RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 AMPHP49418 695 aa16.47■□□□□ 0.23
GABPB1-201ENST00000220429 FEZ2Q9UHY8 353 aaPredicted RBP16.47■□□□□ 0.23
GABPB1-201ENST00000220429 CRB1P82279 1406 aa16.47■□□□□ 0.23
GABPB1-201ENST00000220429 FOXO3O43524 673 aa16.47■□□□□ 0.23
GABPB1-201ENST00000220429 MTHFSDQ2M296 383 aaKnown RBP16.47■□□□□ 0.23
GABPB1-201ENST00000220429 IGSF1Q8N6C5 1336 aa16.47■□□□□ 0.23
GABPB1-201ENST00000220429 EYA1Q99502 592 aa16.47■□□□□ 0.23
GABPB1-201ENST00000220429 C1orf115Q9H7X2 142 aa16.47■□□□□ 0.23
GABPB1-201ENST00000220429 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
GABPB1-201ENST00000220429 FAM193AP78312 1265 aa16.46■□□□□ 0.22
GABPB1-201ENST00000220429 NUCB1Q02818 461 aa16.46■□□□□ 0.22
GABPB1-201ENST00000220429 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.22
GABPB1-201ENST00000220429 FKBP5Q13451 457 aaPredicted RBP16.45■□□□□ 0.22
GABPB1-201ENST00000220429 ANKLE2Q86XL3 938 aa16.45■□□□□ 0.22
GABPB1-201ENST00000220429 SETD1BQ9UPS6 1966 aaKnown RBP16.45■□□□□ 0.22
GABPB1-201ENST00000220429 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
GABPB1-201ENST00000220429 LOC102724159A0A0B4J2E5 919 aa16.45■□□□□ 0.22
GABPB1-201ENST00000220429 TNNT3P45378 269 aaPredicted RBP16.45■□□□□ 0.22
GABPB1-201ENST00000220429 PWP2Q15269 919 aaKnown RBP16.45■□□□□ 0.22
GABPB1-201ENST00000220429 DIAPH3Q9NSV4 1193 aa16.44■□□□□ 0.22
GABPB1-201ENST00000220429 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
GABPB1-201ENST00000220429 ERICH4A6NGS2 130 aa16.43■□□□□ 0.22
GABPB1-201ENST00000220429 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
GABPB1-201ENST00000220429 DDX41Q9UJV9 622 aaKnown RBP16.43■□□□□ 0.22
GABPB1-201ENST00000220429 CTIFO43310 598 aaKnown RBP16.43■□□□□ 0.22
GABPB1-201ENST00000220429 HOXC9P31274 260 aa16.43■□□□□ 0.22
GABPB1-201ENST00000220429 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
GABPB1-201ENST00000220429 LNPKQ9C0E8 428 aa16.43■□□□□ 0.22
GABPB1-201ENST00000220429 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
GABPB1-201ENST00000220429 ADAMTSL3P82987 1691 aa16.43■□□□□ 0.22
GABPB1-201ENST00000220429 NWD1Q149M9 1564 aa16.42■□□□□ 0.22
GABPB1-201ENST00000220429 RGS12O14924 1447 aa16.42■□□□□ 0.22
GABPB1-201ENST00000220429 RIOK3O14730 519 aaKnown RBP16.42■□□□□ 0.22
GABPB1-201ENST00000220429 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
GABPB1-201ENST00000220429 RBM33Q96EV2 1170 aaKnown RBP16.42■□□□□ 0.22
GABPB1-201ENST00000220429 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
GABPB1-201ENST00000220429 CHD1LQ86WJ1 897 aa16.42■□□□□ 0.22
GABPB1-201ENST00000220429 SPTLC3Q9NUV7 552 aa16.42■□□□□ 0.22
GABPB1-201ENST00000220429 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
GABPB1-201ENST00000220429 MORC2Q9Y6X9 1032 aaPredicted RBP16.42■□□□□ 0.22
GABPB1-201ENST00000220429 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
GABPB1-201ENST00000220429 MCTP1Q6DN14 999 aa16.41■□□□□ 0.22
GABPB1-201ENST00000220429 PHF8Q9UPP1 1060 aa16.41■□□□□ 0.22
GABPB1-201ENST00000220429 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
GABPB1-201ENST00000220429 CHAF1AQ13111 956 aaPredicted RBP16.41■□□□□ 0.22
GABPB1-201ENST00000220429 LTN1O94822 1766 aa16.41■□□□□ 0.22
GABPB1-201ENST00000220429 RTF1Q92541 710 aaKnown RBP16.4■□□□□ 0.22
GABPB1-201ENST00000220429 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
GABPB1-201ENST00000220429 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
GABPB1-201ENST00000220429 LMBRD1Q9NUN5 540 aa16.4■□□□□ 0.22
GABPB1-201ENST00000220429 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.22
GABPB1-201ENST00000220429 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
GABPB1-201ENST00000220429 C17orf53Q8N3J3 647 aaPredicted RBP16.39■□□□□ 0.21
GABPB1-201ENST00000220429 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
GABPB1-201ENST00000220429 LRRC37A3O60309 1634 aa16.39■□□□□ 0.21
GABPB1-201ENST00000220429 PATL2C9JE40 543 aaKnown RBP16.39■□□□□ 0.21
GABPB1-201ENST00000220429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.39■□□□□ 0.21
GABPB1-201ENST00000220429 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
GABPB1-201ENST00000220429 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
GABPB1-201ENST00000220429 ADGRL3Q9HAR2 1447 aa16.37■□□□□ 0.21
GABPB1-201ENST00000220429 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
GABPB1-201ENST00000220429 C14orf37Q86TY3 774 aa16.37■□□□□ 0.21
GABPB1-201ENST00000220429 RNF214Q8ND24 703 aa16.37■□□□□ 0.21
GABPB1-201ENST00000220429 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
GABPB1-201ENST00000220429 RSPH14Q9UHP6 348 aa16.37■□□□□ 0.21
GABPB1-201ENST00000220429 GTF2A1P52655 376 aaPredicted RBP16.37■□□□□ 0.21
GABPB1-201ENST00000220429 NCBP1Q09161 790 aaKnown RBP16.37■□□□□ 0.21
GABPB1-201ENST00000220429 NOP2P46087 812 aaKnown RBP16.36■□□□□ 0.21
GABPB1-201ENST00000220429 KRT222Q8N1A0 295 aa16.36■□□□□ 0.21
GABPB1-201ENST00000220429 LTV1Q96GA3 475 aaPredicted RBP16.36■□□□□ 0.21
GABPB1-201ENST00000220429 PTPRCP08575 1304 aa16.36■□□□□ 0.21
GABPB1-201ENST00000220429 SYCE3A1L190 88 aa16.36■□□□□ 0.21
GABPB1-201ENST00000220429 K7ELQ4 463 aaPredicted RBP16.35■□□□□ 0.21
GABPB1-201ENST00000220429 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
GABPB1-201ENST00000220429 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
GABPB1-201ENST00000220429 NFAT5O94916 1531 aa16.35■□□□□ 0.21
GABPB1-201ENST00000220429 RAD51AP2Q09MP3 1159 aa16.35■□□□□ 0.21
GABPB1-201ENST00000220429 MYCBPQ99417 103 aaPredicted RBP16.35■□□□□ 0.21
GABPB1-201ENST00000220429 RTL1A6NKG5 1358 aa16.35■□□□□ 0.21
GABPB1-201ENST00000220429 ATP10DQ9P241 1426 aa16.34■□□□□ 0.21
GABPB1-201ENST00000220429 MSH6P52701 1360 aa16.34■□□□□ 0.21
GABPB1-201ENST00000220429 SYCP1Q15431 976 aa16.34■□□□□ 0.21
GABPB1-201ENST00000220429 CREBRFQ8IUR6 639 aa16.34■□□□□ 0.21
GABPB1-201ENST00000220429 MPNDQ8N594 471 aa16.34■□□□□ 0.21
GABPB1-201ENST00000220429 KIF18AQ8NI77 898 aa16.34■□□□□ 0.21
GABPB1-201ENST00000220429 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
GABPB1-201ENST00000220429 HNRNPH2P55795 449 aaKnown RBP16.34■□□□□ 0.21
GABPB1-201ENST00000220429 TTC12Q9H892 705 aaPredicted RBP16.34■□□□□ 0.21
GABPB1-201ENST00000220429 NPHP4O75161 1426 aaPredicted RBP16.34■□□□□ 0.21
GABPB1-201ENST00000220429 ESCO1Q5FWF5 840 aa16.33■□□□□ 0.21
GABPB1-201ENST00000220429 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.21
GABPB1-201ENST00000220429 GPT2Q8TD30 523 aa16.33■□□□□ 0.21
GABPB1-201ENST00000220429 G2E3Q7L622 706 aa16.33■□□□□ 0.2
GABPB1-201ENST00000220429 CARD10Q9BWT7 1032 aa16.33■□□□□ 0.2
GABPB1-201ENST00000220429 DHX16O60231 1041 aaKnown RBP16.32■□□□□ 0.2
GABPB1-201ENST00000220429 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 BANK1Q8NDB2 785 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 CACNA1FO60840 1977 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 MAP3K5Q99683 1374 aa16.32■□□□□ 0.2
GABPB1-201ENST00000220429 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms