RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 TmpoQ61033 693 aaKnown RBP17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Ccne1Q61457 408 aa17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Mlh1Q9JK91 760 aa17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 PdcQ9QW08 244 aa17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Ahdc1Q6PAL7 1594 aaKnown RBP17.73■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Brpf3B2KF05 1204 aaKnown RBP17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Zkscan7E9PVW1 718 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Oas2E9Q9A9 742 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Cdkn1cP49919 348 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Usp25P57080 1055 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Vgll3P85442 326 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 CtifQ6PEE2 600 aaKnown RBP17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Rufy3Q9D394 469 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Add3Q9QYB5 706 aaKnown RBP17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 RdxP26043 583 aaKnown RBP17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Bach1P97302 739 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Cfap157Q0VFX2 523 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Unc5clQ6R653 518 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Zbtb22Q9Z0G7 638 aa17.72■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Hoxa7P02830 229 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Babam1Q3UI43 333 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Fam83gQ5SWY7 812 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Rab3gap1Q80UJ7 981 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Nup88Q8CEC0 753 aaKnown RBP17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Rad50P70388 1312 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 AglF8VPN4 1532 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Nfatc2ipO09130 412 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Prim1P20664 417 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Cchcr1Q8K2I2 770 aa17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Nop14Q8R3N1 860 aaKnown RBP17.71■□□□□ 0.43
Ushbp1-201ENSMUST00000049184 Syt1P46096 421 aa17.7■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Zhx1P70121 873 aa17.7■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 AdgbG3UZ78 1657 aa17.7■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Kif1aP33173 1695 aa17.69■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Cd22P35329 862 aa17.69■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Scaf1Q5U4C3 1256 aaKnown RBP17.69■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Plcd3Q8K2J0 785 aa17.69■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Mad1l1Q9WTX8 717 aaKnown RBP17.69■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Dip2cE9PWR4 1557 aa17.68■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Stk36Q69ZM6 1316 aa17.68■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Igbp1bQ9QZ29 343 aa17.68■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Spata31d1bE9QA57 1361 aa17.68■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Brpf1B2RRD7 1212 aa17.68■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Usp48Q3V0C5 1052 aa17.68■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Gtf3c5Q8R2T8 520 aa17.68■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Dip2aQ8BWT5 1523 aa17.68■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 HypkQ9CR41 129 aa17.67■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Wdr33Q8K4P0 1330 aaKnown RBP17.66■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 RereQ80TZ9 1558 aa17.66■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Ttc27Q8CD92 847 aa17.66■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Stk3Q9JI10 497 aa17.66■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Nwd1A6H603 1563 aa17.65■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Q3TQI7 289 aaKnown RBP17.65■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Add2Q9QYB8 725 aa17.65■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Nphp3Q7TNH6 1325 aa17.65■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Tti2Q8BGV4 512 aa17.64■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Stac3Q8BZ71 360 aa17.64■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Ifi35Q9D8C4 286 aa17.64■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Nfe2l3Q9WTM4 660 aa17.64■□□□□ 0.42
Ushbp1-201ENSMUST00000049184 Tet3Q8BG87 1668 aa17.64■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 PplQ9R269 1755 aa17.64■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 PtpruB1AUH1 1446 aa17.64■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Card6E9PWH2 1175 aa17.63■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Cdk4P30285 303 aa17.63■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Tyro3P55144 880 aa17.63■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Nap1l3Q794H2 544 aa17.63■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 NaspQ99MD9 773 aaKnown RBP17.63■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Ccdc66Q6NS45 935 aa17.63■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Hmgn5Q9JL35 406 aa17.63■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Kif13aQ9EQW7 1749 aa17.63■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Snap23O09044 210 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Dixdc1Q80Y83 711 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Msh6P54276 1358 aaKnown RBP17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 CatipB9EKE5 520 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Evi5lH3BKQ3 813 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 F2rP30558 430 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Polr3gQ6NXY9 223 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Nrbp1Q99J45 535 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Igsf1Q7TQA1 1317 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 PzpQ61838 1495 aa17.62■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Esyt1Q3U7R1 1092 aaKnown RBP17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Taf3Q5HZG4 932 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Q9D9S1 216 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 1700006A11RikB9EHI3 544 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 CgnP59242 1191 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Cnnm3Q32NY4 713 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Nlrp3Q8R4B8 1033 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Top1mtQ8R4U6 593 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Fam114a1Q9D281 569 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Ndufa8Q9DCJ5 172 aa17.61■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 FancaQ9JL70 1439 aa17.6■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Cct4P80315 539 aaKnown RBP17.6■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Gm156Q58A37 223 aa17.6■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 TnmdQ9EP64 317 aa17.6■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Hmx1O70218 332 aa17.59■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Zfp397Q7TNK4 527 aa17.59■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Asxl2Q8BZ32 1370 aa17.59■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Zscan29E9Q5B4 869 aa17.59■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Ier5O89113 308 aa17.59■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Ano6Q6P9J9 911 aa17.59■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms