RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 OR11H7Q8NGC8 314 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 DPY30Q9C005 99 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 MED28Q9H204 178 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 RANBP3Q9H6Z4 567 aaPredicted RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 HPF1Q9NWY4 346 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SDHAF2Q9NX18 166 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 OR12D3Q9UGF7 316 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 CYB5R1Q9UHQ9 305 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 ACSL5Q9ULC5 683 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 BAIAP2Q9UQB8 552 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 IGKV6D-21A0A0A0MT36 114 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SLC22A23A1A5C7 686 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 HNRNPCL2B2RXH8 293 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 CBX4O00257 560 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 BTN3A1O00481 513 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 CELF2O95319 508 aaKnown RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 PRAMEF1O95521 474 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 STAU1O95793 577 aaKnown RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 HLA-DQB1P01920 261 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 HRGP04196 525 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SLC2A3P11169 496 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SCAPQ12770 1279 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 LRRC32Q14392 662 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 ABRAXAS2Q15018 415 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 PGBD3Q8N328 593 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 MS4A15Q8N5U1 240 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 LRRC17Q8N6Y2 441 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SRFBP1Q8NEF9 429 aaKnown RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 NTAN1Q96AB6 310 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 KIAA1143Q96AT1 154 aaPredicted RBP12.35□□□□□ -0.43
HERC3-203ENST00000407637 ATG4CQ96DT6 458 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 FEVQ99581 238 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 INPP5KQ9BT40 448 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SIK2Q9H0K1 926 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 TMEM184CQ9NVA4 438 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 RBM22Q9NW64 420 aaKnown RBP eCLIP12.35□□□□□ -0.43
HERC3-203ENST00000407637 DDIT4Q9NX09 232 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 STUB1Q9UNE7 303 aa12.35□□□□□ -0.43
HERC3-203ENST00000407637 FAM25EA8MYX2 175 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 E2F3O00716 465 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 PSMA1P25786 263 aaKnown RBP12.34□□□□□ -0.43
HERC3-203ENST00000407637 NNMTP40261 264 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 HAAOP46952 286 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 KCTD2Q14681 263 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 DUSP6Q16828 381 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 LGALSLQ3ZCW2 172 aaPredicted RBP12.34□□□□□ -0.43
HERC3-203ENST00000407637 BCL2L15Q5TBC7 163 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 CTU1Q7Z7A3 348 aaKnown RBP12.34□□□□□ -0.43
HERC3-203ENST00000407637 DNAJC5GQ8N7S2 189 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 RADILQ96JH8 1075 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 P2RY13Q9BPV8 354 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 SORBS1Q9BX66 1292 aaKnown RBP12.34□□□□□ -0.43
HERC3-203ENST00000407637 REG4Q9BYZ8 158 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 LDAHQ9H6V9 325 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 SLC28A3Q9HAS3 691 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 RNF19AQ9NV58 838 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 RLIMQ9NVW2 624 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 SEC14L4Q9UDX3 406 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 RAB23Q9ULC3 237 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 HYKKA2RU49 373 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 CLDN5O00501 218 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 BEST1O76090 585 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 PRSS56P0CW18 603 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 SUOXP51687 545 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 PCDH1Q08174 1060 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 PUDPQ08623 228 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 SCRN3Q0VDG4 424 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 PDE12Q6L8Q7 609 aaKnown RBP12.34□□□□□ -0.43
HERC3-203ENST00000407637 BHLHB9Q6PI77 547 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 RBFAQ8N0V3 343 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 ATOH1Q92858 354 aaPredicted RBP12.34□□□□□ -0.43
HERC3-203ENST00000407637 UCN3Q969E3 161 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 TPD52L3Q96J77 140 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 SLC2A13Q96QE2 648 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 GSX2Q9BZM3 304 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 FAM124BQ9H5Z6 455 aaPredicted RBP12.34□□□□□ -0.43
HERC3-203ENST00000407637 BRD7Q9NPI1 651 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 SLCO1C1Q9NYB5 712 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 CLEC2DQ9UHP7 191 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 FBXW11Q9UKB1 542 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 PCDHGA9Q9Y5G4 932 aaKnown RBP12.34□□□□□ -0.43
HERC3-203ENST00000407637 PCDHGA2Q9Y5H1 932 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 CDH10Q9Y6N8 788 aa12.34□□□□□ -0.43
HERC3-203ENST00000407637 LCTP09848 1927 aa12.33□□□□□ -0.43
HERC3-203ENST00000407637 ALPK3Q96L96 1907 aa12.33□□□□□ -0.43
HERC3-203ENST00000407637 MROH6A6NGR9 719 aa12.33□□□□□ -0.44
HERC3-203ENST00000407637 RHOBTB1O94844 696 aa12.33□□□□□ -0.44
HERC3-203ENST00000407637 PLATP00750 562 aa12.33□□□□□ -0.44
HERC3-203ENST00000407637 CHRM5P08912 532 aaPredicted RBP12.33□□□□□ -0.44
HERC3-203ENST00000407637 PTX3P26022 381 aaPredicted RBP12.33□□□□□ -0.44
HERC3-203ENST00000407637 CDKN2CP42773 168 aa12.33□□□□□ -0.44
HERC3-203ENST00000407637 INPP1P49441 399 aa12.33□□□□□ -0.44
HERC3-203ENST00000407637 RPL6Q02878 288 aaKnown RBP12.33□□□□□ -0.44
HERC3-203ENST00000407637 HSF2Q03933 536 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms