RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 GFYI3L273 518 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 KPNA5O15131 536 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 ARPC2O15144 300 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 AP2A2O94973 939 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 MPC1LP0DKB6 136 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 GGT5P36269 586 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 EIF2DP41214 584 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 GNG2P59768 71 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 TMEM115Q12893 351 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 SHHQ15465 462 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 DUSP6Q16828 381 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 HNRNPA1L2Q32P51 320 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 METTL2BQ6P1Q9 378 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 NEK5Q6P3R8 708 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 TUBA3EQ6PEY2 450 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 ADCK1Q86TW2 530 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 ARRDC3Q96B67 414 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 RDH12Q96NR8 316 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 BDH2Q9BUT1 245 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 PIF1Q9H611 641 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 NAALAD2Q9Y3Q0 740 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 SNX5Q9Y5X3 404 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 MYO9BQ13459 2157 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 TBC1D3BA6NDS4 549 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 K7ESM1 405 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 TOR1BO14657 336 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 SPINT1O43278 529 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 NDUFS2O75306 463 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 KRT8P05787 483 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 ABCB1P08183 1280 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 PRKCAP17252 672 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 ZNF234Q14588 700 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 CYP51A1Q16850 503 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 C8orf59Q8N0T1 100 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 ASCC1Q8N9N2 400 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 OR8D1Q8WZ84 308 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 TMEM125Q96AQ2 219 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 FAM83CQ9BQN1 747 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 ADNPQ9H2P0 1102 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 POLE4Q9NR33 117 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 ANAPC2Q9UJX6 822 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 PCDHA9Q9Y5H5 950 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 SLC28A1O00337 649 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 PTTG1O95997 202 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 PDYNP01213 254 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 GNPDA1P46926 289 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 HNMTP50135 292 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 VASPP50552 380 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 FOXM1Q08050 763 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 VAC14Q08AM6 782 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 CDKL4Q5MAI5 379 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 TTC23Q5W5X9 447 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 TANGO2Q6ICL3 276 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 TMEM220Q6QAJ8 160 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 RFPL4BQ6ZWI9 263 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 PRSS48Q7RTY5 328 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 LRRC70Q7Z2Q7 622 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 LYSMD2Q8IV50 215 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 CLHC1Q8NHS4 586 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 HCAR2Q8TDS4 363 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 TMEM159Q96B96 161 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 DACH2Q96NX9 599 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 ALG2Q9H553 416 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 LRTM1Q9HBL6 345 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 NPAP1Q9NZP6 1156 aa16.5■□□□□ 0.23
SHKBP1-205ENST00000594973 EDDM13A0A1B0GTR0 161 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 TCRBV5S2A0A599 114 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 ZNF99A8MXY4 864 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 ANKRD28O15084 1053 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 ATG13O75143 517 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 SLCO2B1O94956 709 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 CRYZL1O95825 349 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 HTR1AP08908 422 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 SLC6A12P48065 614 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 ALDH3A2P51648 485 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 SP140Q13342 867 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 MAPK11Q15759 364 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 CCDC58Q4VC31 144 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 C6orf141Q5SZD1 244 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 TRIM46Q7Z4K8 759 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 PTRH1Q86Y79 214 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 TCAIMQ8N3R3 496 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 LIX1Q8N485 282 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 SELENOMQ8WWX9 145 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 DTD2Q96FN9 168 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 AURKBQ96GD4 344 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 PPM1MQ96MI6 270 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 VPS35Q96QK1 796 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 ACPTQ9BZG2 426 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 ELOVL6Q9H5J4 265 aa16.49■□□□□ 0.23
SHKBP1-205ENST00000594973 MMP20O60882 483 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 RECQL5O94762 991 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 ITGB7P26010 798 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 GP2P55259 537 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 LIPEQ05469 1076 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 KRR1Q13601 381 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 CCSMST1Q4G0I0 132 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 CACUL1Q86Y37 369 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms