RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 4930572O03RikQ8C5Y0 211 aa17.89■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Terf2O35144 541 aa17.88■□□□□ 0.45
Tpm3-201ENSMUST00000029549 SympkQ80X82 1284 aa17.88■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Bcar3Q9QZK2 820 aa17.88■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Ier5O89113 308 aa17.88■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Ppip5k2Q6ZQB6 1129 aa17.88■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Fam50bQ9WTJ8 334 aa17.88■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Zkscan2G3X952 960 aa17.87■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Cfdp1O88271 295 aaKnown RBP17.87■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Iqsec3Q3TES0 1195 aa17.87■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Mphosph10Q810V0 681 aaKnown RBP17.87■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Flt4P35917 1363 aa17.87■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Plekhd1B2RPU2 505 aa17.87■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Catsper2A2ARP9 588 aa17.86■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Map3k2Q61083 619 aa17.86■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Irf9Q61179 399 aa17.86■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Ssfa2Q922B9 1252 aa17.86■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Pdia6Q922R8 440 aaKnown RBP17.86■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Pard3Q99NH2 1333 aa17.85■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Morc2aQ69ZX6 1030 aa17.85■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Sgsm1Q8BPQ7 1093 aa17.85■□□□□ 0.45
Tpm3-201ENSMUST00000029549 ZgpatQ8VDM1 511 aa17.85■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Tnrc6cQ3UHC0 1690 aaKnown RBP17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 HdgfP51859 237 aaKnown RBP17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Ptpdc1Q6NZK8 747 aa17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Asic4Q7TNS7 539 aa17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Akap11E9Q777 1895 aa17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Ubr2Q6WKZ8 1755 aa17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 HellsQ60848 821 aa17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Eif3bQ8JZQ9 803 aaKnown RBP17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Q9D2X8 372 aa17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 TefQ9JLC6 301 aa17.84■□□□□ 0.45
Tpm3-201ENSMUST00000029549 DaxxO35613 739 aa17.83■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Tlr7P58681 1050 aa17.83■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Eif3aP23116 1344 aaKnown RBP17.83■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Zpr1Q62384 459 aa17.83■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Kdm4cQ8VCD7 1054 aa17.83■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Ccdc129Q14B48 1034 aa17.82■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Map3k13Q1HKZ5 959 aa17.82■□□□□ 0.44
Tpm3-201ENSMUST00000029549 1700010I14RikQ7TPG0 532 aa17.82■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Dmrt2Q8BG36 561 aa17.82■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Elp1Q7TT37 1333 aaKnown RBP17.82■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Fnbp4Q6ZQ03 1031 aa17.81■□□□□ 0.44
Tpm3-201ENSMUST00000029549 RestQ8VIG1 1082 aa17.81■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Tceal9Q9DD24 104 aa17.81■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Slc4a10Q5DTL9 1118 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Erc2Q6PH08 957 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 EngaseQ8BX80 734 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Hmox1P14901 289 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Cct4P80315 539 aaKnown RBP17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Cnnm1Q0GA42 951 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Mum1Q6DID5 682 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Slx1bQ8BX32 270 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Pdlim2Q8R1G6 349 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Noc3lQ8VI84 807 aaKnown RBP17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Mast2Q60592 1734 aa17.8■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Rnf123Q5XPI3 1314 aa17.79■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Fer1l6E0CZ42 1862 aa17.79■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Bicc1Q99MQ1 977 aaKnown RBP17.79■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Speer4bQ9D9F7 267 aa17.79■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Ccdc9Q8VC31 543 aaKnown RBP17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Shank2Q80Z38 1476 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Ltbp1Q8CG19 1712 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Gm21663A0A0G2JE01 267 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Gm7361D3Z6R1 267 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 5031410I06RikE9Q4E0 267 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Gm1979E9QAN3 267 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Gm5862K7N5V5 267 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Gm10220K7N660 267 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Tgfb1i1Q62219 461 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Prkab2Q6PAM0 271 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Larp1Q6ZQ58 1072 aaKnown RBP17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Slc5a1Q8C3K6 665 aa17.78■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Igfbp6P47880 238 aa17.77■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Rfx1P48377 963 aa17.77■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Ppm1mQ8BU27 406 aa17.77■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Emilin2Q8K482 1074 aa17.77■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Antxr1Q9CZ52 562 aa17.77■□□□□ 0.44
Tpm3-201ENSMUST00000029549 Tpx2A2APB8 745 aaKnown RBP17.76■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Nsfl1cQ9CZ44 370 aaKnown RBP17.76■□□□□ 0.43
Tpm3-201ENSMUST00000029549 PigbQ9JJQ0 542 aa17.76■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Grm8P47743 908 aa17.76■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Prune1Q8BIW1 454 aa17.76■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Cacna1sQ02789 1880 aa17.76■□□□□ 0.43
Tpm3-201ENSMUST00000029549 CalcaP70160 136 aa17.75■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Nol8Q3UHX0 1147 aaKnown RBP17.75■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Sf3b2Q3UJB0 878 aaKnown RBP17.75■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Tjp1P39447 1745 aaKnown RBP17.75■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Efcab2Q9CQ46 164 aa17.75■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Lmbr1lQ9D1E5 489 aa17.75■□□□□ 0.43
Tpm3-201ENSMUST00000029549 VgfQ0VGU4 617 aa17.74■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Ttll7A4Q9F0 912 aa17.74■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Gm21680A0A0G2JGR8 267 aa17.73■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Rsph3aQ3UFY4 516 aa17.73■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Flad1Q8R123 492 aa17.73■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Mrps27Q8BK72 415 aaKnown RBP17.72■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Abcc4E9Q236 1325 aa17.72■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Ddx60E9PZQ1 1711 aa17.72■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Hsp90b1P08113 802 aaKnown RBP17.71■□□□□ 0.43
Tpm3-201ENSMUST00000029549 Slc39a6Q8C145 765 aa17.71■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms