RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 RASEFQ8IZ41 740 aa20.69■□□□□ 0.9
H2AFV-201ENST00000222690 CNTROBQ8N137 903 aa20.69■□□□□ 0.9
H2AFV-201ENST00000222690 SPC24Q8NBT2 197 aa20.68■□□□□ 0.9
H2AFV-201ENST00000222690 STX6O43752 255 aa20.68■□□□□ 0.9
H2AFV-201ENST00000222690 MCM5P33992 734 aa20.68■□□□□ 0.9
H2AFV-201ENST00000222690 SYT1P21579 422 aa20.68■□□□□ 0.9
H2AFV-201ENST00000222690 SOS1Q07889 1333 aaPredicted RBP20.68■□□□□ 0.9
H2AFV-201ENST00000222690 HSPA4P34932 840 aa20.67■□□□□ 0.9
H2AFV-201ENST00000222690 CCDC183Q5T5S1 534 aa20.67■□□□□ 0.9
H2AFV-201ENST00000222690 SNX14Q9Y5W7 946 aa20.67■□□□□ 0.9
H2AFV-201ENST00000222690 NBPF7P0C2Y1 421 aaPredicted RBP20.67■□□□□ 0.9
H2AFV-201ENST00000222690 TAF7Q15545 349 aaPredicted RBP20.67■□□□□ 0.9
H2AFV-201ENST00000222690 ZSCAN22P10073 491 aaPredicted RBP20.67■□□□□ 0.9
H2AFV-201ENST00000222690 JAKMIP1Q96N16 626 aaKnown RBP20.67■□□□□ 0.9
H2AFV-201ENST00000222690 FERMT3Q86UX7 667 aa20.66■□□□□ 0.9
H2AFV-201ENST00000222690 SALL3Q9BXA9 1300 aa20.66■□□□□ 0.9
H2AFV-201ENST00000222690 PRPF40BQ6NWY9 871 aaKnown RBP20.66■□□□□ 0.9
H2AFV-201ENST00000222690 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.66■□□□□ 0.9
H2AFV-201ENST00000222690 IL17REQ8NFR9 667 aa20.66■□□□□ 0.9
H2AFV-201ENST00000222690 LIMCH1Q9UPQ0 1083 aa20.66■□□□□ 0.9
H2AFV-201ENST00000222690 DLC1Q96QB1 1528 aa20.66■□□□□ 0.9
H2AFV-201ENST00000222690 PRDM10Q9NQV6 1147 aa20.65■□□□□ 0.9
H2AFV-201ENST00000222690 DNM1Q05193 864 aaKnown RBP20.65■□□□□ 0.9
H2AFV-201ENST00000222690 STAP2Q9UGK3 403 aa20.65■□□□□ 0.9
H2AFV-201ENST00000222690 PI4KAP2A4QPH2 592 aa20.64■□□□□ 0.9
H2AFV-201ENST00000222690 PI4KAP1Q8N8J0 262 aa20.64■□□□□ 0.9
H2AFV-201ENST00000222690 KIF1BPQ96EK5 621 aa20.64■□□□□ 0.9
H2AFV-201ENST00000222690 FLT4P35916 1363 aa20.64■□□□□ 0.89
H2AFV-201ENST00000222690 SGSM2O43147 1006 aa20.64■□□□□ 0.89
H2AFV-201ENST00000222690 NECAB1Q8N987 351 aa20.64■□□□□ 0.89
H2AFV-201ENST00000222690 GJB2P29033 226 aa20.63■□□□□ 0.89
H2AFV-201ENST00000222690 TERF1P54274 439 aa20.63■□□□□ 0.89
H2AFV-201ENST00000222690 LARGE1O95461 756 aa20.63■□□□□ 0.89
H2AFV-201ENST00000222690 RUFY3Q7L099 469 aa20.63■□□□□ 0.89
H2AFV-201ENST00000222690 ATP6V1DQ9Y5K8 247 aa20.63■□□□□ 0.89
H2AFV-201ENST00000222690 TCEANC2Q96MN5 208 aa20.63■□□□□ 0.89
H2AFV-201ENST00000222690 RAD50Q92878 1312 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 DYNC1I1O14576 645 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 ABTB2Q8N961 1025 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 FAM184AQ8NB25 1140 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 PLEKHG3A1L390 1219 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 MAP7D2Q96T17 732 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 CHPF2Q9P2E5 772 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 USP6P35125 1406 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 F13A1P00488 732 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 UBE2HP62256 183 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 NOLC1Q14978 699 aaKnown RBP eCLIP20.62■□□□□ 0.891e-22■■■□□ 19
H2AFV-201ENST00000222690 CAMK4Q16566 473 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 PDRG1Q9NUG6 133 aa20.62■□□□□ 0.89
H2AFV-201ENST00000222690 C9orf78Q9NZ63 289 aaPredicted RBP20.62■□□□□ 0.89
H2AFV-201ENST00000222690 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.61■□□□□ 0.89
H2AFV-201ENST00000222690 CLASRPQ8N2M8 674 aaKnown RBP20.61■□□□□ 0.89
H2AFV-201ENST00000222690 SSH3Q8TE77 659 aa20.61■□□□□ 0.89
H2AFV-201ENST00000222690 AMOTL2Q9Y2J4 779 aa20.61■□□□□ 0.89
H2AFV-201ENST00000222690 RICTORQ6R327 1708 aa20.61■□□□□ 0.89
H2AFV-201ENST00000222690 IFIT2P09913 472 aaKnown RBP20.61■□□□□ 0.89
H2AFV-201ENST00000222690 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
H2AFV-201ENST00000222690 FAM173BQ6P4H8 233 aa20.61■□□□□ 0.89
H2AFV-201ENST00000222690 PA2G4Q9UQ80 394 aaKnown RBP20.61■□□□□ 0.89
H2AFV-201ENST00000222690 ARHGEF10O15013 1369 aa20.6■□□□□ 0.89
H2AFV-201ENST00000222690 GOLGA6L4A6NEF3 574 aa20.6■□□□□ 0.89
H2AFV-201ENST00000222690 RAB11FIP3O75154 756 aa20.6■□□□□ 0.89
H2AFV-201ENST00000222690 LTKP29376 864 aa20.6■□□□□ 0.89
H2AFV-201ENST00000222690 PI4K2BQ8TCG2 481 aa20.6■□□□□ 0.89
H2AFV-201ENST00000222690 ADCK5Q3MIX3 580 aa20.59■□□□□ 0.89
H2AFV-201ENST00000222690 BCL11BQ9C0K0 894 aaPredicted RBP20.59■□□□□ 0.89
H2AFV-201ENST00000222690 PTH1RQ03431 593 aa20.59■□□□□ 0.89
H2AFV-201ENST00000222690 DRC7Q8IY82 874 aa20.59■□□□□ 0.89
H2AFV-201ENST00000222690 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
H2AFV-201ENST00000222690 OVOS2A0A0J9YW53 1432 aa20.58■□□□□ 0.89
H2AFV-201ENST00000222690 OVOS2Q6IE36 1432 aa20.58■□□□□ 0.89
H2AFV-201ENST00000222690 DNAAF4Q8WXU2 420 aa20.58■□□□□ 0.89
H2AFV-201ENST00000222690 LSG1Q9H089 658 aaKnown RBP20.58■□□□□ 0.89
H2AFV-201ENST00000222690 CYP46A1Q9Y6A2 500 aa20.58■□□□□ 0.89
H2AFV-201ENST00000222690 SBNO1A3KN83 1393 aa20.58■□□□□ 0.89
H2AFV-201ENST00000222690 RPAP1Q9BWH6 1393 aaPredicted RBP20.58■□□□□ 0.89
H2AFV-201ENST00000222690 TEFQ10587 303 aa20.58■□□□□ 0.89
H2AFV-201ENST00000222690 RUFY2Q8WXA3 655 aa20.58■□□□□ 0.89
H2AFV-201ENST00000222690 ZKSCAN1P17029 563 aaPredicted RBP20.58■□□□□ 0.88
H2AFV-201ENST00000222690 STK3Q13188 491 aa20.58■□□□□ 0.88
H2AFV-201ENST00000222690 IGSF1Q8N6C5 1336 aa20.57■□□□□ 0.88
H2AFV-201ENST00000222690 SSH2Q76I76 1423 aa20.57■□□□□ 0.88
H2AFV-201ENST00000222690 KCNQ3O43525 872 aa20.57■□□□□ 0.88
H2AFV-201ENST00000222690 SIL1Q9H173 461 aa20.57■□□□□ 0.88
H2AFV-201ENST00000222690 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
H2AFV-201ENST00000222690 HOXC9P31274 260 aa20.56■□□□□ 0.88
H2AFV-201ENST00000222690 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
H2AFV-201ENST00000222690 LARP1BQ659C4 914 aaKnown RBP20.56■□□□□ 0.88
H2AFV-201ENST00000222690 LGR6Q9HBX8 967 aa20.56■□□□□ 0.88
H2AFV-201ENST00000222690 GLRX3O76003 335 aaKnown RBP20.56■□□□□ 0.88
H2AFV-201ENST00000222690 AACSQ86V21 672 aa20.56■□□□□ 0.88
H2AFV-201ENST00000222690 CKAP2LQ8IYA6 745 aa20.56■□□□□ 0.88
H2AFV-201ENST00000222690 RIMS1Q86UR5 1692 aaKnown RBP20.55■□□□□ 0.88
H2AFV-201ENST00000222690 KDM4AO75164 1064 aa20.55■□□□□ 0.88
H2AFV-201ENST00000222690 LETM1O95202 739 aaPredicted RBP20.55■□□□□ 0.88
H2AFV-201ENST00000222690 UVSSAQ2YD98 709 aa20.55■□□□□ 0.88
H2AFV-201ENST00000222690 PIBF1Q8WXW3 757 aa20.55■□□□□ 0.88
H2AFV-201ENST00000222690 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
H2AFV-201ENST00000222690 TCHHQ07283 1943 aa20.55■□□□□ 0.88
H2AFV-201ENST00000222690 SIRT1Q96EB6 747 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms