RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Cfap99A0A140LIX9 648 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ccdc152E9PX14 254 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Dhx16G3X8X0 1044 aaKnown RBP5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 IbspQ61711 324 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ppp6r1Q7TSI3 856 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Tomm22Q9CPQ3 142 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cdc37l1Q9CZP7 335 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Wdr33Q8K4P0 1330 aaKnown RBP5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Mnat1P51949 309 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Usp32F8VPZ3 1604 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cep131Q62036 1060 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Terf2O35144 541 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Polr3gQ6NXY9 223 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Erlin1Q91X78 346 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Fam114a1Q9D281 569 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Egfem1Q8C088 590 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Abca8aQ8K442 1620 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Sept11Q8C1B7 431 aaKnown RBP5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Stxbp4Q9WV89 557 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Erc1Q99MI1 1120 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Nap1l5Q9JJF0 156 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ttc37F8VPK0 1563 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Kdm4cQ8VCD7 1054 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cdkl5Q3UTQ8 938 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Bms1Q6PGF5 1284 aaKnown RBP5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Noc2lQ9WV70 747 aaKnown RBP5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Pank1Q8K4K6 548 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Riok1Q922Q2 567 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Atg3Q9CPX6 314 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Hmg20bQ9Z104 317 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ubn2Q80WC1 1314 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ccdc96Q9CR92 584 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Zeb2Q9R0G7 1215 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ankrd1Q9CR42 319 aa5.32□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Zkscan7E9PVW1 718 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 CrcpO35427 148 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cdca8Q8BHX3 289 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Nphp3Q7TNH6 1325 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Olr1Q9EQ09 363 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Gm42641I6L9G2 585 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Abcf1Q6P542 837 aaKnown RBP5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 AtripQ8BMG1 785 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ccdc178Q8CDV0 866 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Gemin5Q8BX17 1502 aaKnown RBP5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ankrd44B2RXR6 993 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ctage5Q8R311 779 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Lrrfip2Q91WK0 415 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 MycbpQ9EQS3 103 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Zfp597E9Q6S0 419 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Nkx1-2P42580 305 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 CenppQ9CZ92 286 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 PdiltQ9DAN1 588 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cetn1P41209 172 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cbx1P83917 185 aaKnown RBP5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 TatQ8QZR1 454 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Smtnl1Q99LM3 459 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Odf2lQ9D478 642 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Myh10Q61879 1976 aaKnown RBP5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ehbp1Q69ZW3 1231 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Mrps27Q8BK72 415 aaKnown RBP5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Gigyf1Q99MR1 1044 aaKnown RBP5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cfap58B2RW38 873 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Atp8b3Q6UQ17 1335 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cdk19Q8BWD8 501 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Stard3nlQ9DCI3 235 aa5.31□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Scaf11E9PZM7 1456 aaKnown RBP5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Kdm6aO70546 1401 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Maats1Q8BRC6 783 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cep57l1Q8VDS7 400 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Nphp1Q9QY53 687 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Atp7bQ64446 1462 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ube2hP62257 183 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Shtn1Q8K2Q9 631 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 TnmdQ9EP64 317 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Dip2aQ8BWT5 1523 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Nf2P46662 596 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Tubb2aQ7TMM9 445 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Brms1Q99N20 246 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Tubb2bQ9CWF2 445 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Golga5Q9QYE6 729 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ccdc102aQ3TMW1 549 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Gbp4Q61107 620 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Tmem87bQ8BKU8 555 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ift57Q8BXG3 429 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Q9D9H8 365 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Lmbr1Q9JIT0 490 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 AatkQ80YE4 1365 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Chd1P40201 1711 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Kcnj4P52189 445 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Q9D2X8 372 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Q9D9S1 216 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 NefhP19246 1090 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Irx1P81068 480 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Prm3Q62100 101 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Arhgef18Q6P9R4 1021 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Znf608Q56A10 1511 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Zhx1P70121 873 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Tmed8Q3UHI4 326 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Olfml1Q8BSH2 233 aa5.3□□□□□ -1.56
Prkdc-201ENSMUST00000023352 SarnpQ9D1J3 210 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms