RNA–Protein interactions for RNA: YMR213W

CEF1, Transcript of Essential splicing factor, yeastyeast

Gene CEF1, Length 1,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CEF1YMR213W IES3Q12345 250 aa6.85□□□□□ -1.31
CEF1YMR213W OCA6Q12454 224 aa6.85□□□□□ -1.31
CEF1YMR213W VPS35P34110 944 aa6.84□□□□□ -1.31
CEF1YMR213W ETP1P38748 585 aaKnown RBP6.84□□□□□ -1.31
CEF1YMR213W SYG1P40528 902 aa6.84□□□□□ -1.31
CEF1YMR213W ENP2P48234 707 aaKnown RBP6.84□□□□□ -1.31
CEF1YMR213W PCL10P53124 433 aa6.84□□□□□ -1.31
CEF1YMR213W RMD1Q03441 430 aa6.84□□□□□ -1.31
CEF1YMR213W MGR3Q04472 501 aa6.84□□□□□ -1.31
CEF1YMR213W ATG26Q06321 1198 aa6.84□□□□□ -1.31
CEF1YMR213W SPN1Q06505 410 aaPredicted RBP6.84□□□□□ -1.31
CEF1YMR213W NOB1Q08444 459 aaKnown RBP6.84□□□□□ -1.31
CEF1YMR213W YOR238WQ08634 303 aa6.84□□□□□ -1.31
CEF1YMR213W PRP4P20053 465 aaKnown RBP6.83□□□□□ -1.32
CEF1YMR213W FAR1P21268 830 aa6.83□□□□□ -1.32
CEF1YMR213W SEC8P32855 1065 aa6.83□□□□□ -1.32
CEF1YMR213W BUD2P33314 1104 aa6.83□□□□□ -1.32
CEF1YMR213W SQT1P35184 431 aa6.83□□□□□ -1.32
CEF1YMR213W FZO1P38297 855 aa6.83□□□□□ -1.32
CEF1YMR213W YBR287WP38355 427 aa6.83□□□□□ -1.32
CEF1YMR213W REV7P38927 245 aa6.83□□□□□ -1.32
CEF1YMR213W SCS2P40075 244 aaKnown RBP6.83□□□□□ -1.32
CEF1YMR213W MDJ2P42834 146 aa6.83□□□□□ -1.32
CEF1YMR213W VTC2P43585 828 aa6.83□□□□□ -1.32
CEF1YMR213W TMA22P47089 198 aaPredicted RBP6.83□□□□□ -1.32
CEF1YMR213W SDA1P53313 767 aaKnown RBP6.83□□□□□ -1.32
CEF1YMR213W FMP30Q02883 468 aa6.83□□□□□ -1.32
CEF1YMR213W GIR2Q03768 265 aaPredicted RBP6.83□□□□□ -1.32
CEF1YMR213W SPC24Q04477 213 aa6.83□□□□□ -1.32
CEF1YMR213W SPP382Q06411 708 aaPredicted RBP6.83□□□□□ -1.32
CEF1YMR213W PSK2Q08217 1101 aa6.83□□□□□ -1.32
CEF1YMR213W YOR296WQ08748 1289 aa6.83□□□□□ -1.32
CEF1YMR213W GNT1Q12096 491 aa6.83□□□□□ -1.32
CEF1YMR213W ADE3P07245 946 aaKnown RBP6.82□□□□□ -1.32
CEF1YMR213W SEC23P15303 768 aaKnown RBP6.82□□□□□ -1.32
CEF1YMR213W GCD7P32502 381 aaPredicted RBP6.82□□□□□ -1.32
CEF1YMR213W KES1P35844 434 aaKnown RBP6.82□□□□□ -1.32
CEF1YMR213W PPX1P38698 397 aa6.82□□□□□ -1.32
CEF1YMR213W OSH3P38713 996 aaKnown RBP6.82□□□□□ -1.32
CEF1YMR213W CCC2P38995 1004 aa6.82□□□□□ -1.32
CEF1YMR213W SPO22P40511 975 aa6.82□□□□□ -1.32
CEF1YMR213W DSD1P53095 428 aa6.82□□□□□ -1.32
CEF1YMR213W COG6P53959 839 aa6.82□□□□□ -1.32
CEF1YMR213W UFD2P54860 961 aa6.82□□□□□ -1.32
CEF1YMR213W YKR005CQ02203 525 aa6.82□□□□□ -1.32
CEF1YMR213W YMR111CQ04461 462 aaPredicted RBP6.82□□□□□ -1.32
CEF1YMR213W BDF2Q07442 638 aa6.82□□□□□ -1.32
CEF1YMR213W SGT2Q12118 346 aaKnown RBP6.82□□□□□ -1.32
CEF1YMR213W RMP1Q12530 201 aa6.82□□□□□ -1.32
CEF1YMR213W BCK1Q01389 1478 aa6.82□□□□□ -1.32
CEF1YMR213W LPD1P09624 499 aaKnown RBP6.82□□□□□ -1.32
CEF1YMR213W SCJ1P25303 377 aa6.82□□□□□ -1.32
CEF1YMR213W ATG14P38270 344 aa6.82□□□□□ -1.32
CEF1YMR213W MCX1P38323 520 aaPredicted RBP6.82□□□□□ -1.32
CEF1YMR213W AIM21P40563 679 aa6.82□□□□□ -1.32
CEF1YMR213W MAD1P40957 749 aa6.82□□□□□ -1.32
CEF1YMR213W HFM1P51979 1187 aa6.82□□□□□ -1.32
CEF1YMR213W MSH6Q03834 1242 aa6.82□□□□□ -1.32
CEF1YMR213W MAG2Q06436 670 aaKnown RBP6.82□□□□□ -1.32
CEF1YMR213W VAM6Q07468 1049 aa6.82□□□□□ -1.32
CEF1YMR213W YPR204WQ08995 1032 aa6.82□□□□□ -1.32
CEF1YMR213W PET122P10355 254 aa6.81□□□□□ -1.32
CEF1YMR213W RME1P32338 300 aaKnown RBP6.81□□□□□ -1.32
CEF1YMR213W CBF2P32504 956 aa6.81□□□□□ -1.32
CEF1YMR213W ATO2P32907 282 aa6.81□□□□□ -1.32
CEF1YMR213W STE13P33894 931 aa6.81□□□□□ -1.32
CEF1YMR213W PCS60P38137 543 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
CEF1YMR213W HEK2P38199 381 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
CEF1YMR213W SSZ1P38788 538 aaKnown RBP6.81□□□□□ -1.32
CEF1YMR213W IPL1P38991 367 aa6.81□□□□□ -1.32
CEF1YMR213W ARB1P40024 610 aaKnown RBP6.81□□□□□ -1.32
CEF1YMR213W ZDS1P50111 915 aaKnown RBP6.81□□□□□ -1.32
CEF1YMR213W BNI4P53858 892 aa6.81□□□□□ -1.32
CEF1YMR213W BUD7Q08754 746 aa6.81□□□□□ -1.32
CEF1YMR213W RTP1Q12751 981 aa6.81□□□□□ -1.32
CEF1YMR213W BRR1Q99177 341 aaPredicted RBP6.81□□□□□ -1.32
CEF1YMR213W NPL4P33755 580 aa6.8□□□□□ -1.32
CEF1YMR213W RPL34BP40525 121 aaKnown RBP6.8□□□□□ -1.32
CEF1YMR213W AXL1P40851 1208 aa6.8□□□□□ -1.32
CEF1YMR213W SAP185P40856 1058 aa6.8□□□□□ -1.32
CEF1YMR213W RPA14P50106 137 aa6.8□□□□□ -1.32
CEF1YMR213W YML108WQ03759 105 aa6.8□□□□□ -1.32
CEF1YMR213W HCR1Q05775 265 aaKnown RBP6.8□□□□□ -1.32
CEF1YMR213W URB1P34241 1764 aaKnown RBP6.8□□□□□ -1.32
CEF1YMR213W ADH4P10127 382 aa6.8□□□□□ -1.32
CEF1YMR213W GRX4P32642 244 aa6.8□□□□□ -1.32
CEF1YMR213W YHL017WP38745 532 aa6.8□□□□□ -1.32
CEF1YMR213W YLF2P38746 405 aa6.8□□□□□ -1.32
CEF1YMR213W TIF4631P39935 952 aaKnown RBP6.8□□□□□ -1.32
CEF1YMR213W UBP6P43593 499 aaKnown RBP6.8□□□□□ -1.32
CEF1YMR213W MRD1Q06106 887 aaKnown RBP6.8□□□□□ -1.32
CEF1YMR213W YLH47Q06493 454 aa6.8□□□□□ -1.32
CEF1YMR213W ARG4P04076 463 aaPredicted RBP6.79□□□□□ -1.32
CEF1YMR213W TOM70P07213 617 aaKnown RBP6.79□□□□□ -1.32
CEF1YMR213W HCA4P20448 770 aaKnown RBP6.79□□□□□ -1.32
CEF1YMR213W PAP1P29468 568 aaKnown RBP6.79□□□□□ -1.32
CEF1YMR213W SEC65P29478 273 aa6.79□□□□□ -1.32
CEF1YMR213W RAD24P32641 659 aa6.79□□□□□ -1.32
CEF1YMR213W SLX5P32828 619 aaKnown RBP6.79□□□□□ -1.32
CEF1YMR213W HSP78P33416 811 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms