RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Ccdc39Q9D5Y1 937 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Hecw2Q6I6G8 1578 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Prrc2bQ7TPM1 1486 aaKnown RBP8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Pdcl2Q78Y63 240 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Plekho1Q9JIY0 408 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Znf608Q56A10 1511 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Usp37Q8C0R0 979 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Pde3aQ9Z0X4 1141 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 SlkO54988 1233 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Tnrc6bQ8BKI2 1810 aaKnown RBP8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 ApobrQ8VBT6 942 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cwc27Q3TKY6 469 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Sel1lQ9Z2G6 790 aa8.5□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Atf7Q8R0S1 413 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Slc5a4bQ91ZP4 660 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 NgdnQ9DB96 315 aaKnown RBP8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cdc42bpbQ7TT50 1713 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Dot1lQ6XZL8 1540 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Irf9Q61179 399 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Pmfbp1Q9WVQ0 1022 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ehbp1l1Q99MS7 1716 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 TnmdQ9EP64 317 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Nphp3Q7TNH6 1325 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cetn2Q9R1K9 172 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ankrd44B2RXR6 993 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Fam160b2Q80YR2 744 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Aldh8a1Q8BH00 487 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cwc25Q9DBF7 416 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 GnaqP21279 359 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Fbln2P37889 1221 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ptpdc1Q6NZK8 747 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cdan1Q8CC12 1239 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Lrrfip2Q91WK0 415 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Tarbp1E9Q368 1579 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ino80Q6ZPV2 1559 aa8.49□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Abcf1Q6P542 837 aaKnown RBP8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Tango6Q8C3S2 1079 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Vps36Q91XD6 386 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Atg3Q9CPX6 314 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Rbm5Q91YE7 815 aaKnown RBP8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 SelenooQ9DBC0 667 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 HomezQ80W88 542 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Adgrb3Q80ZF8 1522 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Zc3h13E9Q784 1729 aaKnown RBP8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Traf3ip1Q149C2 625 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Apaf1O88879 1249 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Map9Q3TRR0 646 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Gm45140A0A0N4SUM8 220 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Igbp1bQ9QZ29 343 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ttc41Q692V3 1318 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Abca8aQ8K442 1620 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Rfx1P48377 963 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Bag1Q60739 355 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Fsd1Q7TPM6 496 aa8.48□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Api5O35841 504 aaKnown RBP8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Plekhm2Q80TQ5 1018 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Rrp9Q91WM3 475 aaKnown RBP8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ppip5k2Q6ZQB6 1129 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Irgm2A0A140LIF8 407 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Hook2Q7TMK6 716 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cfap69Q8BH53 942 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Pym1Q8CHP5 203 aaKnown RBP8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Hs2st1Q8R3H7 356 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cetn1P41209 172 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 LifrP42703 1092 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Stk36Q69ZM6 1316 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Erbb4Q61527 1308 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ncapd2Q8K2Z4 1392 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ces1aE9PYP1 563 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 TxlnaQ6PAM1 554 aaKnown RBP8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cep55Q8BT07 462 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ccdc150Q8CDI7 1110 aa8.47□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Tom1O88746 492 aa8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Q7TT23 1179 aa8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Taf7Q9R1C0 341 aa8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Fkbp4P30416 458 aa8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Ppp2r5bQ6PD28 497 aa8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 DesP31001 469 aaKnown RBP8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Nup88Q8CEC0 753 aaKnown RBP8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Gtpbp4Q99ME9 634 aaKnown RBP8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Palm3A2TJV2 734 aa8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Cyb5rlB1AS42 316 aa8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Mrps27Q8BK72 415 aaKnown RBP8.46□□□□□ -1.05
Scn3a-201ENSMUST00000066432 Prkar2bP31324 416 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Uspl1Q3ULM6 1089 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Gimap5Q8BWF2 308 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Ppm1fQ8CGA0 452 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Krt23Q99PS0 422 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Mad1l1Q9WTX8 717 aaKnown RBP8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Uchl5Q9WUP7 329 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Rdm1Q9CQK3 281 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Rad50P70388 1312 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Rad23bP54728 416 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Nap1l4Q78ZA7 375 aaKnown RBP8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Maco1Q7TQE6 664 aaKnown RBP8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 NapbP28663 298 aa8.46□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Tmco3Q8BH01 678 aa8.45□□□□□ -1.06
Scn3a-201ENSMUST00000066432 LlphQ9D945 130 aaKnown RBP8.45□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Calm1P0DP26 149 aaKnown RBP8.45□□□□□ -1.06
Scn3a-201ENSMUST00000066432 Calm2P0DP27 149 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms