RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 TTC14Q96N46 770 aa16.83■□□□□ 0.29
SCNN1A-201ENST00000228916 PRDM10Q9NQV6 1147 aa16.83■□□□□ 0.29
SCNN1A-201ENST00000228916 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
SCNN1A-201ENST00000228916 NUTM2FA1L443 756 aa16.83■□□□□ 0.28
SCNN1A-201ENST00000228916 SOX12O15370 315 aa16.83■□□□□ 0.28
SCNN1A-201ENST00000228916 ACEP12821 1306 aa16.82■□□□□ 0.28
SCNN1A-201ENST00000228916 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
SCNN1A-201ENST00000228916 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
SCNN1A-201ENST00000228916 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
SCNN1A-201ENST00000228916 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
SCNN1A-201ENST00000228916 RAD50Q92878 1312 aa16.82■□□□□ 0.28
SCNN1A-201ENST00000228916 MAP3K19Q56UN5 1328 aa16.82■□□□□ 0.28
SCNN1A-201ENST00000228916 STX6O43752 255 aa16.81■□□□□ 0.28
SCNN1A-201ENST00000228916 MTHFSDQ2M296 383 aaKnown RBP16.81■□□□□ 0.28
SCNN1A-201ENST00000228916 KIAA1524Q8TCG1 905 aa16.81■□□□□ 0.28
SCNN1A-201ENST00000228916 SYT1P21579 422 aa16.81■□□□□ 0.28
SCNN1A-201ENST00000228916 NALCNQ8IZF0 1738 aa16.81■□□□□ 0.28
SCNN1A-201ENST00000228916 F13A1P00488 732 aa16.81■□□□□ 0.28
SCNN1A-201ENST00000228916 BCL2L12Q9HB09 334 aa16.8■□□□□ 0.28
SCNN1A-201ENST00000228916 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
SCNN1A-201ENST00000228916 TSPOAP1O95153 1857 aa16.8■□□□□ 0.28
SCNN1A-201ENST00000228916 N4BP2Q86UW6 1770 aaPredicted RBP16.8■□□□□ 0.28
SCNN1A-201ENST00000228916 FLIIQ13045 1269 aa16.8■□□□□ 0.28
SCNN1A-201ENST00000228916 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.8■□□□□ 0.28
SCNN1A-201ENST00000228916 ATP6V1DQ9Y5K8 247 aa16.8■□□□□ 0.28
SCNN1A-201ENST00000228916 SGSM2O43147 1006 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 AP5Z1O43299 807 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 STK31Q9BXU1 1019 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 KCNF1Q9H3M0 494 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 TPM3P06753 285 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 AK2P54819 239 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 FAM208AQ9UK61 1670 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-201ENST00000228916 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
SCNN1A-201ENST00000228916 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
SCNN1A-201ENST00000228916 USP6P35125 1406 aa16.78■□□□□ 0.28
SCNN1A-201ENST00000228916 LRRFIP2Q9Y608 721 aaKnown RBP16.78■□□□□ 0.28
SCNN1A-201ENST00000228916 GIMAP6Q6P9H5 292 aa16.78■□□□□ 0.28
SCNN1A-201ENST00000228916 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
SCNN1A-201ENST00000228916 DIAPH3Q9NSV4 1193 aa16.78■□□□□ 0.28
SCNN1A-201ENST00000228916 USP31Q70CQ4 1352 aa16.78■□□□□ 0.28
SCNN1A-201ENST00000228916 FIBPO43427 364 aa16.77■□□□□ 0.28
SCNN1A-201ENST00000228916 PPP4R3BQ5MIZ7 849 aa16.77■□□□□ 0.28
SCNN1A-201ENST00000228916 PYCARDQ9ULZ3 195 aa16.77■□□□□ 0.28
SCNN1A-201ENST00000228916 ATP2B3Q16720 1220 aa16.77■□□□□ 0.27
SCNN1A-201ENST00000228916 PI4K2BQ8TCG2 481 aa16.77■□□□□ 0.27
SCNN1A-201ENST00000228916 SSH3Q8TE77 659 aa16.77■□□□□ 0.27
SCNN1A-201ENST00000228916 RTF1Q92541 710 aaKnown RBP16.77■□□□□ 0.27
SCNN1A-201ENST00000228916 GTPBP4Q9BZE4 634 aaKnown RBP16.77■□□□□ 0.27
SCNN1A-201ENST00000228916 SMC3Q9UQE7 1217 aa16.77■□□□□ 0.27
SCNN1A-201ENST00000228916 RASEFQ8IZ41 740 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 IL1RAPL2Q9NP60 686 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 ZHX1Q9UKY1 873 aaPredicted RBP16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 PLEKHG3A1L390 1219 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 CBX1P83916 185 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 CCDC30Q5VVM6 783 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 ANKRD7Q92527 254 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 FMN2Q9NZ56 1722 aa16.76■□□□□ 0.27
SCNN1A-201ENST00000228916 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
SCNN1A-201ENST00000228916 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
SCNN1A-201ENST00000228916 RIOK3O14730 519 aaKnown RBP16.75■□□□□ 0.27
SCNN1A-201ENST00000228916 CTIFO43310 598 aaKnown RBP16.75■□□□□ 0.27
SCNN1A-201ENST00000228916 CYB5RLQ6IPT4 315 aa16.75■□□□□ 0.27
SCNN1A-201ENST00000228916 NUTM1Q86Y26 1132 aa16.75■□□□□ 0.27
SCNN1A-201ENST00000228916 MTMR6Q9Y217 621 aa16.75■□□□□ 0.27
SCNN1A-201ENST00000228916 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
SCNN1A-201ENST00000228916 CEP170BQ9Y4F5 1589 aaPredicted RBP16.74■□□□□ 0.27
SCNN1A-201ENST00000228916 KDRP35968 1356 aa16.74■□□□□ 0.27
SCNN1A-201ENST00000228916 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
SCNN1A-201ENST00000228916 CRYBG1Q9Y4K1 1723 aa16.74■□□□□ 0.27
SCNN1A-201ENST00000228916 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
SCNN1A-201ENST00000228916 DNM1Q05193 864 aaKnown RBP16.74■□□□□ 0.27
SCNN1A-201ENST00000228916 CHAF1AQ13111 956 aaPredicted RBP16.74■□□□□ 0.27
SCNN1A-201ENST00000228916 DIP2BQ9P265 1576 aa16.73■□□□□ 0.27
SCNN1A-201ENST00000228916 GOLGA6L6A8MZA4 724 aa16.73■□□□□ 0.27
SCNN1A-201ENST00000228916 PLCB2Q00722 1185 aa16.73■□□□□ 0.27
SCNN1A-201ENST00000228916 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
SCNN1A-201ENST00000228916 LARGE1O95461 756 aa16.73■□□□□ 0.27
SCNN1A-201ENST00000228916 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
SCNN1A-201ENST00000228916 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
SCNN1A-201ENST00000228916 MAP4K4O95819 1239 aaPredicted RBP16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 CCDC192P0DO97 292 aa16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 POLA2Q14181 598 aa16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 EYA1Q99502 592 aa16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 ADAMTS13Q76LX8 1427 aa16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 GJB2P29033 226 aa16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 RHPN1Q8TCX5 695 aa16.72■□□□□ 0.27
SCNN1A-201ENST00000228916 HDGFP51858 240 aaKnown RBP16.71■□□□□ 0.27
SCNN1A-201ENST00000228916 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.27
SCNN1A-201ENST00000228916 TMEM2Q9UHN6 1383 aa16.71■□□□□ 0.27
SCNN1A-201ENST00000228916 HTATSF1O43719 755 aaKnown RBP16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 KIF20AO95235 890 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms