RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 PHOX2BQ99453 314 aa12.75□□□□□ -0.37
TTC1-201ENST00000231238 TMEM134Q9H6X4 195 aa12.75□□□□□ -0.37
TTC1-201ENST00000231238 SUPT16HQ9Y5B9 1047 aaKnown RBP12.75□□□□□ -0.37
TTC1-201ENST00000231238 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
TTC1-201ENST00000231238 KIF1AQ12756 1690 aa12.75□□□□□ -0.37
TTC1-201ENST00000231238 SHPRHQ149N8 1683 aa12.75□□□□□ -0.37
TTC1-201ENST00000231238 PNPLA6Q8IY17 1366 aa12.74□□□□□ -0.37
TTC1-201ENST00000231238 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
TTC1-201ENST00000231238 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
TTC1-201ENST00000231238 MST1RQ04912 1400 aa12.74□□□□□ -0.37
TTC1-201ENST00000231238 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
TTC1-201ENST00000231238 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
TTC1-201ENST00000231238 LRRC7Q96NW7 1537 aa12.73□□□□□ -0.37
TTC1-201ENST00000231238 KCNH5Q8NCM2 988 aa12.73□□□□□ -0.37
TTC1-201ENST00000231238 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
TTC1-201ENST00000231238 COL3A1P02461 1466 aaPredicted RBP12.73□□□□□ -0.37
TTC1-201ENST00000231238 MAP3K19Q56UN5 1328 aa12.73□□□□□ -0.37
TTC1-201ENST00000231238 HMOX1P09601 288 aa12.72□□□□□ -0.37
TTC1-201ENST00000231238 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
TTC1-201ENST00000231238 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
TTC1-201ENST00000231238 FLT4P35916 1363 aa12.72□□□□□ -0.37
TTC1-201ENST00000231238 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
TTC1-201ENST00000231238 IL13P35225 146 aa12.72□□□□□ -0.37
TTC1-201ENST00000231238 PPP4CP60510 307 aa12.72□□□□□ -0.37
TTC1-201ENST00000231238 NLRP7Q8WX94 980 aa12.72□□□□□ -0.37
TTC1-201ENST00000231238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.38
TTC1-201ENST00000231238 IRF6O14896 467 aa12.71□□□□□ -0.38
TTC1-201ENST00000231238 RNF40O75150 1001 aa12.71□□□□□ -0.38
TTC1-201ENST00000231238 PRKAR2BP31323 418 aa12.71□□□□□ -0.38
TTC1-201ENST00000231238 SLAIN2Q9P270 581 aa12.71□□□□□ -0.38
TTC1-201ENST00000231238 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
TTC1-201ENST00000231238 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
TTC1-201ENST00000231238 E9PSI1 815 aa12.69□□□□□ -0.38
TTC1-201ENST00000231238 ZMYND10O75800 440 aa12.69□□□□□ -0.38
TTC1-201ENST00000231238 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
TTC1-201ENST00000231238 LTV1Q96GA3 475 aaPredicted RBP12.69□□□□□ -0.38
TTC1-201ENST00000231238 SULT6B1Q6IMI4 303 aa12.68□□□□□ -0.38
TTC1-201ENST00000231238 NYAP1Q6ZVC0 841 aa12.68□□□□□ -0.38
TTC1-201ENST00000231238 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
TTC1-201ENST00000231238 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
TTC1-201ENST00000231238 KIF24Q5T7B8 1368 aa12.67□□□□□ -0.38
TTC1-201ENST00000231238 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
TTC1-201ENST00000231238 RIPK4P57078 832 aa12.67□□□□□ -0.38
TTC1-201ENST00000231238 BARGINQ6ZT62 677 aa12.67□□□□□ -0.38
TTC1-201ENST00000231238 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
TTC1-201ENST00000231238 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
TTC1-201ENST00000231238 PLA2G2EQ9NZK7 142 aa12.67□□□□□ -0.38
TTC1-201ENST00000231238 RCAN3Q9UKA8 241 aa12.67□□□□□ -0.38
TTC1-201ENST00000231238 GCP02774 474 aa12.66□□□□□ -0.38
TTC1-201ENST00000231238 HOXC9P31274 260 aa12.66□□□□□ -0.38
TTC1-201ENST00000231238 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
TTC1-201ENST00000231238 IQSEC2Q5JU85 1478 aa12.66□□□□□ -0.38
TTC1-201ENST00000231238 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
TTC1-201ENST00000231238 IRX6P78412 446 aaPredicted RBP12.65□□□□□ -0.38
TTC1-201ENST00000231238 SLFN5Q08AF3 891 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 LMOD3Q0VAK6 560 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 CCDC102AQ96A19 550 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 MYH16Q9H6N6 1097 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 ZNF521Q96K83 1311 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 ARHGEF10O15013 1369 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 APLP1P51693 650 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
TTC1-201ENST00000231238 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
TTC1-201ENST00000231238 SLC10A3P09131 477 aa12.64□□□□□ -0.39
TTC1-201ENST00000231238 TNS3Q68CZ2 1445 aa12.64□□□□□ -0.39
TTC1-201ENST00000231238 IP6K1Q92551 441 aa12.64□□□□□ -0.39
TTC1-201ENST00000231238 XIRP1Q702N8 1843 aaKnown RBP12.63□□□□□ -0.39
TTC1-201ENST00000231238 ZC3H6P61129 1189 aaKnown RBP12.63□□□□□ -0.39
TTC1-201ENST00000231238 DUSP27Q5VZP5 1158 aa12.63□□□□□ -0.39
TTC1-201ENST00000231238 USP54Q70EL1 1684 aa12.63□□□□□ -0.39
TTC1-201ENST00000231238 USP19O94966 1318 aa12.63□□□□□ -0.39
TTC1-201ENST00000231238 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
TTC1-201ENST00000231238 AEBP1Q8IUX7 1158 aa12.62□□□□□ -0.39
TTC1-201ENST00000231238 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
TTC1-201ENST00000231238 TRPM3Q9HCF6 1732 aaPredicted RBP12.61□□□□□ -0.39
TTC1-201ENST00000231238 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.61□□□□□ -0.39
TTC1-201ENST00000231238 PHACTR3Q96KR7 559 aa12.61□□□□□ -0.39
TTC1-201ENST00000231238 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
TTC1-201ENST00000231238 LAS1LQ9Y4W2 734 aaKnown RBP12.61□□□□□ -0.39
TTC1-201ENST00000231238 NFAT5O94916 1531 aa12.6□□□□□ -0.39
TTC1-201ENST00000231238 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
TTC1-201ENST00000231238 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
TTC1-201ENST00000231238 SLIT3O75094 1523 aa12.6□□□□□ -0.39
TTC1-201ENST00000231238 ITGBL1O95965 494 aaPredicted RBP12.59□□□□□ -0.39
TTC1-201ENST00000231238 CSB-PGBD3P0DP91 1061 aa12.59□□□□□ -0.39
TTC1-201ENST00000231238 SLC4A3P48751 1232 aa12.59□□□□□ -0.39
TTC1-201ENST00000231238 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
TTC1-201ENST00000231238 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
TTC1-201ENST00000231238 PXDNQ92626 1479 aa12.59□□□□□ -0.39
TTC1-201ENST00000231238 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
TTC1-201ENST00000231238 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
TTC1-201ENST00000231238 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
TTC1-201ENST00000231238 KRI1Q8N9T8 703 aaKnown RBP12.59□□□□□ -0.39
TTC1-201ENST00000231238 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
TTC1-201ENST00000231238 ANKRD24Q8TF21 1146 aa12.59□□□□□ -0.39
TTC1-201ENST00000231238 IL16Q14005 1332 aa12.58□□□□□ -0.39
TTC1-201ENST00000231238 LTN1O94822 1766 aa12.58□□□□□ -0.4
TTC1-201ENST00000231238 ERICH6BQ5W0A0 696 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms