RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 Cbx1P83917 185 aaKnown RBP30.78■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 Kcnf1Q7TSH7 493 aa30.78■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 DpydQ8CHR6 1025 aa30.78■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 Rufy3Q9D394 469 aa30.78■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 Gjb2Q00977 226 aa30.77■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 Mlh1Q9JK91 760 aa30.77■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 FancaQ9JL70 1439 aa30.77■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 Atp2b3Q0VF55 1220 aa30.76■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 Smc3Q9CW03 1217 aaKnown RBP30.76■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 PzpQ61838 1495 aa30.76■■■□□ 2.52
Ccdc9-202ENSMUST00000118976 Gm973E9Q295 1059 aa30.76■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Mcm3P25206 812 aaKnown RBP30.76■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Pof1bQ8K4L4 587 aa30.75■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Wdr24Q8CFJ9 790 aa30.74■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 PdcQ9QW08 244 aa30.73■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Cspp1B2RX88 1205 aa30.73■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Syt1P46096 421 aa30.73■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Astn2Q80Z10 1352 aa30.73■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Asxl2Q8BZ32 1370 aa30.73■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Sf3a1Q8K4Z5 791 aaKnown RBP30.72■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Adam1bQ8R534 806 aa30.72■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Add3Q9QYB5 706 aaKnown RBP30.72■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Tbc1d8Q9Z1A9 1134 aa30.72■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Ercc6l2Q9JIM3 1537 aa30.72■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Slit2Q9R1B9 1521 aa30.72■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Zc3h13E9Q784 1729 aaKnown RBP30.71■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Cfap157Q0VFX2 523 aa30.71■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Sass6Q80UK7 654 aa30.71■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Nup88Q8CEC0 753 aaKnown RBP30.71■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Dnajc14Q921R4 703 aa30.71■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Add2Q9QYB8 725 aa30.71■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Trim30aP15533 496 aa30.7■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 EappQ5BU09 281 aa30.7■■■□□ 2.51
Ccdc9-202ENSMUST00000118976 Zkscan7E9PVW1 718 aa30.69■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Usp25P57080 1055 aa30.69■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Q3TQI7 289 aaKnown RBP30.69■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Foxp4Q9DBY0 795 aaKnown RBP30.69■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Rab3gap1Q80UJ7 981 aa30.69■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Snx13Q6PHS6 957 aa30.68■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Nphp3Q7TNH6 1325 aa30.68■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Dync1i1O88485 628 aa30.68■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Cd22P35329 862 aa30.68■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Igbp1bQ9QZ29 343 aa30.68■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Brpf3B2KF05 1204 aaKnown RBP30.67■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Snap23O09044 210 aa30.67■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Nxf2Q4ZGD8 691 aa30.67■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 CtifQ6PEE2 600 aaKnown RBP30.67■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Rsph4aQ8BYM7 716 aa30.67■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Plcd3Q8K2J0 785 aa30.67■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 HypkQ9CR41 129 aa30.67■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Myo5bP21271 1818 aa30.67■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Fam43aQ8BUP8 424 aa30.66■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Spata31d1bE9QA57 1361 aa30.66■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Nop14Q8R3N1 860 aaKnown RBP30.66■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Disp3A3KFU9 1347 aa30.66■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 1700006A11RikB9EHI3 544 aa30.65■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Tti2Q8BGV4 512 aa30.64■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Ttc27Q8CD92 847 aa30.64■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Tnrc6bQ8BKI2 1810 aaKnown RBP30.64■■■□□ 2.5
Ccdc9-202ENSMUST00000118976 Cps1Q8C196 1500 aa30.64■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Cdkn1cP49919 348 aa30.64■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 CebpzP53569 1052 aaKnown RBP30.64■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Cchcr1Q8K2I2 770 aa30.64■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Oas2E9Q9A9 742 aa30.63■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Cct4P80315 539 aaKnown RBP30.63■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Tpd52l1O54818 204 aa30.62■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Gpatch11Q3UFS4 262 aa30.62■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Zbtb22Q9Z0G7 638 aa30.62■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Wdr33Q8K4P0 1330 aaKnown RBP30.62■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Ier5O89113 308 aa30.62■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 RdxP26043 583 aaKnown RBP30.62■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 CemipQ8BI06 1361 aa30.61■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Babam1Q3UI43 333 aa30.61■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Stk3Q9JI10 497 aa30.61■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Mad1l1Q9WTX8 717 aaKnown RBP30.61■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 NalcnQ8BXR5 1738 aa30.61■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Atf5O70191 283 aa30.6■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Pnpla7A2AJ88 1352 aa30.6■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Pik3c2bE9QAN8 1632 aa30.6■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Bach1P97302 739 aa30.59■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Usp48Q3V0C5 1052 aa30.59■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Afap1Q80YS6 731 aa30.59■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Kiaa0754Q69ZZ9 979 aa30.59■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Top1mtQ8R4U6 593 aa30.59■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 NaspQ99MD9 773 aaKnown RBP30.59■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Trpm3Q5F4S9 1721 aa30.59■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Nfatc2ipO09130 412 aa30.58■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 U2af2P26369 475 aaKnown RBP30.58■■■□□ 2.49
Ccdc9-202ENSMUST00000118976 Parp14Q2EMV9 1817 aa30.57■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Ppfia1B2RXQ2 1266 aa30.56■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Q9D9S1 216 aa30.56■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Znf335A2A5K6 1337 aa30.56■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Cdk4P30285 303 aa30.56■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Evi5lH3BKQ3 813 aa30.55■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Tyro3P55144 880 aa30.55■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Nfe2l3Q9WTM4 660 aa30.55■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Nap1l3Q794H2 544 aa30.55■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Brf1Q8CFK2 676 aa30.55■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Esyt1Q3U7R1 1092 aaKnown RBP30.54■■■□□ 2.48
Ccdc9-202ENSMUST00000118976 Ccdc66Q6NS45 935 aa30.54■■■□□ 2.48
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms