RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Q8C6G1 249 aa18.22■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Fam122aQ9DB52 284 aa18.22■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Itgb4A2A863 1818 aa18.21■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Lama4P97927 1816 aa18.21■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Tnnt1O88346 262 aa18.21■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Lmnb1P14733 588 aaKnown RBP18.2■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Esco1Q69Z69 843 aa18.2■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Slc39a6Q8C145 765 aa18.2■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Pde3aQ9Z0X4 1141 aa18.2■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Col1a2Q01149 1372 aa18.2■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Prdm11A2AGX3 565 aa18.19■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Pibf1E9Q6K3 756 aa18.19■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Snai1Q02085 264 aa18.19■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Slf2Q6P9P0 1278 aa18.19■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Tango6Q8C3S2 1079 aa18.19■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Pdia6Q922R8 440 aaKnown RBP18.19■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Uhrf1bp1B2KF50 1429 aa18.18■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Usp19Q3UJD6 1360 aa18.18■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Ciapin1Q8WTY4 309 aa18.18■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Eif4a1P60843 406 aaKnown RBP18.17■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Gja5Q01231 358 aa18.17■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Arid3aQ62431 601 aa18.17■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Wwc2Q6NXJ0 1187 aa18.17■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Cavin4A2AMM0 362 aa18.16■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Cers3Q1A3B0 383 aa18.16■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Kif13bA0A286YCV9 1847 aa18.16■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Fkbp4P30416 458 aa18.15■□□□□ 0.5
Ldb3-207ENSMUST00000227819 NogP97466 232 aa18.15■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Cyp2d12Q8BVD2 504 aa18.15■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Klhdc4Q921I2 584 aa18.15■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Atf7ipQ7TT18 1306 aa18.15■□□□□ 0.5
Ldb3-207ENSMUST00000227819 GckrQ91X44 587 aa18.14■□□□□ 0.5
Ldb3-207ENSMUST00000227819 Ambra1A2AH22 1300 aa18.14■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Exoc6Q8R313 802 aa18.14■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Golga2Q921M4 999 aa18.14■□□□□ 0.49
Ldb3-207ENSMUST00000227819 NgdnQ9DB96 315 aaKnown RBP18.14■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Swt1Q9DBQ9 907 aa18.14■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Znf541Q0GGX2 1363 aa18.13■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Prr29B1ARI9 187 aa18.13■□□□□ 0.49
Ldb3-207ENSMUST00000227819 CastP51125 788 aa18.13■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Ifit1bl2Q3U687 466 aa18.13■□□□□ 0.49
Ldb3-207ENSMUST00000227819 PrimpolQ6P1E7 537 aa18.13■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Taf7Q9R1C0 341 aa18.13■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Golgb1E9PVZ8 3238 aa18.12■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Dlg5E9Q9R9 1921 aa18.11■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Dusp27Q148W8 1138 aa18.11■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Adam1aQ60813 791 aa18.11■□□□□ 0.49
Ldb3-207ENSMUST00000227819 SowahdQ8BY98 327 aa18.11■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Cd248Q91V98 765 aa18.11■□□□□ 0.49
Ldb3-207ENSMUST00000227819 1700019A02RikA0A087WPV9 146 aa18.1■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Cyp2c23E9Q5K4 494 aa18.1■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Chpf2Q3UU43 768 aa18.1■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Foxp4Q9DBY0 795 aaKnown RBP18.09■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Pik3ap1Q9EQ32 811 aa18.09■□□□□ 0.49
Ldb3-207ENSMUST00000227819 UtrnE9Q6R7 3430 aa18.08■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Zdbf2Q5SS00 2493 aaKnown RBP18.08■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Esx1O88933 382 aa18.08■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Map4k4P97820 1233 aaKnown RBP18.08■□□□□ 0.49
Ldb3-207ENSMUST00000227819 U2surpQ6NV83 1029 aaKnown RBP18.08■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Spire2Q8K1S6 718 aa18.08■□□□□ 0.49
Ldb3-207ENSMUST00000227819 St5Q924W7 1134 aa18.08■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Sipa1l3G3X9J0 1776 aa18.08■□□□□ 0.49
Ldb3-207ENSMUST00000227819 Stox1B2RQL2 990 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 CltaO08585 235 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Pdzph1Q8BGR1 1238 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Gjd4Q8BSD4 364 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Ssc5dQ8BV57 1371 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Igfbp6P47880 238 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Gtpbp6Q3U6U5 514 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 SympkQ80X82 1284 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Nlrp3Q8R4B8 1033 aa18.07■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Dbndd1Q9CZ00 160 aa18.06■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Mapk8ip1Q9WVI9 707 aa18.06■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Mtcl1Q3UHU5 1945 aa18.05■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Pde4bB1AWC9 736 aa18.05■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Dctn1O08788 1281 aa18.05■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Stra8P70278 393 aa18.05■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Trim52Q8CDV4 233 aa18.05■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Erbb4Q61527 1308 aa18.04■□□□□ 0.48
Ldb3-207ENSMUST00000227819 D830030K20RikE9PYQ5 218 aa18.04■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Gm3043K7N693 218 aa18.04■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Gm16440K7N6G6 218 aa18.04■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Gm2244L7N2A3 218 aa18.04■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Gm3278L7N2D2 218 aa18.04■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Gm8271L7N2E2 218 aa18.04■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Ptcd1Q8C2E4 695 aaKnown RBP18.04■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Duox1A2AQ92 1551 aa18.03■□□□□ 0.48
Ldb3-207ENSMUST00000227819 XpcP51612 930 aa18.03■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Zc3h12cQ5DTV4 884 aa18.03■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Mrc1Q61830 1456 aa18.03■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Ttll7A4Q9F0 912 aa18.02■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Zscan21Q07231 555 aa18.02■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Q3TQI7 289 aaKnown RBP18.02■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Unc5clQ6R653 518 aa18.02■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Znf428Q8C1M2 176 aa18.02■□□□□ 0.48
Ldb3-207ENSMUST00000227819 Atf5O70191 283 aa18.01■□□□□ 0.47
Ldb3-207ENSMUST00000227819 Hspa2P17156 633 aa18.01■□□□□ 0.47
Ldb3-207ENSMUST00000227819 Trim34aQ99PP6 485 aa18.01■□□□□ 0.47
Ldb3-207ENSMUST00000227819 Olfr247E9PVJ7 320 aa18.01■□□□□ 0.47
Ldb3-207ENSMUST00000227819 Olfr819K7N727 320 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms