RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C AI1P03875 834 aa6.25□□□□□ -1.41
CUS1YMR240C RET1P22276 1149 aaKnown RBP6.25□□□□□ -1.41
CUS1YMR240C TIM23P32897 222 aa6.25□□□□□ -1.41
CUS1YMR240C NNK1P36003 928 aa6.25□□□□□ -1.41
CUS1YMR240C NCE103P53615 221 aa6.25□□□□□ -1.41
CUS1YMR240C YLR125WQ12138 136 aa6.25□□□□□ -1.41
CUS1YMR240C MET6P05694 767 aaKnown RBP6.24□□□□□ -1.41
CUS1YMR240C PHO8P11491 566 aa6.24□□□□□ -1.41
CUS1YMR240C ARE1P25628 610 aa6.24□□□□□ -1.41
CUS1YMR240C SFA1P32771 386 aa6.24□□□□□ -1.41
CUS1YMR240C MBP1P39678 833 aa6.24□□□□□ -1.41
CUS1YMR240C BOI2P39969 1040 aa6.24□□□□□ -1.41
CUS1YMR240C SIP5P40210 489 aaKnown RBP6.24□□□□□ -1.41
CUS1YMR240C CAN1P04817 590 aa6.23□□□□□ -1.41
CUS1YMR240C NFS1P25374 497 aa6.23□□□□□ -1.41
CUS1YMR240C SCT1P32784 759 aa6.23□□□□□ -1.41
CUS1YMR240C SMY2P32909 740 aaKnown RBP6.23□□□□□ -1.41
CUS1YMR240C HUL4P40985 892 aa6.23□□□□□ -1.41
CUS1YMR240C KIP1P28742 1111 aa6.22□□□□□ -1.41
CUS1YMR240C GPT2P36148 743 aa6.22□□□□□ -1.41
CUS1YMR240C MSH4P40965 878 aaPredicted RBP6.22□□□□□ -1.41
CUS1YMR240C ALR2P43553 858 aa6.22□□□□□ -1.41
CUS1YMR240C YNR014WP53719 212 aa6.22□□□□□ -1.41
CUS1YMR240C TAF8Q03750 510 aa6.22□□□□□ -1.41
CUS1YMR240C YLR257WQ06146 321 aaKnown RBP6.22□□□□□ -1.41
CUS1YMR240C SPP382Q06411 708 aaPredicted RBP6.22□□□□□ -1.41
CUS1YMR240C HRK1Q08732 759 aaKnown RBP6.22□□□□□ -1.41
CUS1YMR240C PNT1P38969 423 aa6.21□□□□□ -1.42
CUS1YMR240C RPN3P40016 523 aaKnown RBP6.21□□□□□ -1.42
CUS1YMR240C SBE2P42223 864 aaKnown RBP6.21□□□□□ -1.42
CUS1YMR240C BUD9P53226 547 aa6.21□□□□□ -1.42
CUS1YMR240C UBX5Q06682 500 aa6.21□□□□□ -1.42
CUS1YMR240C SPO21Q12411 609 aa6.21□□□□□ -1.42
CUS1YMR240C YER152CP10356 443 aa6.2□□□□□ -1.42
CUS1YMR240C GUS1P46655 708 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
CUS1YMR240C POB3Q04636 552 aaKnown RBP6.2□□□□□ -1.42
CUS1YMR240C ERR1P0CX10 437 aa6.19□□□□□ -1.42
CUS1YMR240C ERR2P0CX11 437 aa6.19□□□□□ -1.42
CUS1YMR240C TRK2P28584 889 aa6.19□□□□□ -1.42
CUS1YMR240C HBS1P32769 611 aaKnown RBP6.19□□□□□ -1.42
CUS1YMR240C MCX1P38323 520 aaPredicted RBP6.19□□□□□ -1.42
CUS1YMR240C UTP14Q04500 899 aaKnown RBP6.19□□□□□ -1.42
CUS1YMR240C GAS5Q08193 484 aa6.19□□□□□ -1.42
CUS1YMR240C AI3P03877 415 aa6.18□□□□□ -1.42
CUS1YMR240C RPL11AP0C0W9 174 aaKnown RBP6.18□□□□□ -1.42
CUS1YMR240C RSC6P25632 483 aa6.18□□□□□ -1.42
CUS1YMR240C THI4P32318 326 aa6.18□□□□□ -1.42
CUS1YMR240C CDC11P32458 415 aa6.18□□□□□ -1.42
CUS1YMR240C MNN1P39106 762 aa6.18□□□□□ -1.42
CUS1YMR240C ALT1P52893 592 aa6.18□□□□□ -1.42
CUS1YMR240C RTA1P53047 317 aa6.18□□□□□ -1.42
CUS1YMR240C TPO2P53283 614 aa6.18□□□□□ -1.42
CUS1YMR240C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
CUS1YMR240C YDL124WQ07551 312 aaKnown RBP6.18□□□□□ -1.42
CUS1YMR240C RPL11BQ3E757 174 aaPredicted RBP6.18□□□□□ -1.42
CUS1YMR240C YFL066CP43538 392 aa6.17□□□□□ -1.42
CUS1YMR240C HBN1Q96VH4 193 aa6.17□□□□□ -1.42
CUS1YMR240C RPS4AP0CX35 261 aaKnown RBP6.16□□□□□ -1.42
CUS1YMR240C RPS4BP0CX36 261 aaKnown RBP6.16□□□□□ -1.42
CUS1YMR240C DBP2P24783 546 aaKnown RBP6.16□□□□□ -1.42
CUS1YMR240C BET3P36149 193 aa6.16□□□□□ -1.42
CUS1YMR240C CCC2P38995 1004 aa6.16□□□□□ -1.42
CUS1YMR240C GPB2P39717 880 aa6.16□□□□□ -1.42
CUS1YMR240C GEM1P39722 662 aa6.16□□□□□ -1.42
CUS1YMR240C YJL045WP47052 634 aa6.16□□□□□ -1.42
CUS1YMR240C GIC2Q06648 383 aa6.16□□□□□ -1.42
CUS1YMR240C THI72Q08579 599 aa6.16□□□□□ -1.42
CUS1YMR240C PUS7Q08647 676 aaKnown RBP6.16□□□□□ -1.42
CUS1YMR240C SIT1P39980 628 aa6.15□□□□□ -1.43
CUS1YMR240C ARI1P53111 347 aaKnown RBP6.15□□□□□ -1.43
CUS1YMR240C TNA1P53322 534 aa6.15□□□□□ -1.43
CUS1YMR240C HOS3Q02959 697 aaKnown RBP6.15□□□□□ -1.43
CUS1YMR240C TPP1Q03796 238 aa6.15□□□□□ -1.43
CUS1YMR240C TDA6Q06466 467 aa6.15□□□□□ -1.43
CUS1YMR240C YDR306CQ06640 478 aa6.15□□□□□ -1.43
CUS1YMR240C ACM1Q08981 209 aa6.15□□□□□ -1.43
CUS1YMR240C MSH2P25847 964 aa6.14□□□□□ -1.43
CUS1YMR240C AAR2P32357 355 aaPredicted RBP6.14□□□□□ -1.43
CUS1YMR240C YSC84P32793 468 aa6.14□□□□□ -1.43
CUS1YMR240C NMD3P38861 518 aaKnown RBP6.14□□□□□ -1.43
CUS1YMR240C MXR1P40029 184 aa6.14□□□□□ -1.43
CUS1YMR240C IOC4Q04213 475 aa6.14□□□□□ -1.43
CUS1YMR240C DUS3Q06053 668 aaKnown RBP6.14□□□□□ -1.43
CUS1YMR240C SRP1Q02821 542 aaKnown RBP6.13□□□□□ -1.43
CUS1YMR240C YGR161W-CQ3E744 92 aa6.13□□□□□ -1.43
CUS1YMR240C SNF5P18480 905 aa6.12□□□□□ -1.43
CUS1YMR240C SLA2P33338 968 aa6.12□□□□□ -1.43
CUS1YMR240C BAP2P38084 609 aa6.12□□□□□ -1.43
CUS1YMR240C GDH3P39708 457 aa6.12□□□□□ -1.43
CUS1YMR240C EAR1Q03212 550 aa6.12□□□□□ -1.43
CUS1YMR240C COQ4O13525 335 aa6.11□□□□□ -1.43
CUS1YMR240C ADE8P04161 214 aa6.11□□□□□ -1.43
CUS1YMR240C THS1P04801 734 aaKnown RBP6.11□□□□□ -1.43
CUS1YMR240C PPH3P32345 308 aa6.11□□□□□ -1.43
CUS1YMR240C CDC12P32468 407 aaKnown RBP6.11□□□□□ -1.43
CUS1YMR240C DOM34P33309 386 aa6.11□□□□□ -1.43
CUS1YMR240C UBP6P43593 499 aaKnown RBP6.11□□□□□ -1.43
CUS1YMR240C PRY1P47032 299 aa6.11□□□□□ -1.43
CUS1YMR240C YGL081WP53156 320 aa6.11□□□□□ -1.43
CUS1YMR240C UGO1Q03327 502 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms