RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeast

Gene CSM4, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM4	YPL200W	AIM26	P32858	118 aa		4.92	□□□□□ -1.62
CSM4	YPL200W	MNR2	P35724	969 aa		4.92	□□□□□ -1.62
CSM4	YPL200W	GPB2	P39717	880 aa		4.92	□□□□□ -1.62
CSM4	YPL200W	MRPL22	P53881	309 aa		4.92	□□□□□ -1.62
CSM4	YPL200W	YCR015C	P25616	317 aa		4.91	□□□□□ -1.62
CSM4	YPL200W	MDL2	P33311	773 aa		4.91	□□□□□ -1.62
CSM4	YPL200W	AIM3	P38266	947 aa	Known RBP	4.91	□□□□□ -1.62
CSM4	YPL200W	TIF35	Q04067	274 aa	Known RBP	4.91	□□□□□ -1.62
CSM4	YPL200W	RCL1	Q08096	367 aa	Predicted RBP	4.91	□□□□□ -1.62
CSM4	YPL200W	TMA46	Q12000	345 aa	Known RBP	4.91	□□□□□ -1.62
CSM4	YPL200W	YDL177C	Q12257	170 aa		4.91	□□□□□ -1.62
CSM4	YPL200W	DBP5	P20449	482 aa	Known RBP	4.9	□□□□□ -1.63
CSM4	YPL200W	MLS1	P30952	554 aa		4.9	□□□□□ -1.63
CSM4	YPL200W	RGD1	P38339	666 aa		4.9	□□□□□ -1.63
CSM4	YPL200W	MET10	P39692	1035 aa		4.9	□□□□□ -1.63
CSM4	YPL200W	CNN1	P43618	361 aa		4.9	□□□□□ -1.63
CSM4	YPL200W	SNU71	P53207	620 aa	Known RBP	4.9	□□□□□ -1.63
CSM4	YPL200W	EEB1	Q02891	456 aa		4.9	□□□□□ -1.63
CSM4	YPL200W	SPO21	Q12411	609 aa		4.9	□□□□□ -1.63
CSM4	YPL200W	PRP6	P19735	899 aa	Predicted RBP	4.89	□□□□□ -1.63
CSM4	YPL200W	SRO9	P25567	434 aa	Known RBP	4.89	□□□□□ -1.63
CSM4	YPL200W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
CSM4	YPL200W	SVF1	Q05515	481 aa		4.89	□□□□□ -1.63
CSM4	YPL200W	JIP5	Q06214	492 aa	Predicted RBP	4.89	□□□□□ -1.63
CSM4	YPL200W	YPL260W	Q08977	551 aa		4.89	□□□□□ -1.63
CSM4	YPL200W	YER152C	P10356	443 aa		4.88	□□□□□ -1.63
CSM4	YPL200W	BAP2	P38084	609 aa		4.88	□□□□□ -1.63
CSM4	YPL200W	GIP4	P39732	760 aa		4.88	□□□□□ -1.63
CSM4	YPL200W	RPN3	P40016	523 aa	Known RBP	4.88	□□□□□ -1.63
CSM4	YPL200W	MPH1	P40562	993 aa		4.88	□□□□□ -1.63
CSM4	YPL200W	HOS3	Q02959	697 aa	Known RBP	4.88	□□□□□ -1.63
CSM4	YPL200W	NBA1	Q08229	501 aa	Known RBP	4.88	□□□□□ -1.63
CSM4	YPL200W	TRP2	P00899	507 aa	Known RBP	4.87	□□□□□ -1.63
CSM4	YPL200W	SNF5	P18480	905 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	LYP1	P32487	611 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	THI80	P35202	319 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	TAF1	P46677	1066 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	FAA4	P47912	694 aa	Known RBP	4.87	□□□□□ -1.63
CSM4	YPL200W	YGR053C	P53234	283 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	TNA1	P53322	534 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	SNO2	P53823	222 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	VPS16	Q03308	798 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	RSC58	Q07979	502 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	YOR352W	Q08816	343 aa		4.87	□□□□□ -1.63
CSM4	YPL200W	COQ4	O13525	335 aa		4.86	□□□□□ -1.63
CSM4	YPL200W	PAM1	P37304	830 aa	Known RBP	4.86	□□□□□ -1.63
CSM4	YPL200W	MCM7	P38132	845 aa		4.86	□□□□□ -1.63
CSM4	YPL200W	YFL054C	P43549	646 aa		4.86	□□□□□ -1.63
CSM4	YPL200W	TYW3	P53177	273 aa		4.86	□□□□□ -1.63
CSM4	YPL200W	RIM8	P53179	542 aa		4.86	□□□□□ -1.63
CSM4	YPL200W	PIN2	Q12057	282 aa		4.86	□□□□□ -1.63
CSM4	YPL200W	SPS1	P08458	490 aa		4.85	□□□□□ -1.63
CSM4	YPL200W	CLN2	P20438	545 aa		4.85	□□□□□ -1.63
CSM4	YPL200W	NAP1	P25293	417 aa	Known RBP	4.85	□□□□□ -1.63
CSM4	YPL200W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
CSM4	YPL200W	MOT2	P34909	587 aa	Known RBP	4.85	□□□□□ -1.63
CSM4	YPL200W	MAD1	P40957	749 aa		4.85	□□□□□ -1.63
CSM4	YPL200W	HNT2	P49775	206 aa		4.85	□□□□□ -1.63
CSM4	YPL200W	GDE1	Q02979	1223 aa		4.85	□□□□□ -1.63
CSM4	YPL200W	RPS13	P05756	151 aa	Known RBP	4.84	□□□□□ -1.63
CSM4	YPL200W	TOD6	P34219	525 aa		4.84	□□□□□ -1.63
CSM4	YPL200W	FLR1	P38124	548 aa		4.84	□□□□□ -1.63
CSM4	YPL200W	CCZ1	P38273	704 aa		4.84	□□□□□ -1.63
CSM4	YPL200W	PIK1	P39104	1066 aa		4.84	□□□□□ -1.63
CSM4	YPL200W	INO1	P11986	533 aa		4.83	□□□□□ -1.64
CSM4	YPL200W	MXR1	P40029	184 aa		4.83	□□□□□ -1.64
CSM4	YPL200W	YLR225C	Q05948	407 aa	Known RBP	4.83	□□□□□ -1.64
CSM4	YPL200W	RSB1	Q08417	382 aa		4.83	□□□□□ -1.64
CSM4	YPL200W	YPL277C	Q08989	487 aa		4.83	□□□□□ -1.64
CSM4	YPL200W	GNT1	Q12096	491 aa		4.83	□□□□□ -1.64
CSM4	YPL200W	YPL066W	Q12194	479 aa		4.83	□□□□□ -1.64
CSM4	YPL200W	SOD2	P00447	233 aa		4.82	□□□□□ -1.64
CSM4	YPL200W	RPL11A	P0C0W9	174 aa	Known RBP	4.82	□□□□□ -1.64
CSM4	YPL200W	DBP2	P24783	546 aa	Known RBP	4.82	□□□□□ -1.64
CSM4	YPL200W	CWC24	P53769	259 aa		4.82	□□□□□ -1.64
CSM4	YPL200W	ESC2	Q06340	456 aa		4.82	□□□□□ -1.64
CSM4	YPL200W	RPL11B	Q3E757	174 aa	Predicted RBP	4.82	□□□□□ -1.64
CSM4	YPL200W	ABZ1	P37254	787 aa	Predicted RBP	4.81	□□□□□ -1.64
CSM4	YPL200W	YGL176C	P46945	554 aa		4.81	□□□□□ -1.64
CSM4	YPL200W	SPO20	Q04359	397 aa		4.81	□□□□□ -1.64
CSM4	YPL200W	RKM4	Q12504	494 aa		4.81	□□□□□ -1.64
CSM4	YPL200W	BAS1	P22035	811 aa		4.8	□□□□□ -1.64
CSM4	YPL200W	PNT1	P38969	423 aa		4.8	□□□□□ -1.64
CSM4	YPL200W	VAC8	P39968	578 aa		4.8	□□□□□ -1.64
CSM4	YPL200W	SEC26	P41810	973 aa	Known RBP	4.8	□□□□□ -1.64
CSM4	YPL200W	ENV11	P53246	860 aa		4.8	□□□□□ -1.64
CSM4	YPL200W	ALD6	P54115	500 aa	Known RBP	4.8	□□□□□ -1.64
CSM4	YPL200W	ABD1	P32783	436 aa	Predicted RBP	4.79	□□□□□ -1.64
CSM4	YPL200W	YKL107W	P34251	309 aa		4.79	□□□□□ -1.64
CSM4	YPL200W	SIP5	P40210	489 aa	Known RBP	4.79	□□□□□ -1.64
CSM4	YPL200W	SPP382	Q06411	708 aa	Predicted RBP	4.79	□□□□□ -1.64
CSM4	YPL200W	OPI10	Q08202	246 aa		4.79	□□□□□ -1.64
CSM4	YPL200W	FAL1	Q12099	399 aa	Known RBP	4.79	□□□□□ -1.64
CSM4	YPL200W	PRI2	P20457	528 aa		4.78	□□□□□ -1.64
CSM4	YPL200W	SPT20	P50875	604 aa		4.78	□□□□□ -1.64
CSM4	YPL200W	AGP1	P25376	633 aa		4.77	□□□□□ -1.65
CSM4	YPL200W	SLA2	P33338	968 aa		4.77	□□□□□ -1.65
CSM4	YPL200W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
CSM4	YPL200W	YKL069W	P36088	180 aa		4.77	□□□□□ -1.65
CSM4	YPL200W	UGA2	P38067	497 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms