RNA–Protein interactions for RNA: YNL147W

LSM7, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM7, Length 348 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM7	YNL147W	SLS1	P42900	643 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	IOC3	P43596	787 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	CNN1	P43618	361 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	SPO74	P45819	413 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	ECL1	P48235	211 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	ERP6	P53198	216 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	HXT17	P53631	564 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	HXT15	P54854	567 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	YOR223W	Q12015	292 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	TY1A-GR1	Q12085	440 aa		3.11	□□□□□ -1.91
LSM7	YNL147W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.11	□□□□□ -1.91
LSM7	YNL147W	TY1A-OL	Q92392	440 aa	Known RBP	3.11	□□□□□ -1.91
LSM7	YNL147W	CYC7	P00045	113 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	HSP60	P19882	572 aa	Known RBP	3.1	□□□□□ -1.91
LSM7	YNL147W	NNK1	P36003	928 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	MCM7	P38132	845 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	PBY1	P38254	753 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	RGD1	P38339	666 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	FPR3	P38911	411 aa	Known RBP	3.1	□□□□□ -1.91
LSM7	YNL147W	HUL4	P40985	892 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	HUL5	P53119	910 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	PRP43	P53131	767 aa	Known RBP	3.1	□□□□□ -1.91
LSM7	YNL147W	RNH70	P53331	553 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	YNR063W	P53749	607 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	HRK1	Q08732	759 aa	Known RBP	3.1	□□□□□ -1.91
LSM7	YNL147W	YPL260W	Q08977	551 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	REC8	Q12188	680 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	PTC5	Q12511	572 aa		3.1	□□□□□ -1.91
LSM7	YNL147W	HEM13	P11353	328 aa	Known RBP	3.09	□□□□□ -1.91
LSM7	YNL147W	GAL11	P19659	1081 aa		3.09	□□□□□ -1.91
LSM7	YNL147W	NFS1	P25374	497 aa		3.09	□□□□□ -1.91
LSM7	YNL147W	ABD1	P32783	436 aa	Predicted RBP	3.09	□□□□□ -1.91
LSM7	YNL147W	SEG2	P34250	1132 aa		3.09	□□□□□ -1.91
LSM7	YNL147W	YBR184W	P38299	523 aa		3.09	□□□□□ -1.91
LSM7	YNL147W	YGR125W	P53273	1036 aa		3.09	□□□□□ -1.91
LSM7	YNL147W	TIF35	Q04067	274 aa	Known RBP	3.09	□□□□□ -1.91
LSM7	YNL147W	DOT1	Q04089	582 aa	Known RBP	3.09	□□□□□ -1.91
LSM7	YNL147W	UTP14	Q04500	899 aa	Known RBP	3.09	□□□□□ -1.91
LSM7	YNL147W	EAF1	Q06337	982 aa		3.09	□□□□□ -1.91
LSM7	YNL147W	MET6	P05694	767 aa	Known RBP	3.08	□□□□□ -1.92
LSM7	YNL147W	ERS1	P17261	260 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	ARE1	P25628	610 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	CDC11	P32458	415 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	YKL069W	P36088	180 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	VBA5	P36172	582 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
LSM7	YNL147W	ALG3	P38179	458 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	YGL176C	P46945	554 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	KIP3	P53086	805 aa	Known RBP	3.08	□□□□□ -1.92
LSM7	YNL147W	YGR045C	P53229	120 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
LSM7	YNL147W	RAT1	Q02792	1006 aa	Known RBP	3.08	□□□□□ -1.92
LSM7	YNL147W	POB3	Q04636	552 aa	Known RBP	3.08	□□□□□ -1.92
LSM7	YNL147W	YLR225C	Q05948	407 aa	Known RBP	3.08	□□□□□ -1.92
LSM7	YNL147W	FLC1	Q08967	793 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	ALG6	Q12001	544 aa	Known RBP	3.08	□□□□□ -1.92
LSM7	YNL147W	GNT1	Q12096	491 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	YLR125W	Q12138	136 aa		3.08	□□□□□ -1.92
LSM7	YNL147W	CIT1	P00890	479 aa		3.07	□□□□□ -1.92
LSM7	YNL147W	CIT2	P08679	460 aa		3.07	□□□□□ -1.92
LSM7	YNL147W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	RIP-Chip
LSM7	YNL147W	RPL8B	P29453	256 aa	Known RBP	3.07	□□□□□ -1.92
LSM7	YNL147W	MLS1	P30952	554 aa		3.07	□□□□□ -1.92
LSM7	YNL147W	SMY2	P32909	740 aa	Known RBP	3.07	□□□□□ -1.92
LSM7	YNL147W	MOT2	P34909	587 aa	Known RBP	3.07	□□□□□ -1.92
LSM7	YNL147W	SPC42	P36094	363 aa		3.07	□□□□□ -1.92
LSM7	YNL147W	SEA4	P38164	1038 aa		3.07	□□□□□ -1.92
LSM7	YNL147W	QNS1	P38795	714 aa	Known RBP	3.07	□□□□□ -1.92
LSM7	YNL147W	TAT2	P38967	592 aa		3.07	□□□□□ -1.92
LSM7	YNL147W	BUD6	P41697	788 aa		3.07	□□□□□ -1.92
LSM7	YNL147W	ELA1	P53861	379 aa	Predicted RBP	3.07	□□□□□ -1.92
LSM7	YNL147W	SPP382	Q06411	708 aa	Predicted RBP	3.07	□□□□□ -1.92
LSM7	YNL147W	YDL124W	Q07551	312 aa	Known RBP	3.07	□□□□□ -1.92
LSM7	YNL147W	FMP25	Q08023	583 aa		3.07	□□□□□ -1.92
LSM7	YNL147W	PHO8	P11491	566 aa		3.06	□□□□□ -1.92
LSM7	YNL147W	RET1	P22276	1149 aa	Known RBP	3.06	□□□□□ -1.92
LSM7	YNL147W	RSP5	P39940	809 aa	Known RBP	3.06	□□□□□ -1.92
LSM7	YNL147W	NUP82	P40368	713 aa		3.06	□□□□□ -1.92
LSM7	YNL147W	MPH1	P40562	993 aa		3.06	□□□□□ -1.92
LSM7	YNL147W	TAF1	P46677	1066 aa		3.06	□□□□□ -1.92
LSM7	YNL147W	UTP8	P53276	713 aa	Known RBP	3.06	□□□□□ -1.92
LSM7	YNL147W	ALG12	P53730	551 aa		3.06	□□□□□ -1.92
LSM7	YNL147W	RSA3	Q05942	220 aa	Known RBP	3.06	□□□□□ -1.92
LSM7	YNL147W	YLR257W	Q06146	321 aa	Known RBP	3.06	□□□□□ -1.92
LSM7	YNL147W	SPO21	Q12411	609 aa		3.06	□□□□□ -1.92
LSM7	YNL147W	THS1	P04801	734 aa	Known RBP	3.05	□□□□□ -1.92
LSM7	YNL147W	THI4	P32318	326 aa		3.05	□□□□□ -1.92
LSM7	YNL147W	AFG2	P32794	780 aa		3.05	□□□□□ -1.92
LSM7	YNL147W	STE5	P32917	917 aa		3.05	□□□□□ -1.92
LSM7	YNL147W	YHR020W	P38708	688 aa	Known RBP	3.05	□□□□□ -1.92
LSM7	YNL147W	RPN3	P40016	523 aa	Known RBP	3.05	□□□□□ -1.92
LSM7	YNL147W	MSH4	P40965	878 aa	Predicted RBP	3.05	□□□□□ -1.92
LSM7	YNL147W	ALR2	P43553	858 aa		3.05	□□□□□ -1.92
LSM7	YNL147W	YGL081W	P53156	320 aa		3.05	□□□□□ -1.92
LSM7	YNL147W	NCE103	P53615	221 aa		3.05	□□□□□ -1.92
LSM7	YNL147W	SRP1	Q02821	542 aa	Known RBP	3.05	□□□□□ -1.92
LSM7	YNL147W	GSF2	Q04697	403 aa	Known RBP	3.05	□□□□□ -1.92
LSM7	YNL147W	YOR059C	Q08448	450 aa	Known RBP	3.05	□□□□□ -1.92
LSM7	YNL147W	TY1A-NL1	Q12391	440 aa	Known RBP	3.05	□□□□□ -1.92
LSM7	YNL147W	COQ4	O13525	335 aa		3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms