RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR9YOL145C LYS5P50113 272 aa2.3□□□□□ -2.04
CTR9YOL145C YLR346CQ06139 101 aa2.3□□□□□ -2.04
CTR9YOL145C REI1P38344 393 aaPredicted RBP2.3□□□□□ -2.04
CTR9YOL145C POL5P39985 1022 aaKnown RBP2.3□□□□□ -2.04
CTR9YOL145C MXR1P40029 184 aa2.3□□□□□ -2.04
CTR9YOL145C GUP1P53154 560 aa2.3□□□□□ -2.04
CTR9YOL145C YGR045CP53229 120 aa2.3□□□□□ -2.04
CTR9YOL145C MEC3Q02574 474 aa2.3□□□□□ -2.04
CTR9YOL145C YDR306CQ06640 478 aa2.3□□□□□ -2.04
CTR9YOL145C PTC5Q12511 572 aa2.3□□□□□ -2.04
CTR9YOL145C AFR1P33304 620 aa2.3□□□□□ -2.04
CTR9YOL145C PIN4P34217 668 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
CTR9YOL145C GPB2P39717 880 aa2.3□□□□□ -2.04
CTR9YOL145C YJR120WP47157 116 aa2.3□□□□□ -2.04
CTR9YOL145C FOL1P53848 824 aa2.3□□□□□ -2.04
CTR9YOL145C YDL124WQ07551 312 aaKnown RBP2.3□□□□□ -2.04
CTR9YOL145C YOL057WQ08225 711 aa2.3□□□□□ -2.04
CTR9YOL145C PDC5P16467 563 aaKnown RBP2.29□□□□□ -2.04
CTR9YOL145C GPG1P53130 126 aa2.29□□□□□ -2.04
CTR9YOL145C ELA1P53861 379 aaPredicted RBP2.29□□□□□ -2.04
CTR9YOL145C GIS4Q04233 774 aa2.29□□□□□ -2.04
CTR9YOL145C LCB5Q06147 687 aaKnown RBP2.29□□□□□ -2.04
CTR9YOL145C GPM1P00950 247 aaKnown RBP2.29□□□□□ -2.04
CTR9YOL145C NPP1P25353 742 aa2.29□□□□□ -2.04
CTR9YOL145C GBP2P25555 427 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
CTR9YOL145C PEX6P33760 1030 aa2.29□□□□□ -2.04
CTR9YOL145C YKL151CP36059 337 aa2.29□□□□□ -2.04
CTR9YOL145C PNT1P38969 423 aa2.29□□□□□ -2.04
CTR9YOL145C CEM1P39525 442 aa2.29□□□□□ -2.04
CTR9YOL145C YAR028WP39548 234 aa2.29□□□□□ -2.04
CTR9YOL145C SEC26P41810 973 aaKnown RBP2.29□□□□□ -2.04
CTR9YOL145C GUS1P46655 708 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
CTR9YOL145C TY4A-JP47023 414 aa2.29□□□□□ -2.04
CTR9YOL145C YDR444WQ04093 687 aa2.29□□□□□ -2.04
CTR9YOL145C PRP9P19736 530 aaKnown RBP2.29□□□□□ -2.04
CTR9YOL145C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
CTR9YOL145C RGD1P38339 666 aa2.29□□□□□ -2.04
CTR9YOL145C GCV1P48015 400 aa2.29□□□□□ -2.04
CTR9YOL145C CAF120P53836 1060 aa2.29□□□□□ -2.04
CTR9YOL145C BUL2Q03758 920 aaKnown RBP2.29□□□□□ -2.04
CTR9YOL145C RKM2Q03942 479 aa2.29□□□□□ -2.04
CTR9YOL145C YLR001CQ07895 862 aa2.29□□□□□ -2.04
CTR9YOL145C RPP1AP05318 106 aaPredicted RBP2.28□□□□□ -2.04
CTR9YOL145C TOM70P07213 617 aaKnown RBP2.28□□□□□ -2.04
CTR9YOL145C VBA3P25594 458 aa2.28□□□□□ -2.04
CTR9YOL145C MDJ1P35191 511 aa2.28□□□□□ -2.04
CTR9YOL145C PGM2P37012 569 aaKnown RBP2.28□□□□□ -2.04
CTR9YOL145C UBP6P43593 499 aaKnown RBP2.28□□□□□ -2.04
CTR9YOL145C HNT2P49775 206 aa2.28□□□□□ -2.04
CTR9YOL145C KIP3P53086 805 aaKnown RBP2.28□□□□□ -2.04
CTR9YOL145C UTP14Q04500 899 aaKnown RBP2.28□□□□□ -2.04
CTR9YOL145C ELG1Q12050 791 aa2.28□□□□□ -2.04
CTR9YOL145C GNT1Q12096 491 aa2.28□□□□□ -2.04
CTR9YOL145C RPL11AP0C0W9 174 aaKnown RBP2.28□□□□□ -2.04
CTR9YOL145C KIP1P28742 1111 aa2.28□□□□□ -2.04
CTR9YOL145C PET10P36139 283 aa2.28□□□□□ -2.04
CTR9YOL145C ACO2P39533 789 aa2.28□□□□□ -2.04
CTR9YOL145C NPP2P39997 493 aa2.28□□□□□ -2.04
CTR9YOL145C YNL193WP53870 558 aa2.28□□□□□ -2.04
CTR9YOL145C UGO1Q03327 502 aa2.28□□□□□ -2.04
CTR9YOL145C HRQ1Q05549 1077 aa2.28□□□□□ -2.04
CTR9YOL145C DUS3Q06053 668 aaKnown RBP2.28□□□□□ -2.04
CTR9YOL145C SPP382Q06411 708 aaPredicted RBP2.28□□□□□ -2.04
CTR9YOL145C GIC2Q06648 383 aa2.28□□□□□ -2.04
CTR9YOL145C RPL11BQ3E757 174 aaPredicted RBP2.28□□□□□ -2.04
CTR9YOL145C NFS1P25374 497 aa2.27□□□□□ -2.05
CTR9YOL145C ARL1P38116 183 aaKnown RBP2.27□□□□□ -2.05
CTR9YOL145C QNS1P38795 714 aaKnown RBP2.27□□□□□ -2.05
CTR9YOL145C DSS1P39112 969 aa2.27□□□□□ -2.05
CTR9YOL145C NUG1P40010 520 aaKnown RBP2.27□□□□□ -2.05
CTR9YOL145C YMR074CQ04773 145 aa2.27□□□□□ -2.05
CTR9YOL145C TMA17Q12513 150 aa2.27□□□□□ -2.05
CTR9YOL145C MDM12Q92328 271 aa2.27□□□□□ -2.05
CTR9YOL145C TY4B-PA0A0B7P3V8 1104 aa2.27□□□□□ -2.05
CTR9YOL145C CDC9P04819 755 aa2.27□□□□□ -2.05
CTR9YOL145C RET1P22276 1149 aaKnown RBP2.27□□□□□ -2.05
CTR9YOL145C AAR2P32357 355 aaPredicted RBP2.27□□□□□ -2.05
CTR9YOL145C ALG14P38242 237 aa2.27□□□□□ -2.05
CTR9YOL145C ENP1P38333 483 aaKnown RBP2.27□□□□□ -2.05
CTR9YOL145C TOK1P40310 691 aa2.27□□□□□ -2.05
CTR9YOL145C GYP8P43570 497 aa2.27□□□□□ -2.05
CTR9YOL145C YGL081WP53156 320 aa2.27□□□□□ -2.05
CTR9YOL145C GCR2Q01722 534 aa2.27□□□□□ -2.05
CTR9YOL145C RSA3Q05942 220 aaKnown RBP2.27□□□□□ -2.05
CTR9YOL145C SPO21Q12411 609 aa2.27□□□□□ -2.05
CTR9YOL145C TY4A-HQ6Q5P6 413 aa2.27□□□□□ -2.05
CTR9YOL145C KNS1P32350 737 aaPredicted RBP2.27□□□□□ -2.05
CTR9YOL145C SFP1P32432 683 aa2.27□□□□□ -2.05
CTR9YOL145C LEM3P42838 414 aa2.27□□□□□ -2.05
CTR9YOL145C HLJ1P48353 224 aa2.27□□□□□ -2.05
CTR9YOL145C YGR237CP50089 785 aa2.27□□□□□ -2.05
CTR9YOL145C ALO1P54783 526 aaKnown RBP2.27□□□□□ -2.05
CTR9YOL145C THI73Q07904 523 aa2.27□□□□□ -2.05
CTR9YOL145C GAS5Q08193 484 aa2.27□□□□□ -2.05
CTR9YOL145C AVO1Q08236 1176 aa2.27□□□□□ -2.05
CTR9YOL145C PHR1P05066 565 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
CTR9YOL145C PPH3P32345 308 aa2.26□□□□□ -2.05
CTR9YOL145C DOM34P33309 386 aa2.26□□□□□ -2.05
CTR9YOL145C YRO2P38079 344 aa2.26□□□□□ -2.05
CTR9YOL145C PMC1P38929 1173 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms