RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 CUL1Q13616 776 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 DHX34Q14147 1143 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 ABHD17BQ5VST6 288 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 SP5Q6BEB4 398 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 HIBCHQ6NVY1 386 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 GFRALQ6UXV0 394 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 SRRM1Q8IYB3 904 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 PRELID2Q8N945 189 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 GIMAP7Q8NHV1 300 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 SUN3Q8TAQ9 357 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 METTL21AQ8WXB1 218 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 ASB11Q8WXH4 323 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 KCNJ9Q92806 393 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 MARVELD3Q96A59 401 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 ZNF669Q96BR6 464 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 IMMP1LQ96LU5 166 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 PRAP1Q96NZ9 151 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 TUBB6Q9BUF5 446 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 RNF32Q9H0A6 362 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 LZTFL1Q9NQ48 299 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 FBXO6Q9NRD1 293 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 COPG2Q9UBF2 871 aa14.35□□□□□ -0.11
CSNK1E-208ENST00000431611 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 FAM237BA0A1B0GVD1 139 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 OR5H15A6NDH6 313 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 PRSS44E7EML9 344 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 H0YIG0 161 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 GFYI3L273 518 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 RASAL1O95294 804 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 CRYABP02511 175 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 F7P08709 466 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 MYBL2P10244 700 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 ENO3P13929 434 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 TNFRSF8P28908 595 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 MAGEA6P43360 314 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 EFNA3P52797 238 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 CTBP1Q13363 440 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 ANKRD22Q5VYY1 191 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 CAND1Q86VP6 1230 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 DENND6AQ8IWF6 608 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 LRRC56Q8IYG6 542 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 AMER2Q8N7J2 671 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 OR9A4Q8NGU2 314 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 STMN3Q9NZ72 180 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 TEKT2Q9UIF3 430 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 MED16Q9Y2X0 877 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 DHRS7Q9Y394 339 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 DOCK10Q96BY6 2186 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 ITPR2Q14571 2701 aa14.34□□□□□ -0.11
CSNK1E-208ENST00000431611 CACNA1DQ01668 2161 aa14.33□□□□□ -0.11
CSNK1E-208ENST00000431611 CROCCQ5TZA2 2017 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 SDR42E2A6NKP2 422 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 UNC5CO95185 931 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 KRT14P02533 472 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 STATHP02808 62 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 MLNP12872 115 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 IMPA1P29218 277 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 CXCR5P32302 372 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 SKIV2L2P42285 1042 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 ZNF33BQ06732 778 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 NAA30Q147X3 362 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 LONRF1Q17RB8 773 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 MINDY4Q4G0A6 757 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 MFSD4BQ5TF39 518 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 ZNF549Q6P9A3 640 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 TMEM207Q6UWW9 146 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 CYHR1Q6ZMK1 362 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 SPNS2Q8IVW8 549 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 DNAJB8Q8NHS0 232 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 CYTH2Q99418 400 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 TMEM184CQ9NVA4 438 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 ABI3Q9P2A4 366 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 SEC14L3Q9UDX4 400 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 CREBBPQ92793 2442 aa14.33□□□□□ -0.12
CSNK1E-208ENST00000431611 MDC1Q14676 2089 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 TRGV8A0A0C4DH27 118 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 IGHV3-20A0A0C4DH32 117 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 ZCWPW2A0A1B0GU75 182 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 A8MUI8 341 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 PRAMEF2O60811 474 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 SEC24DO94855 1032 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 NSA2O95478 260 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 CCDC175P0C221 793 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 PRF1P14222 555 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 HRH2P25021 359 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 MST1P26927 711 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 SNRPNP63162 240 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 ART3Q13508 389 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 ZNF662Q6ZS27 426 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 UBE2R2Q712K3 238 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 PIWIL4Q7Z3Z4 852 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 CPEB2Q7Z5Q1 589 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 CPNE9Q8IYJ1 553 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 TRIM58Q8NG06 486 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 MCOLN3Q8TDD5 553 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 GPR21Q99679 349 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 VN1R1Q9GZP7 353 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 RUBCNLQ9H714 662 aa14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 XAB2Q9HCS7 855 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-208ENST00000431611 CCDC177Q9NQR7 707 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms