RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 CDC6P09119 513 aa5.82□□□□□ -1.48
snR56snR56 STE11P23561 717 aa5.82□□□□□ -1.48
snR56snR56 HCM1P25364 564 aa5.82□□□□□ -1.48
snR56snR56 LST4P34239 828 aa5.82□□□□□ -1.48
snR56snR56 ALG3P38179 458 aa5.82□□□□□ -1.48
snR56snR56 YHL050CP38721 697 aa5.82□□□□□ -1.48
snR56snR56 YHR219WP38900 624 aa5.82□□□□□ -1.48
snR56snR56 DAK2P43550 591 aa5.82□□□□□ -1.48
snR56snR56 CMP2P14747 604 aa5.81□□□□□ -1.48
snR56snR56 MNN10P50108 393 aaKnown RBP5.81□□□□□ -1.48
snR56snR56 SUN4P53616 420 aa5.81□□□□□ -1.48
snR56snR56 RSM24Q03976 319 aa5.81□□□□□ -1.48
snR56snR56 RXT3Q07458 294 aa5.81□□□□□ -1.48
snR56snR56 ACK1Q07622 623 aaPredicted RBP5.81□□□□□ -1.48
snR56snR56 NTO1Q12311 748 aa5.81□□□□□ -1.48
snR56snR56 TMA10Q06177 86 aa5.8□□□□□ -1.48
snR56snR56 YPL260WQ08977 551 aa5.8□□□□□ -1.48
snR56snR56 RFC5P38251 354 aa5.79□□□□□ -1.48
snR56snR56 MCM6P53091 1017 aaKnown RBP5.79□□□□□ -1.48
snR56snR56 GPB1Q08886 897 aa5.79□□□□□ -1.48
snR56snR56 RIB2Q12362 591 aaKnown RBP5.79□□□□□ -1.48
snR56snR56 MET4P32389 672 aa5.78□□□□□ -1.48
snR56snR56 FAA3P39002 694 aa5.78□□□□□ -1.48
snR56snR56 PIC2P40035 300 aa5.78□□□□□ -1.48
snR56snR56 OXR1Q08952 273 aa5.78□□□□□ -1.48
snR56snR56 DED1P06634 604 aaKnown RBP5.77□□□□□ -1.49
snR56snR56 PMI40P29952 429 aaKnown RBP5.77□□□□□ -1.49
snR56snR56 YFL054CP43549 646 aa5.77□□□□□ -1.49
snR56snR56 PHO23P50947 330 aa5.76□□□□□ -1.49
snR56snR56 VPS62P53285 467 aa5.76□□□□□ -1.49
snR56snR56 CTF4Q01454 927 aa5.76□□□□□ -1.49
snR56snR56 HXK1P04806 485 aaKnown RBP5.75□□□□□ -1.49
snR56snR56 TAF13P11747 167 aa5.75□□□□□ -1.49
snR56snR56 GEF1P37020 779 aa5.75□□□□□ -1.49
snR56snR56 CHS7P38843 316 aa5.75□□□□□ -1.49
snR56snR56 PBP1P53297 722 aaKnown RBP5.75□□□□□ -1.49
snR56snR56 AIM21P40563 679 aa5.74□□□□□ -1.49
snR56snR56 RAT1Q02792 1006 aaKnown RBP5.74□□□□□ -1.49
snR56snR56 PMA1P05030 918 aaKnown RBP5.73□□□□□ -1.49
snR56snR56 PPX1P38698 397 aa5.73□□□□□ -1.49
snR56snR56 YAP6Q03935 383 aa5.73□□□□□ -1.49
snR56snR56 SIZ1Q04195 904 aa5.73□□□□□ -1.49
snR56snR56 VTS1Q08831 523 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
snR56snR56 RAD53P22216 821 aa5.72□□□□□ -1.49
snR56snR56 ROD1Q02805 837 aa5.72□□□□□ -1.49
snR56snR56 YLR224WQ05947 369 aa5.72□□□□□ -1.49
snR56snR56 SVS1Q12254 260 aa5.72□□□□□ -1.49
snR56snR56 KIN2P13186 1147 aaKnown RBP5.71□□□□□ -1.5
snR56snR56 MAP1Q01662 387 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
snR56snR56 URN1Q06525 465 aaKnown RBP5.71□□□□□ -1.5
snR56snR56 HMI1Q12039 706 aa5.71□□□□□ -1.5
snR56snR56 EMC1P25574 760 aa5.7□□□□□ -1.5
snR56snR56 APL1P27351 700 aa5.7□□□□□ -1.5
snR56snR56 DCG1P32460 244 aa5.7□□□□□ -1.5
snR56snR56 YER152CP10356 443 aa5.69□□□□□ -1.5
snR56snR56 MKK2P32491 506 aa5.69□□□□□ -1.5
snR56snR56 DEF1P35732 738 aaKnown RBP5.69□□□□□ -1.5
snR56snR56 GTF1P53260 183 aaPredicted RBP5.69□□□□□ -1.5
snR56snR56 ATG13Q06628 738 aa5.69□□□□□ -1.5
snR56snR56 WHI5Q12416 295 aa5.69□□□□□ -1.5
snR56snR56 RGD1P38339 666 aa5.68□□□□□ -1.5
snR56snR56 SIW14P53965 281 aa5.68□□□□□ -1.5
snR56snR56 KIN4Q01919 800 aa5.68□□□□□ -1.5
snR56snR56 HXT13P39924 564 aa5.67□□□□□ -1.5
snR56snR56 ENT3P47160 408 aa5.67□□□□□ -1.5
snR56snR56 GCV2P49095 1034 aa5.67□□□□□ -1.5
snR56snR56 HXT17P53631 564 aa5.67□□□□□ -1.5
snR56snR56 HXT15P54854 567 aa5.67□□□□□ -1.5
snR56snR56 YML122CQ03207 126 aa5.67□□□□□ -1.5
snR56snR56 RPT1P33299 467 aaKnown RBP5.66□□□□□ -1.5
snR56snR56 MSS4P38994 779 aa5.66□□□□□ -1.5
snR56snR56 MSC2Q03455 724 aa5.66□□□□□ -1.5
snR56snR56 NOP12Q08208 459 aaKnown RBP5.66□□□□□ -1.5
snR56snR56 MSC6Q08818 692 aaKnown RBP5.66□□□□□ -1.5
snR56snR56 SIP5P40210 489 aaKnown RBP5.65□□□□□ -1.5
snR56snR56 PRE9P23638 258 aaKnown RBP5.64□□□□□ -1.51
snR56snR56 MLS1P30952 554 aa5.64□□□□□ -1.51
snR56snR56 SSF1P38789 453 aaPredicted RBP5.64□□□□□ -1.51
snR56snR56 GNP1P48813 663 aa5.64□□□□□ -1.51
snR56snR56 MCD1Q12158 566 aa5.64□□□□□ -1.51
snR56snR56 STM1P39015 273 aaKnown RBP5.63□□□□□ -1.51
snR56snR56 PLB1P39105 664 aa5.63□□□□□ -1.51
snR56snR56 MRPS18P42847 217 aa5.63□□□□□ -1.51
snR56snR56 SYP1P25623 870 aaKnown RBP5.62□□□□□ -1.51
snR56snR56 SEC8P32855 1065 aa5.62□□□□□ -1.51
snR56snR56 YGR122WP53272 402 aa5.62□□□□□ -1.51
snR56snR56 ACE2P21192 770 aa5.61□□□□□ -1.51
snR56snR56 BAS1P22035 811 aa5.61□□□□□ -1.51
snR56snR56 THI12P42883 340 aa5.61□□□□□ -1.51
snR56snR56 THI5P43534 340 aa5.61□□□□□ -1.51
snR56snR56 CNN1P43618 361 aa5.61□□□□□ -1.51
snR56snR56 THI11P47183 340 aa5.61□□□□□ -1.51
snR56snR56 THI13Q07748 340 aa5.61□□□□□ -1.51
snR56snR56 DBP5P20449 482 aaKnown RBP5.6□□□□□ -1.51
snR56snR56 PEP7P32609 515 aa5.6□□□□□ -1.51
snR56snR56 MPH1P40562 993 aa5.6□□□□□ -1.51
snR56snR56 MND2P40577 368 aa5.6□□□□□ -1.51
snR56snR56 TPO1Q07824 586 aa5.59□□□□□ -1.51
snR56snR56 PPM2Q08282 695 aa5.59□□□□□ -1.51
snR56snR56 MET12P46151 657 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms