ 0.04
MSH2-201ENST00000233146 TPM1P09493 284 aa15.3■□□□□ 0.04
MSH2-201ENST00000233146 OTUD7AQ8TE49 926 aaPredicted RBP15.3■□□□□ 0.04
MSH2-201ENST00000233146 RBM28Q9NW13 759 aaKnown RBP15.3■□□□□ 0.04
MSH2-201ENST00000233146 MKRN1Q9UHC7 482 aaKnown RBP15.3■□□□□ 0.04
MSH2-201ENST00000233146 CCDC34Q96HJ3 373 aa15.29■□□□□ 0.04
MSH2-201ENST00000233146 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
MSH2-201ENST00000233146 PALD1Q9ULE6 856 aa15.29■□□□□ 0.04
MSH2-201ENST00000233146 CCDC69A6NI79 296 aa15.29■□□□□ 0.04
MSH2-201ENST00000233146 STX6O43752 255 aa15.29■□□□□ 0.04
MSH2-201ENST00000233146 MRFAP1L1Q96HT8 127 aa15.29■□□□□ 0.04
MSH2-201ENST00000233146 NUP62CLQ9H1M0 184 aa15.29■□□□□ 0.04
MSH2-201ENST00000233146 SH3BP1Q9Y3L3 701 aa15.29■□□□□ 0.04
MSH2-201ENST00000233146 SARM1Q6SZW1 724 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 TRIM35Q9UPQ4 493 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 TADA3O75528 432 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 C11orf91Q3C1V1 193 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 MORC1Q86VD1 984 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 H3BQF6 201 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 TUBB4AP04350 444 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 SYT1P21579 422 aa15.28■□□□□ 0.04
MSH2-201ENST00000233146 MAP9Q49MG5 647 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms