RNA–Protein interactions for RNA: ENST00000223609.10

PRUNE2-201, Transcript of prune homolog 2, humanhuman

TSL 2 BASIC

Gene PRUNE2, Length 2,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-201ENST00000223609 PODXL2Q9NZ53 605 aa6.96□□□□□ -1.29
PRUNE2-201ENST00000223609 TFCP2L1Q9NZI6 479 aa6.96□□□□□ -1.29
PRUNE2-201ENST00000223609 KCPQ6ZWJ8 1503 aa6.96□□□□□ -1.29
PRUNE2-201ENST00000223609 EIF5BO60841 1220 aaKnown RBP6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 PTGER2P43116 358 aa6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 ITPK1Q13572 414 aa6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 NFATC2IPQ8NCF5 419 aa6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 LINC00116Q8NCU8 138 aa6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 PHACTR3Q96KR7 559 aa6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 MTFR1LQ9H019 292 aa6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 SLC52A2Q9HAB3 445 aa6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 LGR6Q9HBX8 967 aa6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 MYBBP1AQ9BQG0 1328 aaKnown RBP6.96□□□□□ -1.3
PRUNE2-201ENST00000223609 GABBR2O75899 941 aa6.95□□□□□ -1.3
PRUNE2-201ENST00000223609 HMGB2P26583 209 aaKnown RBP6.95□□□□□ -1.3
PRUNE2-201ENST00000223609 ATP6V1AP38606 617 aa6.95□□□□□ -1.3
PRUNE2-201ENST00000223609 SLC4A9Q96Q91 983 aa6.95□□□□□ -1.3
PRUNE2-201ENST00000223609 DLG5Q8TDM6 1919 aa6.95□□□□□ -1.3
PRUNE2-201ENST00000223609 FCHSD2O94868 740 aa6.95□□□□□ -1.3
PRUNE2-201ENST00000223609 C4AP0C0L4 1744 aa6.95□□□□□ -1.3
PRUNE2-201ENST00000223609 GNAT3A8MTJ3 354 aa6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 AMIGO3Q86WK7 504 aa6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 AK7Q96M32 723 aa6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 CEMIPQ8WUJ3 1361 aa6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 MYH14Q7Z406 1995 aaKnown RBP6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 TIE1P35590 1138 aa6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 COL23A1Q86Y22 540 aaPredicted RBP6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 SLC16A10Q8TF71 515 aa6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 PPP1R1BQ9UD71 204 aaPredicted RBP6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 EVX2Q03828 476 aa6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 PRKRIP1Q9H875 184 aaPredicted RBP6.94□□□□□ -1.3
PRUNE2-201ENST00000223609 CNTNAP4Q9C0A0 1308 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 SSFA2P28290 1259 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 FLAD1Q8NFF5 587 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 IL17REQ8NFR9 667 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 PHF12Q96QT6 1004 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 GNPATO15228 680 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 PHF14O94880 888 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 SLC39A6Q13433 755 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 PLEKHF1Q96S99 279 aa6.93□□□□□ -1.3
PRUNE2-201ENST00000223609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.92□□□□□ -1.3
PRUNE2-201ENST00000223609 ZNF316A6NFI3 1004 aaPredicted RBP6.92□□□□□ -1.3
PRUNE2-201ENST00000223609 TEFQ10587 303 aa6.92□□□□□ -1.3
PRUNE2-201ENST00000223609 SMIM5Q71RC9 77 aa6.92□□□□□ -1.3
PRUNE2-201ENST00000223609 PCDHB13Q9Y5F0 798 aa6.92□□□□□ -1.3
PRUNE2-201ENST00000223609 GTF3C3Q9Y5Q9 886 aa6.92□□□□□ -1.3
PRUNE2-201ENST00000223609 KDM3BQ7LBC6 1761 aa6.92□□□□□ -1.3
PRUNE2-201ENST00000223609 POLD1P28340 1107 aa6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 PLCB2Q00722 1185 aa6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 RC3H1Q5TC82 1133 aaKnown RBP6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 MCM10Q7L590 875 aa6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 MAPK8IP3Q9UPT6 1336 aa6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 HTATSF1O43719 755 aaKnown RBP6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 NEFMP07197 916 aa6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 CRKLP46109 303 aaKnown RBP6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 DNAJC10Q8IXB1 793 aa6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 TTC5Q8N0Z6 440 aa6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 RTF1Q92541 710 aaKnown RBP6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 FHDC1Q9C0D6 1143 aaPredicted RBP6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 RTCBQ9Y3I0 505 aaKnown RBP6.91□□□□□ -1.3
PRUNE2-201ENST00000223609 LAMB4A4D0S4 1761 aa6.9□□□□□ -1.3
PRUNE2-201ENST00000223609 DCTN1Q14203 1278 aa6.9□□□□□ -1.3
PRUNE2-201ENST00000223609 NFE2L2Q16236 605 aa6.9□□□□□ -1.3
PRUNE2-201ENST00000223609 ZNF790Q6PG37 636 aa6.9□□□□□ -1.3
PRUNE2-201ENST00000223609 VSIG10Q8N0Z9 540 aa6.9□□□□□ -1.3
PRUNE2-201ENST00000223609 PNNQ9H307 717 aaKnown RBP6.9□□□□□ -1.3
PRUNE2-201ENST00000223609 HEG1Q9ULI3 1381 aa6.9□□□□□ -1.3
PRUNE2-201ENST00000223609 MAP3K13O43283 966 aa6.9□□□□□ -1.31
PRUNE2-201ENST00000223609 RPS6KA4O75676 772 aa6.9□□□□□ -1.31
PRUNE2-201ENST00000223609 ECM2O94769 699 aaPredicted RBP6.9□□□□□ -1.31
PRUNE2-201ENST00000223609 BTBD11A6QL63 1104 aa6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 CYP19A1P11511 503 aaPredicted RBP6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 ZNF496Q96IT1 587 aaPredicted RBP6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 SYT17Q9BSW7 474 aa6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 CCDC87Q9NVE4 849 aa6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 SCN7AQ01118 1682 aa6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 RIOK3O14730 519 aaKnown RBP6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 TRAPPC3LQ5T215 181 aa6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 INTS5Q6P9B9 1019 aaKnown RBP6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 MS4A3Q96HJ5 214 aa6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 DCBLD2Q96PD2 775 aa6.89□□□□□ -1.31
PRUNE2-201ENST00000223609 UTRNP46939 3433 aa6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 SOS1Q07889 1333 aaPredicted RBP6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 KCNQ3O43525 872 aa6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 PDAP1Q13442 181 aaKnown RBP6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 WDR43Q15061 677 aaKnown RBP eCLIP6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 ARHGEF1Q92888 912 aaKnown RBP6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 FMNL2Q96PY5 1086 aa6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 ZBTB1Q9Y2K1 713 aa6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 COL15A1P39059 1388 aa6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 GOLGB1Q14789 3259 aaKnown RBP6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 KIF13BQ9NQT8 1826 aa6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 PYGBP11216 843 aa6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 CCDC146Q8IYE0 955 aa6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 USP42Q9H9J4 1324 aaKnown RBP6.88□□□□□ -1.31
PRUNE2-201ENST00000223609 BCORQ6W2J9 1755 aa6.87□□□□□ -1.31
PRUNE2-201ENST00000223609 KIAA1551Q9HCM1 1747 aa6.87□□□□□ -1.31
PRUNE2-201ENST00000223609 RFC4P35249 363 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms