RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 EIF3FO00303 357 aaPredicted RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 ZNF195O14628 629 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 TO15178 435 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 HDAC3O15379 428 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 MTRF1O75570 445 aaKnown RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 POP4O95707 220 aaKnown RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 TRUB2O95900 331 aaKnown RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 HOXC4P09017 264 aaPredicted RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 XBP1P17861 261 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 KLK2P20151 261 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 ELAVL4P26378 380 aaKnown RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 PDHA2P29803 388 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 NKX2-1P43699 371 aaPredicted RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 MYL7Q01449 175 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 PRKAA1Q13131 559 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 ZNF177Q13360 481 aaPredicted RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 ELFN2Q5R3F8 820 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 NCEH1Q6PIU2 408 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 H1FOOQ8IZA3 346 aaPredicted RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 APOBEC4Q8WW27 367 aaKnown RBP0.92□□□□□ -2.26
CEP290-208ENST00000604024 ZIM3Q96PE6 472 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 ZNF577Q9BSK1 485 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 HGH1Q9BTY7 390 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 A4GALTQ9NPC4 353 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 LNPEPQ9UIQ6 1025 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 PNMA2Q9UL42 364 aa0.92□□□□□ -2.26
CEP290-208ENST00000604024 PRSS51A0A1B0GVH4 220 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 A0A1W2PPH5 198 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 NPIPB15A6NHN6 443 aaPredicted RBP0.91□□□□□ -2.26
CEP290-208ENST00000604024 SSX4O60224 188 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 HS6ST1O60243 411 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 WDPCPO95876 746 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 IGKV3-11P04433 115 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 SRPRAP08240 638 aaKnown RBP0.91□□□□□ -2.26
CEP290-208ENST00000604024 ACP2P11117 423 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 EDNRAP25101 427 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 GIFP27352 417 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 CSTF2P33240 577 aaKnown RBP eCLIP0.91□□□□□ -2.26
CEP290-208ENST00000604024 GGT5P36269 586 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 HALP42357 657 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 RPS3AP61247 264 aaKnown RBP0.91□□□□□ -2.26
CEP290-208ENST00000604024 NDPQ00604 133 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 PLA2G7Q13093 441 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 ITPRIPL2Q3MIP1 535 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.91□□□□□ -2.26
CEP290-208ENST00000604024 RAD9AQ99638 391 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 MGME1Q9BQP7 344 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 NYXQ9GZU5 481 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 KCNMB3Q9NPA1 279 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 SPHK2Q9NRA0 654 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 RRP7BPQ9NSQ0 103 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 STK26Q9P289 416 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 R3HDM2Q9Y2K5 976 aaKnown RBP0.91□□□□□ -2.26
CEP290-208ENST00000604024 NAALAD2Q9Y3Q0 740 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 CMAHPQ9Y471 501 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 ABCC9O60706 1549 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 FAM168BA1KXE4 195 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 NKX6-3A6NJ46 265 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 PI4K2BG5E9Z4 385 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 OGTO15294 1046 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 OR10H2O60403 315 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 NXPH4O95158 308 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 PKLRP30613 574 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 CDK3Q00526 305 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 ODF4Q2M2E3 257 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 SLC9C2Q5TAH2 1124 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 UGT3A1Q6NUS8 523 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 BTN2A1Q7KYR7 527 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 AVL9Q8NBF6 648 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 BEST4Q8NFU0 473 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 RHOXF1Q8NHV9 184 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 NSMAFQ92636 917 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 CEP295NLQ96MC4 621 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 KIFC3Q9BVG8 833 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 TTYH1Q9H313 450 aaPredicted RBP0.91□□□□□ -2.26
CEP290-208ENST00000604024 PDFQ9HBH1 243 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 MKLN1Q9UL63 735 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 RIPK3Q9Y572 518 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 COMMD10Q9Y6G5 202 aa0.91□□□□□ -2.26
CEP290-208ENST00000604024 RSPH10B2B2RC85 870 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 SHISA9B4DS77 424 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 TSPAN1O60635 241 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 THY1P04216 161 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 RSPH10BP0C881 870 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 FAM200BP0CF97 657 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 PCP11498 1178 aaKnown RBP0.9□□□□□ -2.26
CEP290-208ENST00000604024 CDH18Q13634 790 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 TRIM29Q14134 588 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 AGAP7PQ5VUJ5 663 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 C11orf63Q6NUN7 778 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 CATSPER3Q86XQ3 398 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 ZC3H3Q8IXZ2 948 aaKnown RBP0.9□□□□□ -2.26
CEP290-208ENST00000604024 NDUFAF2Q8N183 169 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 VPS37AQ8NEZ2 397 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 EXD1Q8NHP7 514 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 METTL6Q8TCB7 284 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 ZNF799Q96GE5 643 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 APOL2Q9BQE5 337 aa0.9□□□□□ -2.26
CEP290-208ENST00000604024 CHMP1AQ9HD42 196 aaPredicted RBP0.9□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms