RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 DLGAP2Q9P1A6 1054 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 MARCH4Q9P2E8 410 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 EPS15L1Q9UBC2 864 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 ARHGAP26Q9UNA1 814 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 NAALADL1Q9UQQ1 740 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 GINS2Q9Y248 185 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 KIF3AQ9Y496 699 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZFP37Q9Y6Q3 630 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 MYH9P35579 1960 aaKnown RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 C2orf16Q68DN1 1984 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZMYM6O95789 1325 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 GSTTP1A0A1W2PQM5 241 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 KANSL1LA0AUZ9 987 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 FAM90A26D6RGX4 464 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 H0YHG0 523 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 ANKRD28O15084 1053 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 KCNN4O15554 427 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 NKX2-2O95096 273 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 PROS1P07225 676 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 RETP07949 1114 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 PATE4P0C8F1 98 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 EPCAMP16422 314 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZNF23P17027 643 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 UGT1A1P22309 533 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 PAX3P23760 479 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 AHRP35869 848 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 TAF6P49848 677 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 TUBP50607 506 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 SARNPP82979 210 aaKnown RBP4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 CSTF1Q05048 431 aaKnown RBP4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 CXorf66Q5JRM2 361 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 WDR38Q5JTN6 314 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 CDC73Q6P1J9 531 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 PLEKHM3Q6ZWE6 761 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 KRTAP7-1Q8IUC3 87 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 SMC5Q8IY18 1101 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 MAML2Q8IZL2 1156 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZNF248Q8NDW4 579 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 EVI5LQ96CN4 794 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 TIGD1Q96MW7 591 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 KLHL5Q96PQ7 755 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 PAIP1Q9H074 479 aaKnown RBP4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZBP1Q9H171 429 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 OR14J1Q9UGF5 321 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 SLC13A4Q9UKG4 626 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 DOCK8Q8NF50 2099 aa4.5□□□□□ -1.69
HMGB3P5-201ENST00000428894 FRMPD4Q14CM0 1322 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 GPR179Q6PRD1 2367 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 A0A1B0GU03 582 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 TMEM8BA6NDV4 472 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 ATP9AO75110 1047 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 TBX6O95947 436 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 FAM200BP0CF97 657 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 LAMP2P13473 410 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 TMOD1P28289 359 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 EPHA8P29322 1005 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 CASQ1P31415 396 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 RPS9P46781 194 aaKnown RBP4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 HARS2P49590 506 aaKnown RBP4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 CLCN4P51793 760 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 HAND2P61296 217 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 HSP90B2PQ58FF3 399 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 ECHDC2Q86YB7 292 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 ESX1Q8N693 406 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 MYRIPQ8NFW9 859 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 PHF21AQ96BD5 680 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 SDF4Q9BRK5 362 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 UBAC1Q9BSL1 405 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 KRT23Q9C075 422 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 DCTPP1Q9H773 170 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 WASH6PQ9NQA3 447 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 MRPL17Q9NRX2 175 aaKnown RBP4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 ABI3Q9P2A4 366 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZNF624Q9P2J8 865 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 CNOT8Q9UFF9 292 aaKnown RBP4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 KCNK7Q9Y2U2 307 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 COL1A2P08123 1366 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 PATJQ8NI35 1801 aa4.49□□□□□ -1.69
HMGB3P5-201ENST00000428894 CLUHO75153 1309 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 IGKV3D-15A0A087WSY6 115 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 C1orf226A1L170 272 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 OR5K3A6NET4 321 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 ANHXE9PGG2 379 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 MAGEB2O15479 319 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 CIDEAO60543 219 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 BAG4O95429 457 aaKnown RBP4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 GLULP15104 373 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 PAX7P23759 505 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 CHRNB4P30926 498 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 PBX3P40426 434 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 PEX19P40855 299 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 LIMK1P53667 647 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 DHX8Q14562 1220 aaKnown RBP4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 MLF2Q15773 248 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 IMMTQ16891 758 aaKnown RBP4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 KRTCAP3Q53RY4 240 aa4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 N4BP2L1Q5TBK1 243 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 INO80CQ6PI98 192 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 PAPD4Q6PIY7 484 aaKnown RBP4.48□□□□□ -1.69
HMGB3P5-201ENST00000428894 FAM228AQ86W67 206 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms