RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 EspnQ9ET47 871 aa28.58■■■□□ 2.17
Scn1b-201ENSMUST00000098548 Slfnl1Q8BHW9 410 aa28.58■■■□□ 2.17
Scn1b-201ENSMUST00000098548 Ric1Q69ZJ7 1422 aa28.57■■■□□ 2.16
Scn1b-201ENSMUST00000098548 CoblQ5NBX1 1337 aaKnown RBP28.57■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Hs1bp3Q3TC93 395 aa28.57■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Zbtb1Q91VL9 713 aa28.56■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Cnksr1A2A9K7 700 aa28.55■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Slc4a3P16283 1227 aa28.55■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Sv2bQ8BG39 683 aa28.54■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Nip7Q9CXK8 180 aaKnown RBP28.54■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Cyp2d11P24457 504 aa28.53■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Chmp5Q9D7S9 219 aa28.53■■■□□ 2.16
Scn1b-201ENSMUST00000098548 MetP16056 1379 aa28.52■■■□□ 2.16
Scn1b-201ENSMUST00000098548 C4bP01029 1738 aa28.52■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Aifm3Q3TY86 605 aa28.52■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Q3UPC7 1272 aa28.52■■■□□ 2.16
Scn1b-201ENSMUST00000098548 CoilQ5SU73 570 aa28.52■■■□□ 2.16
Scn1b-201ENSMUST00000098548 DiexfQ8BTT6 772 aaKnown RBP28.52■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Atl3Q91YH5 541 aa28.52■■■□□ 2.16
Scn1b-201ENSMUST00000098548 Duxf3A0A0N4SV92 674 aa28.51■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Gigyf1Q99MR1 1044 aaKnown RBP28.51■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Ttll7A4Q9F0 912 aa28.5■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Cers3Q1A3B0 383 aa28.5■■■□□ 2.15
Scn1b-201ENSMUST00000098548 MarsQ68FL6 902 aaKnown RBP28.5■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Fam198bQ3UPI1 517 aa28.49■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Maco1Q7TQE6 664 aaKnown RBP28.49■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Trim52Q8CDV4 233 aa28.49■■■□□ 2.15
Scn1b-201ENSMUST00000098548 MvpQ9EQK5 861 aa28.48■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Ezh2Q61188 746 aaKnown RBP28.47■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Hspa2P17156 633 aa28.46■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Erbb4Q61527 1308 aa28.46■■■□□ 2.15
Scn1b-201ENSMUST00000098548 OscarQ8VBT3 265 aa28.45■■■□□ 2.15
Scn1b-201ENSMUST00000098548 Morc2aQ69ZX6 1030 aa28.45■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Znf330Q922H9 316 aa28.45■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Strn4P58404 760 aa28.44■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Liat1Q810M6 228 aa28.43■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Ppp1r3fQ9JIG4 799 aa28.43■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Disp3A3KFU9 1347 aa28.42■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Irf9Q61179 399 aa28.42■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Ric3Q8BPM6 367 aa28.42■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Flt4P35917 1363 aa28.42■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Ankrd44B2RXR6 993 aa28.41■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Echdc1Q9D9V3 322 aa28.41■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Rapgef4Q9EQZ6 1011 aa28.41■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Hmgb2P30681 210 aaKnown RBP28.4■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Nutm1Q8BHP2 1126 aa28.4■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Trip6Q9Z1Y4 480 aa28.4■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Ddx60E9PZQ1 1711 aa28.39■■■□□ 2.14
Scn1b-201ENSMUST00000098548 MeiocA2AG06 965 aa28.39■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Prr5lA2AVJ5 370 aa28.39■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Lrrc43Q3V0L5 667 aa28.39■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Aldh1l2Q8K009 923 aa28.39■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Sipa1l3G3X9J0 1776 aa28.39■■■□□ 2.14
Scn1b-201ENSMUST00000098548 Ubr3Q5U430 1889 aa28.38■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Kif23E9Q5G3 953 aa28.37■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Ankle2Q6P1H6 964 aa28.37■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Fam71e1A1L3C1 212 aa28.37■■■□□ 2.13
Scn1b-201ENSMUST00000098548 RtcbQ99LF4 505 aaKnown RBP28.37■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Bicc1Q99MQ1 977 aaKnown RBP28.36■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Map3k2Q61083 619 aa28.35■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Sumf1Q8R0F3 372 aa28.35■■■□□ 2.13
Scn1b-201ENSMUST00000098548 HnrnpuQ8VEK3 800 aaKnown RBP28.35■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Nsfl1cQ9CZ44 370 aaKnown RBP28.35■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Exoc6bA6H5Z3 810 aa28.34■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Ccdc85cE9Q6B2 420 aa28.34■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Atp1b3P97370 278 aa28.34■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Adam1aQ60813 791 aa28.34■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Esco1Q69Z69 843 aa28.34■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Srp68Q8BMA6 625 aaKnown RBP28.34■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Wwc1Q5SXA9 1104 aa28.33■■■□□ 2.13
Scn1b-201ENSMUST00000098548 HmcesQ8R1M0 353 aaKnown RBP28.33■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Col11a2Q64739 1736 aa28.33■■■□□ 2.13
Scn1b-201ENSMUST00000098548 Msl1Q6PDM1 616 aa28.33■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Rlbp1Q9Z275 317 aa28.32■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Ssc5dQ8BV57 1371 aa28.31■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Zbtb40Q6PCS8 1258 aa28.31■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Akt1s1Q9D1F4 257 aa28.31■■■□□ 2.12
Scn1b-201ENSMUST00000098548 VirmaA2AIV2 1811 aaKnown RBP28.31■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Jdp2P97875 163 aa28.3■■■□□ 2.12
Scn1b-201ENSMUST00000098548 B4galnt3Q6L8S8 986 aa28.3■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Tlr8P58682 1032 aa28.29■■■□□ 2.12
Scn1b-201ENSMUST00000098548 NppbP40753 121 aa28.28■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Nlrp3Q8R4B8 1033 aa28.28■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Lama4P97927 1816 aa28.28■■■□□ 2.12
Scn1b-201ENSMUST00000098548 MypnQ5DTJ9 1315 aa28.28■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Slf2Q6P9P0 1278 aa28.28■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Map7O88735 730 aa28.27■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Mphosph10Q810V0 681 aaKnown RBP28.27■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Amhr2Q8K592 568 aa28.27■■■□□ 2.12
Scn1b-201ENSMUST00000098548 Ildr2B5TVM2 661 aa28.26■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Ppm1mQ8BU27 406 aa28.26■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Ank1Q02357 1862 aa28.26■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Snai1Q02085 264 aa28.25■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Gnl3lQ6PGG6 577 aaKnown RBP28.25■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Dpf1Q9QX66 387 aa28.25■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Spata31d1bE9QA57 1361 aa28.25■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Prr29B1ARI9 187 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Bend3Q6PAL0 825 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Chrna2Q91X60 512 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Tktl2Q9D4D4 627 aa28.24■■■□□ 2.11
Retrieved 100 of 22,080 RNA–protein pairs in 68.5 ms